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- | {{CSS/Main}} | + | {{Team:Tsinghua/CSS/Common-Style}} |
- | | + | {{Team:Tsinghua/CSS/Nav-Style}} |
- | | + | {{Team:Tsinghua/CSS/iGEM-Top-Style}} |
| <html> | | <html> |
- | <style type="text/css"> | + | <body> |
- | #groupparts {text-align: center; margin-left: auto; margin-right: auto;} | + | <div class="container"> |
- | </style> | + | <header><img src="https://static.igem.org/mediawiki/2014/7/7a/Tsinghua_Header_1.png" width="975" height="119" alt="" usemap="#bannermap"/></header> |
- | <!--main content --> | + | <div class="sidebar1"> |
- | <table width="70%" align="center"> | + | <map name="bannermap"> |
| + | <area shape="rect" coords="40,20,270,100" href="https://2014.igem.org/Team:Tsinghua/Main_page" alt="Team Tsinghua 2014"> |
| + | <area shape="rect" coords="860,25,950,100" href="https://2014.igem.org/Main_Page" alt="Return to iGEM 2014"> |
| + | </map> |
| + | |
| + | <div id="sidebarfiller"></div> |
| + | <nav> |
| + | <ul> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Main_page">MAIN PAGE</a></li> |
| + | |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Introduction">INTRODUCTION</a> |
| + | <ul> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Introduction">Overview</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Introduction/Diabetes">Diabetes Type I</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Introduction/Gene_therapy">Gene Therapy</a></li> |
| + | </ul> |
| + | </li> |
| + | |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Project">PROJECT</a> |
| + | <ul> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Project">Overview</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Project/Virus">The Virus</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Project/Drug">The Drug</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Project/Microbe">The Microbe</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Project/Cocktail">The Cocktail</a></li> |
| + | </ul> |
| + | </li> |
| + | |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Modeling">Modeling</a></li> |
| + | |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Parts">Parts</a></li> |
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| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Safety">SAFETY</a></li> |
| + | |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Notebook">NOTEBOOK</a> |
| + | <ul> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Notebook">OVERVIEW</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Notebook/Protocol">PROTOCOL</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Notebook/Lablog">LABLOG</a></li> |
| + | </ul> |
| + | </li> |
| + | |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Human_practice">HUMAN PRACTICE</a> |
| + | <ul> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Human_practice">OVERVIEW</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Human_practice/Gallery">GALLERY</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Human_practice/Outreach">OUTREACH</a></li> |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Human_practice/Video">VIDEO</a></li> |
| + | </ul> |
| + | </li> |
| + | |
| + | <li><a href="https://2014.igem.org/Team:Tsinghua/Team">TEAM</a></li> |
| + | |
| + | </ul> |
| + | </nav> |
| + | <aside style="height: 2950px;"></aside> |
| + | <!-- end .sidebar1 --></div> |
| + | |
| + | <article class="content"> |
| + | <h1>Parts</h1> |
| + | <h3> </h3> |
| + | <h2>2014-PDX-1</h2> |
| + | <div align="center"><img src="https://static.igem.org/mediawiki/2014/5/5f/2014_thu_parts1.png"></div> |
| + | <p>PDX-1 is a transcriptional factor that activates insulin, somatostatin, glucokinase, islet amyloid polypeptide and glucose transporter type 2 gene transcription. It’s essential for development of pancreas and maintain of the hormone-producing phenotype of the beta-cell. PDX-1 is used here for glucose-dependent regulation of insulin gene expression.</p> |
| + | <h3>PDX-1</h3> |
| + | <p>PDX-1 is a transcription factor involved in the expression of insulin and insulin-related genes. Co-transfection of PDX-1 and MafA in mammalian cells induces cell-type conversion to insulin producing beta-cells.</p> |
| + | <h3> </h3> |
| | | |
| + | <h2>2014-insulin</h2> |
| + | <div align="center"><img src="https://static.igem.org/mediawiki/2014/0/07/2014_thu_parts2.png"></div> |
| + | <p>The insulin gene consists three exons, which encode B chain, C peptide and A chain. We modified the protease recognition sites of insulin gene to make sure that the insulin gene product undergoes accurate modification. The signal peptide and C peptide are removed after transcription and translation and two disulfide bonds form between A chain and B chain, undergoing folding to become functional insulin.</p> |
| + | <h3>Insulin (modified protease recognition sites)</h3> |
| + | <p>Encodes the human insulin gene (full length). Two 6 bp sequences were inserted into two separate sites within the insulin gene to allow enzymatic digestion by the protease furin. Originally, proinsulin is cleaved three times with three different enzymes, prohormone convertases (PC1 and PC2), and carboxypeptidase E before being secreted as mature insulin. Since PC1 and PC2 expression is tissue specific, we replaced their recognition sites with that of furin, which is universally expressed, thus allowing this insulin gene to be expressed and processed in any somatic cell type.</p> |
| + | <h3> </h3> |
| | | |
- | <!--welcome box -->
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- | <tr>
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- | <td style="border:1px solid black;" colspan="3" align="center" height="150px" bgColor=#FF404B>
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- | <h1 >WELCOME TO iGEM 2014! </h1>
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- | <p>Your team has been approved and you are ready to start the iGEM season!
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- | <br>On this page you can document your project, introduce your team members, document your progress <br> and share your iGEM experience with the rest of the world! </p>
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- | <br>
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- | <p style="color:#E7E7E7"> <a href="https://2014.igem.org/wiki/index.php?title=Team:Tsinghua/Parts&action=edit"style="color:#FFFFFF"> Click here to edit this page!</a> </p>
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- | </td>
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- | </tr>
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- | <tr> <td colspan="3" height="5px"> </td></tr>
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- | <!-- end welcome box -->
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- | <tr>
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| | | |
- | <!--navigation menu --> | + | <h2>2014-HXT1+CMV</h2> |
- | <td align="center" colspan="3"> | + | <div align="center"><img src="https://static.igem.org/mediawiki/2014/7/77/2014_thu_parts3.png"></div> |
| + | <p>Part HXT1+CMV is used as promoter for target gene under the regulation of glucose, consisting of HXT-1 promoter and CMV promoter. HXT-1 is a low-affinity glucose transporter from Saccharomyces cerevisiae. There is a glucose response element in HXT-1 gene sensitive to glucose in human fibroblasts, which is used here as a glucose-dependent regulator.</p> |
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- | <table width="100%"> | + | <h3> </h3> |
- | <tr heigth="15px"></tr>
| + | |
- | <tr heigth="75px">
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- | | + | <h2>2014-HXT1+CMV+EGFP+ADH1</h2> |
- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7> | + | <div align="center"><img src="https://static.igem.org/mediawiki/2014/e/e3/2014_thu_parts4.png"></div> |
- | <a href="https://2014.igem.org/Team:Tsinghua"style="color:#000000">Home </a> </td>
| + | <p>HXT-1+CMV+EGFP+ADH1 consists of HXT-1+CMV promoter, EGFP and terminator ADH1. HXT-1+CMV promoter controls EGFP expression under the regulation of glucose. EGFP is used here for testing of HXT1+CMV promoter and will be replaced by insulin gene.</p> |
- | | + | <h3>HXT1-CMVmini-EGFP-tADH1</h3> |
- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7> | + | <p>This is a composite part containing a glucose-sensitive promoter (BBa_K1328000) and a EGFP reporter with a tADH1 transcription terminator.</br> |
- | <a href="https://2014.igem.org/Team:Tsinghua/Team"style="color:#000000"> Team </a> </td>
| + | S. cerevisiae cells transformed with this part was cultured in glucose-free medium with glycerol as carbon-source for 8 hrs. They were then cultured for an additional hour with varying glucose levels (0, 5, 15, 25 mmol/L). A increasing level of GFP expression was observed with increasing levels of glucose concentration, in both microscopy and flow cytometry observations. |
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- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
| + | |
- | <a href="https://igem.org/Team.cgi?year=2014&team_name=Tsinghua"style="color:#000000"> Official Team Profile </a></td>
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- | <td style="border:1px solid black" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
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- | <a href="https://2014.igem.org/Team:Tsinghua/Project"style="color:#000000"> Project</a></td>
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- | | + | |
- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
| + | |
- | <a href="https://2014.igem.org/Team:Tsinghua/Parts"style="color:#000000"> Parts</a></td>
| + | |
- | | + | |
- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
| + | |
- | <a href="https://2014.igem.org/Team:Tsinghua/Modeling"style="color:#000000"> Modeling</a></td>
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- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
| + | |
- | <a href="https://2014.igem.org/Team:Tsinghua/Notebook"style="color:#000000"> Notebook</a></td>
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- | | + | |
- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
| + | |
- | <a href="https://2014.igem.org/Team:Tsinghua/Safety"style=" color:#000000"> Safety </a></td>
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- | <td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
| + | |
- | <a href="https://2014.igem.org/Team:Tsinghua/Attributions"style="color:#000000"> Attributions </a></td>
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- | <td align ="center"> <a href="https://2014.igem.org/Main_Page"> <img src="https://static.igem.org/mediawiki/igem.org/6/60/Igemlogo_300px.png" width="55px"></a> </td>
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- | </tr> | + | |
- | </table>
| + | |
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- | <!--end navigation menu -->
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- | </tr> | + | |
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- | </tr> | + | |
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- | </td>
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- | <tr> <td colspan="3" height="15px"> </td></tr>
| + | |
- | <tr><td bgColor="#e7e7e7" colspan="3" height="1px"> </tr>
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- | <tr> <td colspan="3" height="5px"> </td></tr>
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- | | + | |
- | | + | |
- | <!--Parts Submitted to the Registry -->
| + | |
- | <tr><td > <h3> Parts Submitted to the Registry </h3></td>
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- | <td ></td >
| + | |
- | <td > <h3>What information do I need to start putting my parts on the Registry? </h3></td>
| + | |
- | </tr>
| + | |
- | <tr>
| + | |
- | <td width="45%" valign="top">
| + | |
- | <p> | + | |
- | An important aspect of the iGEM competition is the use and creation of standard biological parts. Each team will make new parts during iGEM and will submit them to the <a href="http://partsregistry.org"> Registry of Standard Biological Parts</a>. The iGEM software provides an easy way to present the parts your team has created. The "groupparts" tag will generate a table with all of the parts that your team adds to your team sandbox.
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- | <p>
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- | <strong>Note that if you want to document a part you need to document it on the <a href="http://partsregistry.org Registry"> Registry</a>, not on your team wiki.</strong> Future teams and other users and are much more likely to find parts on the Registry than on your team wiki.
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| </p> | | </p> |
| + | <h3> </h3> |
| | | |
- | <p> | + | <!-- end .content --></article> |
- | Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without a need to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.
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- | </p>
| + | <footer> |
- | | + | <div id="logoContainer"> |
- | | + | <a href="http://www.tsinghua.edu.cn/"><img src="https://static.igem.org/mediawiki/2014/3/30/Tsinghua_Logo_thu.png" /></a> |
- | | + | <a href="http://life.tsinghua.edu.cn/"><img src="https://static.igem.org/mediawiki/2014/2/22/Tsinghua_Logo_thulife_full.png" /></a> |
- | <h3>When should you put parts into the Registry?</h3>
| + | <a href="http://xuetangban.life.tsinghua.edu.cn/"><img src="https://static.igem.org/mediawiki/2014/b/bf/Tsinghua_Logo_xtb_full.png" /></a> |
- | | + | </div> |
- | <p>
| + | <address> |
- | As soon as possible! We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better recall you will have of all details surrounding your parts. Remember you don't need to send us the DNA to create an entry for a part on the Registry. However, you must send us the sample/DNA before the Jamboree. Only parts for which you have sent us samples/DNA are eligible for awards and medal requirements.
| + | </address> |
- | </p>
| + | </footer> |
- | </td> | + | <!-- end .container --></div> |
- | | + | </body> |
- | <td > </td> | + | |
- | <td width="45%" valign="top"> | + | |
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- | <p> | + | |
- | The information needed to initially create a part on the Registry is:
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- | </p>
| + | |
- | <ol>
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- | <li>Part Name</li>
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- | <li>Part type</li>
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- | <li>Creator</li>
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- | <li>Sequence</li>
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- | <li>Short Description (60 characters on what the DNA does)</li>
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- | <li>Long Description (Longer description of what the DNA does)</li>
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- | <li>Design considerations</li>
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- | </ol> | + | |
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- | <p>
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- | We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. Check out part <a href="http://parts.igem.org/Part:BBa_K404003">BBa_K404003</a> for an excellent example of a highly characterized part.
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- | </p>
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- | <p>
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- | You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry"> Add a Part to the Registry</a> link.
| + | |
- | </p>
| + | |
- | </td>
| + | |
- | </tr>
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- | <tr> <td colspan="3" height="15px"> </td></tr>
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- | <tr><td colspan="3" > <h3> Parts Table</h3></td></tr>
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- | <tr><td width="45%" colspan="3" valign="top"> | + | |
- | Any parts your team has created will appear in this table below:</td></tr>
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- | </table> | + | |
| </html> | | </html> |
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- | <groupparts>iGEM013 Tsinghua</groupparts>
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