Team:SJTU-BioX-Shanghai/Protocol

From 2014.igem.org

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     <p><a href="https://2014.igem.org/Team:SJTU-BioX-Shanghai/Protocol#a">Molecule</a></p>
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                                 <p><a href="#b">Cell</a></p>
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                                 <p><a href="https://2014.igem.org/Team:SJTU-BioX-Shanghai/Protocol#b">Cell</a></p>
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                                 <p><a href="#d">Protein</a></p>
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                                 <p><a href="https://2014.igem.org/Team:SJTU-BioX-Shanghai/Protocol#d">Protein</a></p>
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                     <h2  id="July">July Week1</h2><br>
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                     <h2  id="Molecule">Molecule</h2>
                     <p>Plasmid Amplification for further construction;  
                     <p>Plasmid Amplification for further construction;  
                         <br>chose pRSFDuet-1, pACYCDuet-1 and pCDFDuet-1 for expression vector and pBluescript II KS(+) for connector.<p>
                         <br>chose pRSFDuet-1, pACYCDuet-1 and pCDFDuet-1 for expression vector and pBluescript II KS(+) for connector.<p>
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                     <h2 id ="JulyWeek2" >July Week2</h2><br>
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                     <h2 id ="Cell" >Cell</h2>
                     <p>Construct the gene of our fusion protein: ssDsbA-FP-HL-Lgt-FL-TAL using splicing by overlap extension.   
                     <p>Construct the gene of our fusion protein: ssDsbA-FP-HL-Lgt-FL-TAL using splicing by overlap extension.   
                         We connected ssDsbA-FP-HL-lgt for one part of this fusion protein and FL-TAL for another. Then connect them together.<p>
                         We connected ssDsbA-FP-HL-lgt for one part of this fusion protein and FL-TAL for another. Then connect them together.<p>
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                     <h2 id ="JulyWeek3" >July Week3</h2><br>
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                     <h2 id ="Protein" >Protein</h2>
                     <p> Connected ssDsbA-FP-HL-lgt by splicing by overlap extension.  
                     <p> Connected ssDsbA-FP-HL-lgt by splicing by overlap extension.  
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                           Transform, colony picking plasmid extraction and digestion identification; Sequencing results showed accurate construction.<p>
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                           Transform, colony picking plasmid extraction and digestion identification; Sequencing results showed accurate construction.<p>              
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                    <h2 id ="JulyWeek4" >July Week4</h2><br>
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                    <p> Use golden gate to connected TAL of 2012 Freiburg igem.
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                          Transform, colony picking plasmid extraction and digestion identification.<p>
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                    <h2  id="August">August Week1-2</h2><br>
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                    <p>Test the conditions for the PCR.
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                          Connected TAL, transform, colony picking plasmid extraction and digestion identification.  Find with our electrophoresis band. Expression vectors and connector plasmid are confirmed by sequencing.<p>
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                    <h2 id ="AugustWeek3" >August Week3</h2><br>
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                    <p>There are some problems about Freiburg’s parts. We can’t connected TAL in the right order.
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                          So we design some new primes for PCR that can produce the right sequence.<p>
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                    <h2 id ="AugustWeek4" >August Week4</h2><br>
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                    <p>Design a few new ports for the fusion protein.
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                          Sequencing results showed accurate construction. Observe the FP using LSCM to confirm the fusion protein can locate on the membrane.<p>   
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                    <h2  id="September" >September Week1</h2><br>
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                    <p>Try co-transformation: Prsf  pacyc  pBluescript .
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                          Find the conditions of protein expression.
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                          Find the way to construct the TAL.<p>         
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                    <h2 id ="SeptemberWeek2" >September Week2</h2><br>
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                    <p>Find the enzymes for the application.
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                          Find the way to detect the substrate in these pathways.
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                          Connector plasmid modification.<p>   
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                    <h2 id ="SeptemberWeek3" >September Week3</h2><br>
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                    <p>TAL gene synthesis. Construct the part with our new ports.<p>
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                    <h2 id ="SeptemberWeek4" >September Week4</h2><br>
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                    <p> TAL gene synthesis.<p>                 
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Revision as of 15:24, 16 October 2014

Week Notes
Protocol

Molecule

Plasmid Amplification for further construction;
chose pRSFDuet-1, pACYCDuet-1 and pCDFDuet-1 for expression vector and pBluescript II KS(+) for connector.

Cell

Construct the gene of our fusion protein: ssDsbA-FP-HL-Lgt-FL-TAL using splicing by overlap extension. We connected ssDsbA-FP-HL-lgt for one part of this fusion protein and FL-TAL for another. Then connect them together.

Protein

Connected ssDsbA-FP-HL-lgt by splicing by overlap extension. Transform, colony picking plasmid extraction and digestion identification; Sequencing results showed accurate construction.