Team:UC Davis

From 2014.igem.org

(Difference between revisions)
 
(76 intermediate revisions not shown)
Line 1: Line 1:
 +
{{Team:UC_Davis/Head}}
 +
{{Team:UC_Davis/projectMenu}}
<html>
<html>
-
    <head>  
+
<head>
-
        <title> UC Davis iGEM 2014 </title>  
+
<link href="//fonts.googleapis.com/css?family=PT+Sans:400italic,400,700italic,700" rel="stylesheet" type="text/css">
-
        <style>
+
</head>
-
/* Random CSS */
+
<body>
-
              a.white:link {color:#FFF;}      /* unvisited link */
+
<div>
-
              a.white:visited {color:#FFF;}  /* visited link */
+
<img src="https://static.igem.org/mediawiki/2014/2/2f/Oliview_UCD_Banner_1.png" class="banner" width="967px" height="226/">
-
              a.white:hover {color:#FFF;}  /* mouse over link */
+
</div>
-
              a.white:active {color:#FFF;}  /* selected link */  
+
<!--Project Menu Start-->
 +
<div class="mainTitleHeader">
 +
<p class="centertext"><a href="https://2014.igem.org/Team:UC_Davis/Project_Overview">
 +
Project Overview</a>
 +
</p>
 +
</div>
-
              a{color:#909090}
+
<div class="floatboxProjectMenu">
 +
<a href="https://2014.igem.org/Team:UC_Davis/Policy_Practices_Overview"><div class="polPrac"></div></a/>
 +
<a href="https://2014.igem.org/Team:UC_Davis/Protein_Engineering"><div class="ProEng"></div></a/>
 +
<a href="https://2014.igem.org/Team:UC_Davis/Electrochemistry"><div class="Electro"></div></a/>
 +
<a href="https://2014.igem.org/Team:UC_Davis/Potentiostat_Design"><div class="menuPStat"></div></a/>
 +
<a href="https://2014.igem.org/Team:UC_Davis/Signal_Processing"><div class="sProcessing"></div></a/>
 +
</div>
 +
<!--Project Menu End-->
-
              a:visited{color:#909090}
+
<div class="mainTitleHeader">
 +
<p class="centertext">
 +
OliView: An Enzyme Based Electrochemical Biosensor Developed for Olive Oil Quality Control
 +
</p>
 +
</div>
-
/* END Random CSS */
+
<div class="mainContainer">
 +
<a href="https://2014.igem.org/Team:UC_Davis/Policy_Practices_Overview">
 +
<img src="https://static.igem.org/mediawiki/2014/4/43/UCDavis2014_Paper_Cover.png" class="genpicfloatleft" width="350px"></img>
 +
</a>
 +
<p>
 +
In a report conducted by the UC Davis Olive Oil Center, it was found that more than 65% of the extra virgin olive oil on shelves around the US is defective due to poor handling or deliberate adulteration with extraneous, non-beneficial oils. The most prevalent and identifying defect in olive oil is rancidity, indicating the absence of expected health benefits such as antioxidants and polyunsaturated fats. This summer, we engineered a biosensor capable of quickly and cheaply evaluating rancidity defects in the chemical profile of olive oil, providing both consumers and retailers with a means of ensuring product quality.<br><br>
 +
The project consisted of four components: Protein Engineering, Electrochemistry, Development of a user friendly potentiostat and signal processing. We were able to provide proof of concept for each component  of our device. With each component combined,  we had a fully functional electrochemical biosensor that could distinguish rancid olive oil from fresh. <br><br>
-
/* Begin Nav CSS */
+
<a href="https://static.igem.org/mediawiki/2014/0/07/UC_Davis_iGEM_2014_Practical_Implications_for_the_Development_and_Deployment_of_Engineered_Biosensors_in_Olive_Oil_Production.pdf" class="brightlink">Read full version of our practice and policy report</a><br>
 +
</p>
 +
</div>
-
              .nav, .nav ul {
 
-
              margin: 0;
 
-
                      margin-bottom: 10px;
 
-
              padding: 0;
 
-
              list-style: none;
 
-
              line-height: 1;
 
-
              z-index: 9999999;
 
-
              }
 
-
              /* The top navigation menu */
+
</body>
-
              .nav {
+
-
              /* Layout & positioning */
+
-
              display: block;
+
-
              position: relative;
+
-
              width: 967px; /*1000px*/
+
-
              height: 43px;
+
-
                      border-radius:4px;
+
-
 
+
-
              /* Background & effects */
+
-
              background: #232323; /* Background for Internet Explorer 9 and older browsers */
+
-
 
+
-
              }
+
-
 
+
-
              /* The link containers */
+
-
              .nav>li {
+
-
              display: block;
+
-
              float:left;
+
-
              position: relative;
+
-
              margin: 0;
+
-
              padding: 0;
+
-
+
-
              }
+
-
 
+
-
              /* The main navigation links */
+
-
              .nav>li>a {
+
-
              /* Layout & positioning */
+
-
              display: block;
+
-
              width: 159.1px; /* 198 */
+
-
                      padding: 15px 0px;
+
-
 
+
-
              /* Typography */
+
-
              font-family: Arial, san-serif;
+
-
              font-size: 20px;
+
-
                    font-weight: normal;
+
-
              text-decoration: none;
+
-
              color: rgba(255, 255, 255, .9);
+
-
              text-shadow: 0 1px 0 #2a2a2a;
+
-
              text-align: center;
+
-
 
+
-
              /* Chaning the background on hover with a smooth transition */
+
-
              -webkit-transition: background .35s linear;
+
-
              -moz-transition: background .35s linear;
+
-
              -ms-transition: background .35s linear;
+
-
              -o-transition: background .35s linear;
+
-
              transition: background .35s linear;
+
-
              }
+
-
 
+
-
              /* Centering dotted line dividers */
+
-
              .leftbookend {
+
-
                      border-right: 1px dotted #393939;
+
-
              }
+
-
             
+
-
              .rightbookend {
+
-
                      border-left: 1px dotted #595959;
+
-
              } 
+
-
 
+
-
              /* Chaning the background on hover */
+
-
              .nav>li>a:hover, .nav>li:hover>a {
+
-
              background: rgba(255, 255, 255, .9);
+
-
              color: #000;
+
-
              }
+
-
 
+
-
              .nav>li:first-child a {
+
-
              border-top-left-radius: 3px;
+
-
              }
+
-
 
+
-
 
+
-
 
+
-
              .arrow:hover {
+
-
                  -moz-transition-duration: 3000s;
+
-
                  -ms-transition-duration: 3000s;
+
-
                  -o-transition-duration: 3000s;
+
-
                  -webkit-transition-duration: 3000s;
+
-
                  transition-duration: 3000s;
+
-
              }
+
-
 
+
-
 
+
-
              /* General styling for the submenus */
+
-
              .nav ul {
+
-
              display: block;
+
-
              position: absolute;
+
-
              left: -9999px;
+
-
              text-align: center;
+
-
              box-shadow: 0 1px 2px rgba(0, 0, 0, .15);
+
-
+
-
              }
+
-
 
+
-
              /* Level 1 submenus */
+
-
              .nav>li>ul {
+
-
              cursor: pointer;
+
-
              padding-top: 0px;
+
-
              z-index: 200;
+
-
              top: 43px;
+
-
              }
+
-
 
+
-
              /* Making the level 1 submenu to appear on hover */
+
-
              .nav>li:hover>ul {
+
-
              left: 0px;
+
-
              }
+
-
 
+
-
 
+
-
              /* The submenu link containers */
+
-
              .nav ul li {
+
-
              position: relative;
+
-
              display: block;
+
-
+
-
              /* Creating the slide effect. The list elements which contain the links have 0 height. On hover, they will expand */
+
-
              height: 0px;
+
-
              -webkit-transition: height .2s;
+
-
              -moz-transition: height .2s;
+
-
              -o-transition: height .2s;
+
-
              -ms-transition: height .2s;
+
-
              }
+
-
 
+
-
              /* Expanding the list elements which contain the links */
+
-
              .nav li:hover>ul>li {
+
-
              height: 24px;
+
-
              }
+
-
 
+
-
              .nav>li:hover>ul>li:first-child {
+
-
              height: 27px;
+
-
              }
+
-
 
+
-
              .nav>li>ul>li:first-child>a {
+
-
              border-top: 3px solid #fff;
+
-
              }
+
-
 
+
-
              .nav>li>ul>li.dropdown:first-child>ul {
+
-
                    top: 3px;
+
-
              }
+
-
 
+
-
              /* The links of the submenus */
+
-
              .nav ul li a {
+
-
              /* Layout */
+
-
              display: block;
+
-
              width: 127px; /* 169 */
+
-
              padding: 6px 12px 6px 20px;
+
-
 
+
-
              /* Typography */
+
-
              font-size: 13px;
+
-
              color: #01406e;
+
-
              font-family: Arial, san-serif;
+
-
              text-decoration: none;
+
-
              background: #f0f0f0;
+
-
 
+
-
              /* Every change to the links (background, color etc) will be made with a smooth transition */
+
-
              -webkit-transition: all .2s;
+
-
              -moz-transition: all .2s;
+
-
              -ms-transition: all .2s;
+
-
              -o-transition: all .2s;
+
-
              transition: all .2s;
+
-
              }
+
-
 
+
-
              .nav>li>ul>li:first-child>a::before {
+
-
              content: "";
+
-
              display: block;
+
-
              position: absolute;
+
-
              text-align: center;
+
-
              width: 100%;
+
-
              height: 12px;
+
-
              background: transparent;
+
-
              top: -8px;
+
-
              left: 0;
+
-
              z-index: 9999;
+
-
              }
+
-
 
+
-
              /* The hover state of the links */
+
-
              .nav ul li:hover>a, .nav ul li>a:hover {
+
-
              background: #c8c8c8; /*e7e7e7 */
+
-
              color: #000000;
+
-
              }
+
-
 
+
-
              /* Changing the color of the arrow on hover */
+
-
              .nav ul>.dropdown:hover>a::after, .nav ul>.dropdown>a:hover::after {
+
-
              border-left-color: #fff;
+
-
              }
+
-
 
+
-
              .nav>li>ul>li
+
-
              {
+
-
                      margin-bottom: 0
+
-
              }
+
-
 
+
-
 
+
-
              .nav>li:first-child:hover>ul
+
-
              {
+
-
                      left:0px;
+
-
              }
+
-
 
+
-
              .nav>li:last-child:hover>ul
+
-
              {
+
-
                    left: 0px;
+
-
              }
+
-
 
+
-
              .tableCSS
+
-
              {
+
-
                    background-color:#ffffff;
+
-
                    width:1000px;
+
-
              }
+
-
 
+
-
/* END Nav CSS */
+
-
 
+
-
      </style>
+
-
<style type="text/css">
+
-
 
+
-
              /* Hiding default wiki displays: Credits to TU-Delft and Groningen for the code! */
+
-
              #globalWrapper {
+
-
                    background-color: rgba(255,255,255,1);
+
-
                    background-image: url('https://static.igem.org/mediawiki/2013/8/85/UC_Davis_13_DNA-background.jpg');
+
-
                    background-size: 100%;
+
-
                    background-repeat: no-repeat;
+
-
                    background-attachment:fixed;
+
-
                    font-family: arial, times;
+
-
                 
+
-
              }
+
-
 
+
-
              #content {
+
-
                    position: relative;
+
-
                    width: 967px;
+
-
                    padding: 0px 0px 0px 0px;
+
-
                    border: none;
+
-
                    color: black;
+
-
                    line-height: 1.5em;
+
-
                    z-index: 2;
+
-
              }
+
-
 
+
-
              #catlinks {
+
-
                    visibility:hidden;
+
-
              }
+
-
 
+
-
              #bodyContent {
+
-
                    background-image: url('http://biobm.com/images/DNA-background.jpg');
+
-
                    background-size: 100%;
+
-
                    background-repeat: no-repeat;
+
-
                    background-attachment:fixed;
+
-
                    font-family: arial, times;
+
-
                    width:100%;
+
-
                    color:#ffffff;
+
-
              }
+
-
 
+
-
              .partsreglink:link {
+
-
                    color:#33ee33;
+
-
              }
+
-
              .partsreglink:visited {
+
-
                    color:#33ee33;
+
-
              }
+
-
 
+
-
              #top-section {
+
-
                    height: 20px;
+
-
                    background-color: rgba(255,255,255,0);
+
-
                    margin-left: auto;
+
-
                    width: 99%;
+
-
                    margin-right: auto;
+
-
                    margin-bottom: 10px;
+
-
                    margin-top: 3px;
+
-
                    border-bottom: 20px;
+
-
              }
+
-
 
+
-
              #p-logo {
+
-
                    height:0px;
+
-
                    overflow:hidden;
+
-
                    display:none;
+
-
              }
+
-
              .firstHeading {
+
-
                    display: none;
+
-
              }
+
-
              #footer-box {
+
-
                    background-color: transparent;
+
-
                    border: none;
+
-
                    width: 1000px;
+
-
                    margin: 0 auto;
+
-
                    padding: 0;
+
-
              }
+
-
              #search-controls {
+
-
                    display: none;
+
-
              }
+
-
</style>
+
-
    </head>
+
-
       
+
-
    <body>
+
-
        <ul class="nav">
+
-
              <li class="dropdown leftbookend">
+
-
                    <a href="/Team:UC_Davis" style="font-size:13px;">Home</a>
+
-
      </li>
+
-
      <li class="dropdown leftbookend rightbookend">
+
-
                    <a href="https://2014.igem.org/Team:UC_Davis/Team_Overview" style="font-size:13px;">Team</a>
+
-
                    <ul>
+
-
                            <li><a href="https://2014.igem.org/Team:UC_Davis/Team_Overview">Overview</a></li>
+
-
                            <li><a href="https://2014.igem.org/Team:UC_Davis/Bios">Bios</a></li>
+
-
    <li><a href='/Team:UC_Davis/Contact'>Contact Us</a></li>
+
-
                    <li><a href="https://igem.org/Team.cgi?id=1212">Official Team Profile</a></li>
+
-
                    </ul>
+
-
        </li>
+
-
<li class="dropdown leftbookend rightbookend">
+
-
<a href="https://2014.igem.org/Team:UC_Davis/Project_Overview" style="font-size:13px;">Project</a>
+
-
<ul>
+
-
<li><a href="https://2014.igem.org/Team:UC_Davis/Project_Overview">Overview</a></li>
+
-
                                <li><a href="/Team:UC_Davis/Modeling">Modeling</a></li>
+
-
<li><a href='/Team:UC_Davis/Assembly'>Assembly</a></li>
+
-
<li><a href='/Team:UC_Davis/Parts'>Parts</a></li>
+
-
<li><a href='/Team:UC_Davis/Safety'>Safety</a></li>
+
-
</ul>
+
-
</li>
+
-
<li class="dropdown leftbookend rightbookend">
+
-
<a href="/Team:UC_Davis/Data" style="font-size:13px;">Data</a>
+
-
                        <ul>
+
-
                        <li><a href="/Team:UC_Davis/Data">Testing Constructs</a></li>
+
-
<li><a href="/Team:UC_Davis/AndersonPromoters">Anderson Promoters</a></li>
+
-
                        <li><a href="/Team:UC_Davis/AndersonPromoters2">Anderson II</a></li>
+
-
                        </ul>
+
-
</li>
+
-
<li class="dropdown leftbookend rightbookend">
+
-
<a href='/Team:UC_Davis/Notebook_Overview' style="font-size:13px;">Notebook</a>
+
-
<ul>
+
-
                                <li><a href="/Team:UC_Davis/Notebook">Notebook</a></li>
+
-
<li><a href="/Team:UC_Davis/Protocols">Protocols</a></li>
+
-
                                <li><a href="https://2014.igem.org/Team:UC_Davis/Gallery">Gallery</a></li>
+
-
                                <li><a href="https://2014.igem.org/Team:UC_Davis/Attributions">Attributions</a></li>
+
-
</ul>
+
-
</li>
+
-
<li class="dropdown rightbookend">
+
-
<a href="/Team:UC_Davis/HumanPracticesOverview" style="font-size:13px;">Human Practices</a>
+
-
<ul>
+
-
<li><a href='/Team:UC_Davis/HumanPracticesOverview'>Overview</a></li>
+
-
<li><a href='/Team:UC_Davis/Outreach'>Outreach</a></li>
+
-
                                <li><a href='/Team:UC_Davis/Database'>The Depot</a></li>
+
-
</ul>
+
-
</li>
+
-
</ul>
+
-
    </body>
+
</html>
</html>

Latest revision as of 05:45, 24 November 2014

UC Davis iGEM 2014

OliView: An Enzyme Based Electrochemical Biosensor Developed for Olive Oil Quality Control

In a report conducted by the UC Davis Olive Oil Center, it was found that more than 65% of the extra virgin olive oil on shelves around the US is defective due to poor handling or deliberate adulteration with extraneous, non-beneficial oils. The most prevalent and identifying defect in olive oil is rancidity, indicating the absence of expected health benefits such as antioxidants and polyunsaturated fats. This summer, we engineered a biosensor capable of quickly and cheaply evaluating rancidity defects in the chemical profile of olive oil, providing both consumers and retailers with a means of ensuring product quality.

The project consisted of four components: Protein Engineering, Electrochemistry, Development of a user friendly potentiostat and signal processing. We were able to provide proof of concept for each component of our device. With each component combined, we had a fully functional electrochemical biosensor that could distinguish rancid olive oil from fresh.

Read full version of our practice and policy report