Team:UC Davis/Protein Engineering MM
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Revision as of 18:11, 14 October 2014
Assay Components
Kinetic Constants of WT Escherichia coli Aldehyde Dehydrogenase | ||||||
---|---|---|---|---|---|---|
Substrate | kcat | kcat Error | KM | KM Error | kcat/KM | kcat/KM Error |
Propionaldehyde | 8.00 | 0.27 | 782.87 | 50.83 | 10221.04 | 748.00 |
Butyraldehyde | 6.27 | 0.28 | 196.68 | 27.65 | 31867.74 | 4700.95 |
Pentanal | 6.18 | 0.22 | 45.92 | 6.77 | 134598.00 | 20398.49 |
Hexanal | 5.37 | 0.53 | 12.65 | 6.36 | 424348.82 | 217516.13 |
Heptanal | Bad Fit | --- | --- | --- | --- | --- |
Octanal | 4.53 | 0.61 | 40.33 | 23.41 | 112265.52 | 66927.82 |
Nonanal | 3.99 | 0.44 | 27.62 | 14.10 | 144584.42 | 75534.70 |
Decanal | Bad Fit | --- | --- | --- | --- | --- |
E-2-Pentenal | 0.94 | 0.05 | 99.33 | 20.74 | 9480.51 | 2054.66 |
E-2-Hexenal | 1.29 | 0.04 | 31.16 | 4.84 | 41478.41 | 6599.45 |
E-2-Octenal | 0.99 | 0.03 | 12.27 | 1.86 | 81100.47 | 12529.78 |
E-2-Nonenal | 0.87 | 0.02 | 9.60 | 1.16 | 90621.93 | 11127.45 |
E-2-Decenal | 0.66 | 0.01 | 13.34 | 1.37 | 49715.95 | 5217.05 |
E,E-2,4-Heptadienal | 0.68 | 0.11 | 142.08 | 75.99 | 4809.31 | 2682.89 |
E,E-2,4-Nonadienal | Bad Fit | --- | --- | --- | --- | --- |
E,E-2,4-Decadienal | ND | ND | ND | ND | ND | ND |
Kinetic Constants of W176V Escherichia coli Aldehyde Dehydrogenase | ||||||
---|---|---|---|---|---|---|
Substrate | kcat | kcat Error | KM | KM Error | kcat/KM | kcat/KM Error |
Propionaldehyde | 7.57 | 1.24 | 2575.71 | 559.82 | 2937.45 | 800.31 |
Butyraldehyde | 4.42 | 0.12 | 532.70 | 32.00 | 8306.37 | 546.34 |
Pentanal | 5.44 | 0.35 | 165.35 | 35.25 | 32877.93 | 7328.72 |
Hexanal | 7.29 | 0.37 | 38.93 | 8.48 | 187159.14 | 41828.31 |
Heptanal | 5.87 | 0.38 | 26.17 | 7.87 | 224363.85 | 68987.72 |
Octanal | 6.55 | 0.45 | 84.25 | 21.41 | 77758.66 | 20464.40 |
Nonanal | 6.41 | 0.31 | 75.29 | 13.54 | 85145.04 | 15837.70 |
Decanal | 4.79 | 0.18 | 47.93 | 7.32 | 99954.31 | 15711.24 |
E-2-Pentenal | ND | ND | ND | ND | ND | ND |
E-2-Hexenal | 0.22 | 0.02 | 28.11 | 9.85 | 7797.24 | 2796.55 |
E-2-Octenal | Bad Fit | --- | --- | --- | --- | --- |
E-2-Nonenal | Bad Fit | --- | --- | --- | --- | --- |
E-2-Decenal | Bad Fit | --- | --- | --- | --- | --- |
E,E-2,4-Heptadienal | ND | ND | ND | ND | ND | ND |
E,E-2,4-Nonadienal | ND | ND | ND | ND | ND | ND |
E,E-2,4-Decadienal | ND | ND | ND | ND | ND | ND |
Kinetic Constants of WT Rattus norvegicus (Rat) Aldehyde Dehydrogenase | ||||||
---|---|---|---|---|---|---|
Substrate | kcat | kcat Error | KM | KM Error | kcat/KM | kcat/KM Error |
Propionaldehyde | 19.90 | 0.51 | 1002.36 | 45.02 | 19856.17 | 1026.79 |
Butyraldehyde | 12.46 | 0.22 | 261.02 | 13.60 | 47740.02 | 2629.46 |
Pentanal | 10.51 | 0.44 | 118.05 | 17.28 | 89060.79 | 13565.38 |
Hexanal | 8.28 | 0.66 | 32.90 | 11.62 | 251744.09 | 91148.58 |
Heptanal | Bad Fit | --- | --- | --- | --- | --- |
Octanal | 6.62 | 0.57 | 107.94 | 32.67 | 61315.18 | 19282.67 |
Nonanal | 7.62 | 0.68 | 88.69 | 29.02 | 85930.06 | 29145.22 |
Decanal | 9.06 | 0.66 | 93.84 | 24.92 | 96541.80 | 26598.58 |
E-2-Pentenal | 8.68 | 0.54 | 694.05 | 86.75 | 12509.32 | 1745.41 |
E-2-Hexenal | 8.54 | 0.15 | 220.14 | 11.54 | 38785.27 | 2139.18 |
E-2-Octenal | 7.51 | 0.47 | 65.81 | 16.08 | 114129.56 | 28807.70 |
E-2-Nonenal | 9.50 | 0.58 | 75.41 | 17.52 | 125987.94 | 30284.84 |
E-2-Decenal | 6.05 | 0.25 | 58.69 | 9.63 | 103066.45 | 17434.71 |
E,E-2,4-Heptadienal | 6.01 | 0.31 | 31.77 | 7.40 | 189320.39 | 45208.07 |
E,E-2,4-Nonadienal | 6.44 | 0.47 | 49.38 | 14.83 | 130374.03 | 40304.11 |
E,E-2,4-Decadienal | 6.32 | 0.33 | 30.75 | 7.27 | 205360.25 | 49735.07 |