Team:Tokyo-NoKoGen/trehalose production

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About otsA and otsB

The trehalose biosynthetic operon – otsA and otsB

　Trehalose (α-D-glucopyranosyl-[1,1]-α-D-glucopyranoside) is a non-reducing disaccharide in which two glucose units are linked by an α,α-1,1 bond and is common in nature. In yeast and fungi, trehalose plays an important role in protection against environmental stresses such as desiccation, heat, frost, and high osmolarity. The pathway for trehalose synthesis induced by osmotic stress in E. coli is the same as in other species.

　The genes otsA and otsB are required for trehalose production in E. coli. The otsA gene encodes trehalose-6-phosphate synthase. This enzyme converts UDP-glucose and D-glucose-6-phosphate to trehalose-6-phosphate. The otsB gene encodes trehalose-6-phosphate phosphatase. This enzyme converts trehalose-6-phosphate to trehalose.

　The operon otsBA is induced by osmotic stress, extreme heat, extreme cold, desiccation, and entry into stationary phase. Therefore, we decided to culture E. coli under high salt level in order to overexpress the genes.

Reference
(1) Crowe, J. H. et al., (1990) Are freezing and dehydration similar stress vectors? A comparison of modes of interaction of stabilizing solutes with biomolecules., Cryobiology. 27, 219-231.
(2) Crowe, J. H. et al., (1992) Anhydrobiosis., Annu Rev Physio. 54, 579–599.
(3) Kaasen, I. et al., (1992) Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR)., J Bacteriol. 174, 889–898.
(4) Giaever, H. M. et al., (1988) Biochemical and genetic characterization of osmoregulatory trehalose synthesis in Escherichia coli., J Bacteriol. 170, 2841–2849.
(5) Eastmond, P. J. et al., (2003) Trehalose metabolism: a regulatory role for trehalose-6-phosphate?, Current Opinion in Plant Biology. 6, 231–235.
(6) Strom, A. R. et al., (1993) Trehalose metabolism in Escherichia coli: stress protection and stress regulation of gene expression. Molecular Microbiology. 8, 205-210.

Cloning otsA and otsB

1.Construction of Biobrick.

　otsA gene and otsB gene were cloned from E.coli K-12 strain. PCR products were digested with EcoRI and PstI and digested products were inserted into pSB1A2.
　otsB gene and otsA gene were ligated with four promoters and double terminator (BBa_B0010 and BBa_B0012).
　One of those promoters is arabinose inducible, and the others are constitutive promoter.

Table 1. Promoter

Evaluation of trehalose production

Optimization of culture condition

It has been reported that trehalase derived from host E. coli was expressed higher when E. coli reach to stationary phase (1). At first, we monitored the growth of transformants and optimized the growth condition for further experiments.

Reference

We added 600 mM NaCl and 2% Glucose to LB medium because it is known that storage of trehalose is increased under osmotic stress and glucose is a precursor of trehalose (2). Escherichia coli strain TOP10/ pSB1A2-P_low-RBS-otsBA (BBa_K1339018) was cultured in LB medium containing 600 mM NaCl and 2% glucose at 150 rpm, 30 ℃

.

Fig. 1 shows the growth curve of transformants. From the result, we found that this transformants reached stationary state after 15 hours cultivation. So, we decided to culture the cell harboring otsBA for12 hours (while growth state) for further evaluation.

Fig. 1 OD₆₆₀ monitoring of empty vector and P_low-RBS-otsBA-DT

2. Optimization of trehalose detection by thin-layer chromatography (TLC) method

We used TLC plate coated with silica gel. As standard sample, 1 mL of 1, 5, 10, 50 and 100 mM glucose and trehalose were spotted onto TLC plates and dried at room temperature. The TLC plates were developed in acetonitrile –water (7:3), dried and dipped into H ₂ SO₄-ethanol (5:95). Fig. 2 showed the result of TLC of glucose and trehalose. The Rf value of glucose is approximately 0.47. And the Rf value of trehalose is approximately 0.35. The detection limit of glucose and trehalose were 5 mM and 10 mM respectively.

Thus, in our experiments, we tried to confirm the production of trehalose by E.coli by this method.

Fig. 2 the result of TLC of standard samples; glucose and trehalose

3. Optimization of enzyme reaction time

To measure the concentration of trehalose, trehalose was converted to glucose with trehalase, which was then measured using a glucose dehydrogenase. At first, we investigated the optimal enzyme reaction time. Trehalase was added to 50 mM trehalose solution and incubated for 30 min at 37 ℃.

This was the result of TLC of three samples (Fig. 3). The Rf value of the trehalose+trehalase, trehalose, and glucose were 0.42, 0.37 and 0.45 respectively. From this result, the time of trehalase reaction was not enough. Thus we dicided to incubate for overnight.

Fig. 3 TLC after trehalase reaction

4. Evaluation of trehalose production in Escherichia coli

Escherichia coli strain TOP10 was transformed with the vectors that constitutively express otsA and otsB under different strength promoter (Table.) Transformants were cultured in Lysogeny Broth medium (LB medium) containing 600 mM NaCl and 2% Glucose) at 150 rpm and 37 ℃ for 12 hours. The transformants were harvested and washed with phosphate buffered saline containing 600 mM NaCl and then, resuspended with ultra pure water. Trehalose was extracted by boiling cell pellets at 95 ℃ for 5 min and cells were removed by centrifugation at 8,000 g for 15 min. The supernatant was concentrated by freeze-drying and used for TLC. 1 mL of each samples were spotted onto TLC plates and dried at room temperature. The TLC plates were developed in acetonitrile –water (7:3), dried and dipped into H ₂ SO₄-ethanol (5:95). The sugar spots were visualized by heating at 180 ℃.

4.Improving a BioBrick part - OtsB

BBa_K200006
In iGEM 2009, Imperial College London team submitted OtsB part (BBa_K200006). However, evaluation data is not available in part page, so we tried to evaluate the BBa_K200006 and compared with our part (BBa_K1339001). Promoter (medium constitutive promoter or low constitutive promoter) and double terminator was added to otsB, and inserted into pSB1A2 vector. Escherichia coli strain TOP10 transformed with constructed vectors were cultured in LB medium containing 600 mM NaCl and 2% Glucose at 150 rpm and 37℃ for 20 hours. The transformants were harvested and washed with phosphate buffered saline containing 600 mM NaCl and then, resuspended with SPB buffer. Cells were fractured by sonication and then centrifugated at 8,000 g for 15 min. Trehalose 6-phosphate, which is a precursor of trehalose was added to supernatant and incubated at 37　℃ overnight. The supernatant was concentrated by freeze-drying and used for thin-layer chromatography (TLC). The pellet was used for SDS-PAGE.