Team:NRP-UEA-Norwich/Notebook
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</div> | </div> | ||
<div class="container"> We have documented the day to day progress of our iGEM project in our online Lab Notebook, which includes our wet lab experiments, policy and practices planning and outreach events. | <div class="container"> We have documented the day to day progress of our iGEM project in our online Lab Notebook, which includes our wet lab experiments, policy and practices planning and outreach events. | ||
- | + | <div id="accordion"> | |
- | <h3>Week One | + | <h3 class="accordion-toggle">Week One</h3> |
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Contacted by email UEA based organisations UEA:TV, Concrete and Livewire regarding possible exposure for our project. | - Contacted by email UEA based organisations UEA:TV, Concrete and Livewire regarding possible exposure for our project. | ||
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<h2>Friday</h2> | <h2>Friday</h2> | ||
- Submitted 'About our lab' form for iGEM before deadline. | - Submitted 'About our lab' form for iGEM before deadline. | ||
- | <h3>Week Two | + | </div> |
+ | <h3 class="accordion-toggle">Week Two</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Completed The Sainsbury Laboratory (TSL) safety induction. | - Completed The Sainsbury Laboratory (TSL) safety induction. | ||
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<h2>Friday</h2> | <h2>Friday</h2> | ||
- Found poor blue/white selection on dig-ligs from 26.06.14. Suspected to be due to either the enzyme used or PCR block. - Set up a new set of dig-ligs to test the source of this problem. | - Found poor blue/white selection on dig-ligs from 26.06.14. Suspected to be due to either the enzyme used or PCR block. - Set up a new set of dig-ligs to test the source of this problem. | ||
- | <h3>Week Three | + | </div> |
+ | <h3 class="accordion-toggle">Week Three</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Set up 10 Dig-Lig reactions with new BSA1 enzyme provided by TSL. | - Set up 10 Dig-Lig reactions with new BSA1 enzyme provided by TSL. | ||
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- Dephosphorylation of plasmid backbone | - Dephosphorylation of plasmid backbone | ||
- Colony PCR of colonies picked from agro plates (transformed 10.7.14) | - Colony PCR of colonies picked from agro plates (transformed 10.7.14) | ||
- | <h3>Week Four | + | </div> |
+ | <h3 class="accordion-toggle">Week Four</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Colonies picked from agrobacterium plates from 2.7.14 | - Colonies picked from agrobacterium plates from 2.7.14 | ||
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- Colonies picked from ligation on 10.7.14 (GG compatible PSB1C3 for accepting Pro, CDS, Ter level 0 parts) and grown in 5 ml of LB broth, incubated in shaker O/N at 37 °C | - Colonies picked from ligation on 10.7.14 (GG compatible PSB1C3 for accepting Pro, CDS, Ter level 0 parts) and grown in 5 ml of LB broth, incubated in shaker O/N at 37 °C | ||
- Attended the UEA BIO Research Colloquium from 9am - 3.30pm | - Attended the UEA BIO Research Colloquium from 9am - 3.30pm | ||
- | <h3>Week Five | + | </div> |
+ | <h3 class="accordion-toggle">Week Five</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Mini prep of Mo Flipper Modules DNA | - Mini prep of Mo Flipper Modules DNA | ||
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<h2>Friday</h2> | <h2>Friday</h2> | ||
- Preparation of media required: LB, LB agar, LB + Chloramphenicol plates and LB + Kanamycin plates. | - Preparation of media required: LB, LB agar, LB + Chloramphenicol plates and LB + Kanamycin plates. | ||
- | <h3>Week Six | + | </div> |
+ | <h3 class="accordion-toggle">Week Six</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- 2 single colonies picked from agro plates grown 02/07/2014. | - 2 single colonies picked from agro plates grown 02/07/2014. | ||
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- Collected leaflets for distribution | - Collected leaflets for distribution | ||
- Digest of PSB1C3 to drop out RFP and ran on 1% TAE agarose gel to characterise. | - Digest of PSB1C3 to drop out RFP and ran on 1% TAE agarose gel to characterise. | ||
- | <h3>Week Seven | + | </div> |
+ | <h3 class="accordion-toggle">Week Seven</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Meeting with Tom Shakespeare based at UEA Med to discuss the ethics of 'The Green Canary' Project. | - Meeting with Tom Shakespeare based at UEA Med to discuss the ethics of 'The Green Canary' Project. | ||
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<h2>Friday</h2> | <h2>Friday</h2> | ||
- Arranged meeting with Mark Wilkinson to discuss University regulation ethics approval for the Green Canary Project | - Arranged meeting with Mark Wilkinson to discuss University regulation ethics approval for the Green Canary Project | ||
- | <h3>Week Eight | + | </div> |
+ | <h3 class="accordion-toggle">Week Eight</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Colony PCR of Agrobacterium plates containing constructs 2,3,4,10,11 which had been grown over the weekend at 28 °C. | - Colony PCR of Agrobacterium plates containing constructs 2,3,4,10,11 which had been grown over the weekend at 28 °C. | ||
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- We invited the Cambridge iGEM team up to meet us and discuss each others projects as well as future collaborations and gave them a tour of the NRP, JIC and UEA. We discussed providing Cambridge with our MoFlipper so they can submit their parts in BioBrick form as well. | - We invited the Cambridge iGEM team up to meet us and discuss each others projects as well as future collaborations and gave them a tour of the NRP, JIC and UEA. We discussed providing Cambridge with our MoFlipper so they can submit their parts in BioBrick form as well. | ||
- Jack met with Graeme Byrne to prepare for meeting with InCrops on the 28th of August. | - Jack met with Graeme Byrne to prepare for meeting with InCrops on the 28th of August. | ||
- | <h3>Week Nine | + | </div> |
+ | <h3 class="accordion-toggle">Week Nine</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Picked 2 colonies of the level 2 dig-lig's transformed on friday. A, B, C, D, E, F, G and the level 2 Vector pAGM8031. Colonies grown in 1 ml of LB containing 1 μL/mL of Spectinomycin O/N. | - Picked 2 colonies of the level 2 dig-lig's transformed on friday. A, B, C, D, E, F, G and the level 2 Vector pAGM8031. Colonies grown in 1 ml of LB containing 1 μL/mL of Spectinomycin O/N. | ||
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- Set up overnight cultures of all Agro. transformations (2.1, 3.1, 4.1, 10.2 and 11.1). | - Set up overnight cultures of all Agro. transformations (2.1, 3.1, 4.1, 10.2 and 11.1). | ||
- Set up overnight cultures of Mo Flippers, to be incubated over the weekend so they can be minipreped and sent for sequencing. | - Set up overnight cultures of Mo Flippers, to be incubated over the weekend so they can be minipreped and sent for sequencing. | ||
- | <h3>Week Ten | + | </div> |
+ | <h3 class="accordion-toggle">Week Ten</h3> | ||
+ | <div class="accordion-content default"> | ||
<h2>Monday</h2> | <h2>Monday</h2> | ||
- Transformed Agro for Canary 1 experiments and spreadplated onto LB plates containing Rif, Gen and Amp antibiotics and stored at 28 °C for 2 days. | - Transformed Agro for Canary 1 experiments and spreadplated onto LB plates containing Rif, Gen and Amp antibiotics and stored at 28 °C for 2 days. | ||
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- Midiprep of overnight Mo flipper cultures from wk10 d4. | - Midiprep of overnight Mo flipper cultures from wk10 d4. | ||
- Quantification of DNA from Mo flipper midiprep. | - Quantification of DNA from Mo flipper midiprep. | ||
- | + | </div> | |
- | + | </div> | |
</div> | </div> | ||
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})(); | })(); | ||
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Revision as of 13:49, 12 October 2014
Lab Notebook
We have documented the day to day progress of our iGEM project in our online Lab Notebook, which includes our wet lab experiments, policy and practices planning and outreach events.