Team:Macquarie Australia/WetLab/Protocols/CompetentCells

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<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols">Main</a></li>
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<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols">Protocol Home</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/CompetentCells">Competent Cells</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/CompetentCells">Competent Cells</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Electrophoresis">Electrophoresis</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Electrophoresis">Electrophoresis</a></li>
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<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Ligation">Ligation</a></<li>
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<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Ligation">Composite Part <br/>Ligation</a></<li>
  <li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Trypsin">Manual Trypsin <br/>In-Gel Digestion</a></<li>
  <li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Trypsin">Manual Trypsin <br/>In-Gel Digestion</a></<li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/MassSpec">Mass Spectrometry</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/MassSpec">Mass Spectrometry</a></li>
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<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/PlasmidPreps">Plasmid Prep</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/PlasmidPreps">Plasmid Prep</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/SDSPAGE">SDS-PAGE</a></li>
<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/SDSPAGE">SDS-PAGE</a></li>
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<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Heat">Heat Shock</a></li>
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<li><a href="https://2014.igem.org/Team:Macquarie_Australia/WetLab/Protocols/Operons">Induction of Operons</a></li>
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<div class="cont-out">
<div class="cont-out">
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<h3>Competent Cells</h3>
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<h3>Making Competent Cells</h3>
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<p></p>
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<ul style="list-style-type: decimal;">
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<li>Using a sterile plastic loop, pick 10-12 large (2-3mm in diameter) colonies from the plate. Inoculate to 150mL of SOB medium in a 1L flask, and grow overnight at 18-22<sup>o</sup>C, 200-250rpm.</li>
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<li>A600 should be 0.2-0.8 to harvest. Preferably, cells should be in mid log phase with A600 ~ 0.5.</li>
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<li>Remove the flask from the incubator and place on ice for 10 minutes.</li>
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<li>Transfer the culture to a 15mL centrifuge tube and spin at 2500 x g for 10 min at 4<sup>o</sup>C</li>
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<li>Pour off and discard the supernatant, and immediately place the tube on ice.</li>
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<li>Resuspend your cells in 1mL of ice-cold TB buffer, make sure there are no clumps of cells left, but also treat your cells gently and keep them cold.</li>
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<li>Add ice-cold TB buffer to bring volume up to 1/5th of the original culture volume (~30mL in this case). Mix the tube by gently inverting 3 times.</li>
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<li>Incubate the tube on ice for 10 minutes.</li>
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<li>Centrifuge at 2,500 x g for 7 minutes at 4<sup>o</sup>C, discard the supernatant.</li>
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<li>Gently resuspend the cells in ~1/20th of the original culture volume of ice-cold TB buffer. NOTE: 1/20th is based on and OD600 of 0.5, so adjust volume accordingly. e.g. if the culture OD600 was 0.1 then resuspend in 1/100th of original volume.</li>
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<li>Pre-chill 1.5ml Eppendorf tubes on ice. Add 930µl of your cell suspension, keeping the remainder on ice in the 15mL tube.</li>
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<li>Add 70µl of DMSO to the 930µl of cell suspension. Mix gently by swirling, and place on ice.</li>
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<li>Aliquot 100µl of the competent cell/DMSO mixture into fresh microcentrifuge tubes. Label the tubes with: Date – Strain. Snap freeze with liquid nitrogen.</li>
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<li>Repeat step 11-13 for the rest of your cell suspension in step 10. Store cells at -80<sup>o</sup>C. </li>
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</ul>
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<img src="https://static.igem.org/mediawiki/2014/7/7c/Competentcells.png" />
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<p><b>Figure 1.</b> Cell suspensions are stored at -80<sup>o</sup>C in liquid nitrogen.</p>
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<h3> Buffer Preparation </h3><br/>
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<h4>TB BUFFER</h4>
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<ul>
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<li><b>Ingredients:</b> 3g PIPES, 10.9g MnCl2-4H2O, 2.0 g CaCl2-2H2O, 18.6 g KCl.</li>
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<li><b>Methods:</b> All components (except for MnCl2-4H2O) were mixed and dissolved in 500 mL of water and pH adjusted to 6.7 with KOH. Then, MnCl2-4H2O, was dissolved in 300 mL of water, mixed and solution adjusted to 1 L. Sterilisation via filtration followed through a pre-rinsed 0.45 µm filter unit and stored at 4°C.</li>
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</ul>
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<h4>EDTA BUFFER</h4>
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<ul>
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<li><b>Ingredients:</b> 37.22g EDTA solid, 180 mL of water and pH adjusted to 8.0 using 10M NaOH.</li>
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<li><b>Methods:</b> Components were combined then pH adjusted.</li>
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</ul>
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<h4>TAE BUFFER</h4>
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<ul>
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<li><b>Ingredients:</b> 121.2g Tris base (dissolved in water) with 28.55mL of glacial acetic acid & 50mL 0.5M EDTA (pH 8.0).</li>
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<li><b>Methods:</b> A total volume of 500 mL was made up as a 50x stock solution using all components. </li>
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</ul>
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Latest revision as of 13:08, 17 October 2014

Protocols


Making Competent Cells


  • Using a sterile plastic loop, pick 10-12 large (2-3mm in diameter) colonies from the plate. Inoculate to 150mL of SOB medium in a 1L flask, and grow overnight at 18-22oC, 200-250rpm.
  • A600 should be 0.2-0.8 to harvest. Preferably, cells should be in mid log phase with A600 ~ 0.5.
  • Remove the flask from the incubator and place on ice for 10 minutes.
  • Transfer the culture to a 15mL centrifuge tube and spin at 2500 x g for 10 min at 4oC
  • Pour off and discard the supernatant, and immediately place the tube on ice.
  • Resuspend your cells in 1mL of ice-cold TB buffer, make sure there are no clumps of cells left, but also treat your cells gently and keep them cold.
  • Add ice-cold TB buffer to bring volume up to 1/5th of the original culture volume (~30mL in this case). Mix the tube by gently inverting 3 times.
  • Incubate the tube on ice for 10 minutes.
  • Centrifuge at 2,500 x g for 7 minutes at 4oC, discard the supernatant.
  • Gently resuspend the cells in ~1/20th of the original culture volume of ice-cold TB buffer. NOTE: 1/20th is based on and OD600 of 0.5, so adjust volume accordingly. e.g. if the culture OD600 was 0.1 then resuspend in 1/100th of original volume.
  • Pre-chill 1.5ml Eppendorf tubes on ice. Add 930µl of your cell suspension, keeping the remainder on ice in the 15mL tube.
  • Add 70µl of DMSO to the 930µl of cell suspension. Mix gently by swirling, and place on ice.
  • Aliquot 100µl of the competent cell/DMSO mixture into fresh microcentrifuge tubes. Label the tubes with: Date – Strain. Snap freeze with liquid nitrogen.
  • Repeat step 11-13 for the rest of your cell suspension in step 10. Store cells at -80oC.

Figure 1. Cell suspensions are stored at -80oC in liquid nitrogen.

Buffer Preparation


TB BUFFER

  • Ingredients: 3g PIPES, 10.9g MnCl2-4H2O, 2.0 g CaCl2-2H2O, 18.6 g KCl.
  • Methods: All components (except for MnCl2-4H2O) were mixed and dissolved in 500 mL of water and pH adjusted to 6.7 with KOH. Then, MnCl2-4H2O, was dissolved in 300 mL of water, mixed and solution adjusted to 1 L. Sterilisation via filtration followed through a pre-rinsed 0.45 µm filter unit and stored at 4°C.

EDTA BUFFER

  • Ingredients: 37.22g EDTA solid, 180 mL of water and pH adjusted to 8.0 using 10M NaOH.
  • Methods: Components were combined then pH adjusted.

TAE BUFFER

  • Ingredients: 121.2g Tris base (dissolved in water) with 28.55mL of glacial acetic acid & 50mL 0.5M EDTA (pH 8.0).
  • Methods: A total volume of 500 mL was made up as a 50x stock solution using all components.

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