Team:UCL/Tests

From 2014.igem.org

(Difference between revisions)
 
(47 intermediate revisions not shown)
Line 2: Line 2:
{{:Team:UCL/Template:BioprocessStyles}}
{{:Team:UCL/Template:BioprocessStyles}}
<html>
<html>
 +
 +
<head>
 +
    <!--Accordian script taken from http://jqueryui.com/accordion/ (21/09/14, YKH), and http://stackoverflow.com/questions/5398285/jqueryui-accordion-can-i-have-more-than-one-per-page (22/09/14, YKH)-->
 +
    <meta charset="utf-8">
 +
    <title>jQuery UI Accordion - Default functionality</title>
 +
    <link rel="stylesheet" href="//code.jquery.com/ui/1.11.1/themes/smoothness/jquery-ui.css">
 +
    <script src="//code.jquery.com/jquery-1.10.2.js"></script>
 +
    <script src="//code.jquery.com/ui/1.11.1/jquery-ui.js"></script>
 +
    <link rel="stylesheet" href="/resources/demos/style.css">
 +
    <script type="text/javascript">
 +
    $(function() {
 +
        $( ".accordion" ).accordion({
 +
            collapsible: "true",
 +
        });
 +
    });
 +
    </script>
 +
</head>
 +
 +
<body>
 +
<!---
<!---
<a data-tip="true" class="top large" data-tip-content="TOOLTIP TEXT" href="javascript:void(0)"><b>VISIBLE TEXT</b></a>
<a data-tip="true" class="top large" data-tip-content="TOOLTIP TEXT" href="javascript:void(0)"><b>VISIBLE TEXT</b></a>
Line 9: Line 29:
<div id="TopGapO"></div>
<div id="TopGapO"></div>
<div id="BPimagewrapperHeader">
<div id="BPimagewrapperHeader">
-
<img src="https://static.igem.org/mediawiki/2014/9/98/UCLBiobricksHeaderOran.jpg" width="100%" height="auto" alt="BioBricks" />
+
  <img src="https://static.igem.org/mediawiki/2014/0/07/OAchievements_Bannero.jpg" width="100%" height="100%" alt="Achievements" />
</div>
</div>
Line 15: Line 35:
<!--- This is the coding for the tabs (ask sanjay before altering this) --->
<!--- This is the coding for the tabs (ask sanjay before altering this) --->
<ul class="tabs">
<ul class="tabs">
-
     <li><a href="#view1">UCL iGEM 2014</a></li>
+
     <li><a href="#view1">Bronze</a></li>
-
     <li><a href="#view2">Azoreductase R2</a></li>
+
     <li><a href="#view2">Silver</a></li>
-
     <li><a href="#view3">Azoreductase 1B6</a></li>
+
     <li><a href="#view3">Gold</a></li>
-
     <li><a href="#view4">Lignin Peroxidase</a></li>
+
     <li><a href="#view4">Special Prizes</a></li>
-
    <li><a href="#view5">BsDyP</a></li>
+
-
    <li><a href="#view6">PpDyP</a></li>
+
</ul>
</ul>
<div class="tabcontents">
<div class="tabcontents">
<!--- This is the overview section --->
<!--- This is the overview section --->
-
<div id="view1">
+
<div id="view1"><div class="textTitle"><h4>Bronze Achieved!</h4></div><br>
-
 
+
<!-- <a data-tip="true" class="top large" data-tip-content="Here's Tanel doing some pipetting in our lab!" href="javascript:void(0)" style="width: 25%;float: right;margin-left:2%"><img src="https://static.igem.org/mediawiki/2014/c/c9/UCLTANELPIPETTING.JPG" style="max-width: 100%;"></a> -->
-
<a data-tip="true" class="top large" data-tip-content="Here's Tanel doing some pipetting in our lab!" href="javascript:void(0)" style="width: 25%;float: right;margin-left:2%"><img src="https://static.igem.org/mediawiki/2014/c/c9/UCLTANELPIPETTING.JPG" style="max-width: 100%;"></a>
+
-
<div class="textTitle"><h4>Our BioBricks & how they lead to azo degradation</h4></div><br>
+
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
-
<p>We plan to create a complete synthetic azo dye decolourising device in <em>E. coli</em> which incorporates several different independent enzymes that act on azo dyes and their breakdown products. After evaluating their individual breakdown characteristics, we aim to investigate the potential synergistic action of these enzymes in a single synthetic <em>E. coli</em> device and design a <a data-tip="true" class="top large" data-tip-content="We developed a novel platform for industrial scale sustainable bioremediation." href="https://2014.igem.org/Team:UCL/Science/Bioprocessing"><b>bioprocess</b></a> which could be used to upscale the method to an industrial context. </p>
+
<p>EDO WRITE THINGS HERE</p><br>
-
<a data-tip="true" class="top large" data-tip-content="Can you guess which one is the RFP BioBrick?" href="javascript:void(0)" style="width: 20%;float: left;margin-top:2%; margin-right:2%"><img src="https://static.igem.org/mediawiki/2014/c/c0/UCLTANELHOLDINGBIOBRICK.jpg" style="max-width: 100%;"></a>
+
    <font size="2">
-
<br>
+
    <table width="100%" height="auto">
-
In an industrial setting, these enzymes would work sequentially in a bioreactor with preset dynamic conditions. First, azoreductase will <a data-tip="true" class="top large" data-tip-content="Via a double reduction using NADPH as a cofactor." href="javascript:void(0)"><b>cleave the azo-bond (N=N)</b></a>, producing a series of highly toxic aromatic amines. Then, these compounds will be oxidised by lignin peroxidase, laccase and bacterial peroxidases, completing decolourisation and decreasing <a data-tip="true" class="top large" data-tip-content="To the point that the final products of the process are less toxic than the intact dyes themselves." href="javascript:void(0)"><b>toxicity levels</b></a>.
+
        <thead>
-
<br><br>
+
            <tr>
-
The complementary action of azoreductase, lignin peroxidase, laccase, and bacterial peroxidases will be studied in order to find out the best possible approach of sequential reaction, and this core degradation module will be extrapolated to other areas such as BioArt projects and work on <a data-tip="true" class="top large" data-tip-content="Trying to set up the foundations for a synthetic ecology." href="javascript:void(0)"><b>algal-bacterial symbiosis</b></a>.<br><br><br></p>
+
                <th>  </th>
 +
                <th> Task </th>
 +
                <th> Where am I on wiki? </th>
 +
                <th> Where am I on iGEM? </th>
 +
            </tr>
 +
        </thead>
 +
        <tbody>
 +
            <!--Lisbon plasmids-->
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e0/UCL_Bronze-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Team registration </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Humans/Team">Meet our Team!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/Team.cgi?id=1336">Team Roster!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e0/UCL_Bronze-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Complete Judging form </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Project/Achievements">Our Achievements!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/2014_Judging_Form?id=1336">iGEM Judging form!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e0/UCL_Bronze-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Team Wiki </td>
 +
                <td> &nbsp;<a href="/Team:UCL">Team wiki!</a> </td>
 +
                <td> &nbsp;<a href="www.goodbyeazodye.org.uk">See us here also!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e0/UCL_Bronze-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;We will present our project poster and talk at the iGEM Giant Jamboree, 30 October - 3 November 2014 </td>
 +
                <td> &nbsp;<a href="/Team:UCL">...</a> </td>
 +
                <td> &nbsp;<a href=" ">...</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e0/UCL_Bronze-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Use of new/improved application of previously existing standard BioBrick Part or Device, and submitted to the iGEM Registry </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Project/Biobricks">...</a> </td>
 +
                <td> &nbsp;<a href=" ">...</a> </td>
 +
            </tr>
 +
        </tbody>
 +
    </table>
 +
    </font>
</div>
</div>
<!--- This is the first biobrick --->
<!--- This is the first biobrick --->
-
<div id="view2"><div class="textTitle"><h4>Azoreductase R2 (BBa_K1336000)</h4></div><br>
+
<div id="view2"><div class="textTitle"><h4>Silver Achieved!</h4></div><br>
-
<!-- This is the biobrick image -->
+
-
<a data-tip="true" class="top large" data-tip-content="This diagram explains the basic construct of the BioBrick, the only part that changes is the selected function itself; in this case attributed to BBa_K1336000." href="javascript:void(0)" style="width: 30%;float: right;margin-left:2%"><img src="https://static.igem.org/mediawiki/2014/d/dd/BBa_K1336000.png" style="max-width: 100%;"></a>
+
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
-
<p>This non-specific enzyme was isolated from <em>Bacillus subtilis</em>, although it is also found in <a data-tip="true" class="top large" data-tip-content="Including those inhabiting the human intestine!" href="javascript:void(0)"><b>other bacterial species</b></a>. It starts the degradation of azo dyes by cleaving the <a data-tip="true" class="top large" data-tip-content="A bond composed of two nitrogens linked by a double bond (N=N), characteristic of all azo dyes." href="javascript:void(0)"><b>azo bond</b></a>. <br><br>The products of this cleavage varies greatly among different dyes, but are generally aromatic amines. This azo cleavage does not only occur with azo dyes, but also with other molecules like <a data-tip="true" class="top large" data-tip-content="A drug that is broken down in the gut to release compounds that fight bowel disease and arthritis." href="javascript:void(0)"><b>Sulfasalazine</b></a>. We will isolate this enzyme from <em>B. subtilis</em> and convert it to BioBrick format via polymerase chain reaction (PCR).</p><br><br>
+
<p>EDO WRITE THINGS HERE</p><br>
 +
    <font size="2">
 +
    <table width="100%" height="auto">
 +
        <thead>
 +
            <tr>
 +
                <th>  </th>
 +
                <th> Task </th>
 +
                <th> Where am I on wiki? </th>
 +
                <th> Where am I on iGEM? </th>
 +
            </tr>
 +
        </thead>
 +
        <tbody>
 +
            <!--Lisbon plasmids-->
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e8/UCL_Silver-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Experimental validation that at least one of our new Biobrick Part(s) or Device(s) works as expected. </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Humans/Team">Meet our Team!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/Team.cgi?id=1336">Team Roster!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e8/UCL_Silver-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Characterisation of working Biobrick(s) documented in the "Main Page" section of its Part's/Device's Registry Entry. </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Project/Achievements">Our Achievements!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/2014_Judging_Form?id=1336">iGEM Judging form!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e8/UCL_Silver-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;New part submitted to iGEM Parts Registry (adhering to the iGEM Registry guidelines). </td>
 +
                <td> &nbsp;<a href="/Team:UCL">Team wiki!</a> </td>
 +
                <td> &nbsp;<a href="www.goodbyeazodye.org.uk">See us here also!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/e/e8/UCL_Silver-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Implications of our project to the environment, security, safety and ethics, and/or ownership and sharing. Also, description of one or more ways these, or broader, implications have been taken into consideration in the design and execution of our project. </td>
 +
                <td> &nbsp;<a href="/Team:UCL">...</a> </td>
 +
                <td> &nbsp;<a href=" ">...</a> </td>
 +
            </tr>
 +
        </tbody>
 +
    </table>
 +
    </font>
</div>
</div>
<!--- This is the second biobrick --->
<!--- This is the second biobrick --->
-
<div id="view3"><div class="textTitle"><h4>Azoreductase 1B6 (BBa_K1336001)</h4></div><br>
+
<div id="view3"><div class="textTitle"><h4>Gold Achieved!</h4></div><br>
-
<!-- This is the biobrick image -->
+
-
<a data-tip="true" class="top large" data-tip-content="This diagram explains the basic construct of the BioBrick, the only part that changes is the selected function itself; in this case attributed to BBa_K1336001." href="javascript:void(0)" style="width: 30%;float: right;margin-left:2%"><img src="https://static.igem.org/mediawiki/2014/5/5d/UCLBBAzo1b6.png" style="max-width: 100%;"></a>
+
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
-
<p>Another azoreductase that we will be using is isolated from <em>Pseudomonas aeruginosa</em>. It functions in the same way as Azoreductase R1 - cleaving the azo bond - but it is intended to work complementary with it, in order to cover a wider spectrum of dyes more efficiently. <br><br>Like the previous azoreductase, this BioBrick will be constructed using PCR. A promoter and a ribosomal binding site (RBS) will then be added to create a functioning composite device. </p><br>
+
<p>EDO WRITE THINGS HERE</p><br>
 +
    <font size="2">
 +
    <table width="100%" height="auto">
 +
        <thead>
 +
            <tr>
 +
                <th>  </th>
 +
                <th> Task </th>
 +
                <th> Where am I on wiki? </th>
 +
                <th> Where am I on iGEM? </th>
 +
            </tr>
 +
        </thead>
 +
        <tbody>
 +
            <!--Lisbon plasmids-->
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/3/36/UCL_Gold-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Improve the function OR characterization of an existing BioBrick Part or Device, document this in the "Experience" section of its entry in the iGEM Registry, and submit the part to the iGEM Parts Registry. </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Humans/Team">Meet our Team!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/Team.cgi?id=1336">Team Roster!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/3/36/UCL_Gold-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Help any registered iGEM team from another school or institute, e.g. characterising a part, debugging a construct, or modelling/simulating their system. </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Project/Achievements">Our Achievements!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/2014_Judging_Form?id=1336">iGEM Judging form!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/3/36/UCL_Gold-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Describe a novel approach of our team to help us and others consider the implications/aspects of the design and outcomes of synthetic biology efforts; justifying its novelty and how this approach might be adapted and scaled for others to use. </td>
 +
                <td> &nbsp;<a href="/Team:UCL">Team wiki!</a> </td>
 +
                <td> &nbsp;<a href="www.goodbyeazodye.org.uk">See us here also!</a> </td>
 +
            </tr>
 +
        </tbody>
 +
    </table>
 +
    </font>
</div>
</div>
<!--- This is the third biobrick --->
<!--- This is the third biobrick --->
-
<div id="view4"><div class="textTitle"><h4><a name="BBa_K1336003"><span>Lignin Peroxidase (BBa_K1336003)</span></a></h4></div><br>
+
<div id="view4"><div class="textTitle"><h4>Special Awards</h4></div><br>
-
<a data-tip="true" class="top large" data-tip-content="This diagram explains the basic construct of the BioBrick, the only part that changes is the selected function itself; in this case attributed to BBa_K1336003." href="javascript:void(0)" style="width: 30%;float: right;margin-left:2%"><img src="https://static.igem.org/mediawiki/2014/7/78/UCLBBLigningperoxidase.png" style="max-width: 100%;"></a>
+
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
-
<p>Usually found in white-rot fungi species, its main function in nature is to participate in lignin-degrading processes by these organisms. However, it has also been found to play a role in <a data-tip="true" class="top large" data-tip-content="Using oxidative processes." href="javascript:void(0)"><b>azo dye degradation and decolourisation</b></a>. <br><br>This enzyme, like laccase, would be incorporated in the second step of the reaction to oxidise the products of the azo bond cleavage, in order to achieve greater detoxification. The sequence for the enzyme will be ordered and synthesised, including the BioBrick prefix and suffix. Again, it will function together with a promoter and a RBS.</p><br>
+
<p>EDO WRITE THINGS HERE</p><br>
 +
    <font size="2">
 +
    <table width="100%" height="auto">
 +
        <thead>
 +
            <tr>
 +
                <th>  </th>
 +
                <th> Task </th>
 +
                <th> Where am I on wiki? </th>
 +
                <th> Where am I on iGEM? </th>
 +
            </tr>
 +
        </thead>
 +
        <tbody>
 +
            <!--Lisbon plasmids-->
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/3/36/UCL_Gold-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Best Supporting Art and Design </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Humans/Team">Meet our Team!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/Team.cgi?id=1336">Team Roster!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/3/36/UCL_Gold-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Best Policy and Practice Advance </td>
 +
                <td> &nbsp;<a href="/Team:UCL/Project/Achievements">Our Achievements!</a> </td>
 +
                <td> &nbsp;<a href="https://igem.org/2014_Judging_Form?id=1336">iGEM Judging form!</a> </td>
 +
            </tr>
 +
            <tr>
 +
                <td> <center><img src="https://static.igem.org/mediawiki/2014/3/36/UCL_Gold-metal-star.jpg" width="25px"></center> </td>
 +
                <td> &nbsp;Best Supporting Software </td>
 +
                <td> &nbsp;<a href="/Team:UCL">Team wiki!</a> </td>
 +
                <td> &nbsp;<a href="www.goodbyeazodye.org.uk">See us here also!</a> </td>
 +
            </tr>
 +
        </tbody>
 +
    </table>
 +
    </font>
 +
   
 +
    <div>
 +
        <div><img src="https://static.igem.org/mediawiki/2014/e/e0/UCL_Bronze-metal-star.jpg" width="50px">
 +
        <ul>
 +
        <br>Bronze Medal<br><ul>
 +
            <li> We <a href="https://igem.org/Team.cgi?id=1336">registered</a> our team!</li></br>
 +
            <li> We have completed the <a href="https://igem.org/2014_Judging_Form?id=1336">Judging form!</a></li><br>
 +
            <li> Our team <a href="/Team:UCL">wiki</a> is here!</li><br>
 +
            <li> We have prepared a Poster and a Talk for the iGEM Giant Jamboree!</li><br>
 +
            <li> Our team <a href="/Team:UCL/Humans/Team">attributions</a> can be found here, with our <a href="/Team:UCL/Humans/Collab">external collaborators</a>, and <a href="/Team:UCL/Humans/Sponsor">sponsors</a></li><br>
 +
            <li> Our new <a href="/Team:UCL/Project/Biobrick">BioBrick Parts and Devices</a> have been assembled, characterised, and documented!</li>
 +
        </ul>
 +
        </div>
 +
        <div><img src="https://static.igem.org/mediawiki/2014/e/e8/UCL_Silver-metal-star.jpg" width="50px">
 +
            <ul>
 +
            <br>Silver Medal<br><ul>
 +
                <li> Our new BioBrick Parts and Devices have been <a href="/Team:UCL/Science/Results">experimentally validated</a>, and work as expected!</li></br>
 +
                <li> We documented the characterisation of these parts in the iGEM Parts Registry: <a href="http://parts.igem.org/Part:BBa_K1336003">BBa_1366003</a>, <a href="http://parts.igem.org/Part:BBa_K1336005">BBa_1366005</a>, <a href="http://parts.igem.org/Part:BBa_K1336006">BBa_1366006</a>, <a href="http://parts.igem.org/Part:BBa_K1336007">BBa_1366007</a>.</li><br>
 +
                <li> We submitted those new parts to the iGEM Parts Registry.</li><br>
 +
                <li> We discussed how our project could have implications for the environment, security, safety, ethics, ownership and data sharing. Find out more about this in our <a href="/Team:UCL/Humans/Soci">Sociological Imaginations</a> page!</li>
 +
            </ul>
 +
        </div>
 +
        <div><img src="https://static.igem.org/mediawiki/2014/3/36/UCL_Gold-metal-star.jpg" width="50px">
 +
            <ul>
 +
            <br>Gold Medal<br><ul>
 +
                <li> We <b>improved</b> the function and characterisation of existing <a href="/Team:UCL/Science/Experiment">BioBrick Parts</a>, and entered this new information into the Registry. However, this has not been submitted to the registry.</li></br>
 +
                <li> We <a href="/Team:UCL/Humans/Collab">collaborated</a> with other registered iGEM teams.</li><br>
 +
                <li> We outlined and detailed a new approach to tack the issues of <a href="/Team:UCL/Project/Xenobiology">biosafety</a> in the field of Synthetic Biology. We also explained our <https://2014.igem.org/Team:UCL/Humans/Story>story</a>...</li><br>
 +
            </ul>
 +
        </div>
 +
    </div>
</div>
</div>
-
<!--- This is the fourth biobrick --->
 
-
<div id="view5"><div class="textTitle"><h4><a name="BBa_K1336004"><span><em>Bacillus subtilis</em> dye-decolorizing peroxidase (BsDyP) (BBa_K1336004)</span></a></h4></div><br>
 
-
<a data-tip="true" class="top large" data-tip-content="This diagram explains the basic construct of the BioBrick, the only part that changes is the selected function itself; in this case attributed to BBa_K1336004." href="javascript:void(0)" style="width: 30%;float: right;margin-left:2%"><img src="https://static.igem.org/mediawiki/2014/a/ad/UCLBBBsdyp.png" style="max-width: 100%;"></a>
 
-
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
 
-
<p>Found in <em>B. subtilis</em>, the physiological function of this newly discovered enzyme is still unclear, although it has shown effectiveness in degrading lignin and azo dyes, which makes it useful for us. It is not as effective as PpDyP for most compounds, but very efficient in degrading ABTS (2,2'-azino-bis(3-ethylbenzthiazoline-6-sulphonic acid)). <br><br>The BioBrick will be constructed via PCR.</p><br><br><br><br>
 
-
</div>
 
-
<!--- This is the fifth biobrick --->
 
-
<div id="view6"><div class="textTitle"><h4><a name="BBa_K1336005"><span><em>Pseudomonas putida</em> MET94 dye-decolorizing peroxidase (PpDyP) (BBa_K1336005)</span></a></h4></div><br>
 
-
<a data-tip="true" class="top large" data-tip-content="This diagram explains the basic construct of the BioBrick, the only part that changes is the selected function itself; in this case attributed to BBa_K1336005." href="javascript:void(0)" style="width: 30%;float: right;margin-left:2%"><img src="https://static.igem.org/mediawiki/2014/9/9c/UCLBBPpdyp.png" style="max-width: 100%;"></a>
 
-
<!-- This is the main text. Anything in a <p>TEXT</p> is a paragraph and will be spaced appropriately-->
 
-
<p>This enzyme is found in <em>P. putida</em>. Although it is relatively novel, and has not yet been studied in detail, it seem to be an extremely versatile and powerful biocatalyst; it oxidises a wide <a data-tip="true" class="top large" data-tip-content="Such as azo dyes, anthraquinones, phenolic compounds, manganese or veratryl alcohol." href="javascript:void(0)"><b>variety of substrates</b></a> very efficiently. This will broaden the <a data-tip="true" class="top large" data-tip-content="Going further just azo dyes!" href="javascript:void(0)"><b>spectrum of action</b></a> of our decolourising device, and thus being able to degrade other toxic compounds typically found in industrial wastewaters. <br><br>This BioBrick will be constructed via PCR.</p><br>
 
</div>
</div>
 +
 +
 +
</div>
</div>
Line 125: Line 304:
width:100%;
width:100%;
}
}
 +
.label-warning {
 +
    background: #ffffe0;
 +
    width: 100%;
 +
    height: 100%;
 +
    padding: 5px 10px;
 +
}
 +
/*table, th, td {
 +
  border: 1px solid black;
 +
}*/
/*=========Object Alignment Classes=============*/
/*=========Object Alignment Classes=============*/
.alignright {
.alignright {
Line 175: Line 363:
background: black;
background: black;
}
}
 +
 +
/*========Accordian======*/
 +
.accordion {
 +
    font-size: 18px;
 +
}
 +
 +
</style>
</style>
-
+
 
 +
</body>
 +
 
</html>
</html>
{{:Team:UCL/Template:footerx}}
{{:Team:UCL/Template:footerx}}

Latest revision as of 21:03, 17 October 2014

Goodbye Azodye UCL iGEM 2014

jQuery UI Accordion - Default functionality
Achievements

Bronze Achieved!


EDO WRITE THINGS HERE


Task Where am I on wiki? Where am I on iGEM?
 Team registration  Meet our Team!  Team Roster!
 Complete Judging form  Our Achievements!  iGEM Judging form!
 Team Wiki  Team wiki!  See us here also!
 We will present our project poster and talk at the iGEM Giant Jamboree, 30 October - 3 November 2014  ...  ...
 Use of new/improved application of previously existing standard BioBrick Part or Device, and submitted to the iGEM Registry  ...  ...

Silver Achieved!


EDO WRITE THINGS HERE


Task Where am I on wiki? Where am I on iGEM?
 Experimental validation that at least one of our new Biobrick Part(s) or Device(s) works as expected.  Meet our Team!  Team Roster!
 Characterisation of working Biobrick(s) documented in the "Main Page" section of its Part's/Device's Registry Entry.  Our Achievements!  iGEM Judging form!
 New part submitted to iGEM Parts Registry (adhering to the iGEM Registry guidelines).  Team wiki!  See us here also!
 Implications of our project to the environment, security, safety and ethics, and/or ownership and sharing. Also, description of one or more ways these, or broader, implications have been taken into consideration in the design and execution of our project.  ...  ...

Gold Achieved!


EDO WRITE THINGS HERE


Task Where am I on wiki? Where am I on iGEM?
 Improve the function OR characterization of an existing BioBrick Part or Device, document this in the "Experience" section of its entry in the iGEM Registry, and submit the part to the iGEM Parts Registry.  Meet our Team!  Team Roster!
 Help any registered iGEM team from another school or institute, e.g. characterising a part, debugging a construct, or modelling/simulating their system.  Our Achievements!  iGEM Judging form!
 Describe a novel approach of our team to help us and others consider the implications/aspects of the design and outcomes of synthetic biology efforts; justifying its novelty and how this approach might be adapted and scaled for others to use.  Team wiki!  See us here also!

Special Awards


EDO WRITE THINGS HERE


Task Where am I on wiki? Where am I on iGEM?
 Best Supporting Art and Design  Meet our Team!  Team Roster!
 Best Policy and Practice Advance  Our Achievements!  iGEM Judging form!
 Best Supporting Software  Team wiki!  See us here also!

    Silver Medal
    • Our new BioBrick Parts and Devices have been experimentally validated, and work as expected!

    • We documented the characterisation of these parts in the iGEM Parts Registry: BBa_1366003, BBa_1366005, BBa_1366006, BBa_1366007.

    • We submitted those new parts to the iGEM Parts Registry.

    • We discussed how our project could have implications for the environment, security, safety, ethics, ownership and data sharing. Find out more about this in our Sociological Imaginations page!

    Gold Medal
    • We improved the function and characterisation of existing BioBrick Parts, and entered this new information into the Registry. However, this has not been submitted to the registry.

    • We collaborated with other registered iGEM teams.

    • We outlined and detailed a new approach to tack the issues of biosafety in the field of Synthetic Biology. We also explained our story...

Contact Us

University College London
Gower Street - London
WC1E 6BT
Biochemical Engineering Department
Phone: +44 (0)20 7679 2000
Email: ucligem2014@gmail.com

Follow Us

Retrieved from "http://2014.igem.org/Team:UCL/Tests"