Team:Bielefeld-CeBiTec/Notebook/Organisms
From 2014.igem.org
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<a href="https://static.igem.org/mediawiki/2014/2/25/Bielefeld-CeBiTec_2014-09-29_Ecoli.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/2/25/Bielefeld-CeBiTec_2014-09-29_Ecoli.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/2/25/Bielefeld-CeBiTec_2014-09-29_Ecoli.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/2/25/Bielefeld-CeBiTec_2014-09-29_Ecoli.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;">Scanning electron micrograph of <i>Escherichia coli</i>, grown in culture and adhered to a cover slip.</font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>The strain KRX is used for all approaches. Coding sequences of this organism were used for different purposes: | <p><br>The strain KRX is used for all approaches. Coding sequences of this organism were used for different purposes: | ||
<ul> | <ul> | ||
<li>frd - Fumarate reductase</li> | <li>frd - Fumarate reductase</li> | ||
<li>Cytochromes</li> | <li>Cytochromes</li> | ||
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</ul></p> | </ul></p> | ||
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<a style="font-size:24px" href="#"><h6><i>Lactococcus lactis</i> <a href="https://static.igem.org/mediawiki/2014/.pdf" target="_blank"> <img src="https://static.igem.org/mediawiki/2014/b/bd/Bielefeld-CeBiTec_2014-08-12_pdf_Icon.png" height="30px"> </a></h6></a> | <a style="font-size:24px" href="#"><h6><i>Lactococcus lactis</i> <a href="https://static.igem.org/mediawiki/2014/.pdf" target="_blank"> <img src="https://static.igem.org/mediawiki/2014/b/bd/Bielefeld-CeBiTec_2014-08-12_pdf_Icon.png" height="30px"> </a></h6></a> | ||
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</div> | </div> | ||
<div class="content" style="font-size:17px"> | <div class="content" style="font-size:17px"> | ||
<table style="background-color:transparent" float="right;"> | <table style="background-color:transparent" float="right;"> | ||
<tr> | <tr> | ||
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<a href="https://static.igem.org/mediawiki/2014/0/02/Bielefeld-CeBiTec_2014-09-29_Llactis.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/0/02/Bielefeld-CeBiTec_2014-09-29_Llactis.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/0/02/Bielefeld-CeBiTec_2014-09-29_Llactis.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/0/02/Bielefeld-CeBiTec_2014-09-29_Llactis.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;">Scanning Electron Micrograph of <i>Enterococcus faecalis</i></font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>Coding sequences of this organism were used for the isobutanol production: | <p><br>Coding sequences of this organism were used for the isobutanol production: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
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</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>BioBricks created with this organism:</td><td><a href="http://parts.igem.org/Part:BBa_K1465301" target="_blank">BBa_K1465301</a><br><a href="http://parts.igem.org/Part:BBa_K1465302" target="_blank">BBa_K1465302</a><br><a href="http://parts.igem.org/Part:BBa_K1465303" target="_blank">BBa_K1465303</a><br><a href="http://parts.igem.org/Part:BBa_K1465304" target="_blank">BBa_K1465304</a><br><a href="http://parts.igem.org/Part:BBa_K1465305" target="_blank">BBa_K1465305</a><br><a href="http://parts.igem.org/Part:BBa_K1465306" target="_blank">BBa_K1465306</a><br><a href="http://parts.igem.org/Part:BBa_K1465307" target="_blank">BBa_K1465307</a></td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
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<a href="https://static.igem.org/mediawiki/2014/a/a5/Bielefeld-CeBiTec_2014-09-29_Hneapolitanus.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/a/a5/Bielefeld-CeBiTec_2014-09-29_Hneapolitanus.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/a/a5/Bielefeld-CeBiTec_2014-09-29_Hneapolitanus.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/a/a5/Bielefeld-CeBiTec_2014-09-29_Hneapolitanus.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;">(A) Electron micrograph of <i>Halothiobacillus neapolitanus</i> cells, arrows highlight carboxysomes. (B) Image of intact carboxysomes isolated from <i>H. neapolitanus</i>. Scale bars indicate 100 nm.</font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>Coding sequences of this organism were used for the carboxysome: | <p><br>Coding sequences of this organism were used for the carboxysome: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
<table style="border-color:transparent" float="right;"> | <table style="border-color:transparent" float="right;"> | ||
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</div> | </div> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>BioBricks created with this organism:</td><td><a href="http://parts.igem.org/Part:BBa_K1465202" target="_blank">BBa_K1465202</a><br><a href="http://parts.igem.org/Part:BBa_K1465204" target="_blank">BBa_K1465204</a><br><a href="http://parts.igem.org/Part:BBa_K1465205" target="_blank">BBa_K1465205</a><br><a href="http://parts.igem.org/Part:BBa_K1465206" target="_blank">BBa_K1465206</a><br><a href="http://parts.igem.org/Part:BBa_K1465207" target="_blank">BBa_K1465207</a><br><a href="http://parts.igem.org/Part:BBa_K1465208" target="_blank">BBa_K1465208</a><br><a href="http://parts.igem.org/Part:BBa_K1465209" target="_blank">BBa_K1465209</a><br><a href="http://parts.igem.org/Part:BBa_K1465213" target="_blank">BBa_K1465213</a><br><a href="http://parts.igem.org/Part:BBa_K1465214" target="_blank">BBa_K1465214</a><br><a href="http://parts.igem.org/Part:BBa_K1465222" target="_blank">BBa_K1465222</a><br><a href="http://parts.igem.org/Part:BBa_K1465223" target="_blank">BBa_K1465223</a><br></td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
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<a href="https://static.igem.org/mediawiki/2014/8/88/Bielefeld-CeBiTec_2014-09-29_Bsubtilis.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/8/88/Bielefeld-CeBiTec_2014-09-29_Bsubtilis.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/8/88/Bielefeld-CeBiTec_2014-09-29_Bsubtilis.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/8/88/Bielefeld-CeBiTec_2014-09-29_Bsubtilis.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;">The Bacterium <i>Bacillus subtilis</i> taken with a Tecnai T-12 TEM. Taken by Allon Weiner, The Weizmann Institute of Science, Rehovot, Israel. 2006.</font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>A coding sequence of this organism was used for the isobutanol production: | <p><br>A coding sequence of this organism was used for the isobutanol production: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
<table style="border-color:transparent" float="right;"> | <table style="border-color:transparent" float="right;"> | ||
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+ | </tr> | ||
+ | <tr> | ||
+ | <td>BioBricks created with this organism:</td><td><a href="http://parts.igem.org/Part:BBa_K1465302" target="_blank">BBa_K1465302</a><br><a href="http://parts.igem.org/Part:BBa_K1465303" target="_blank">BBa_K1465303</a><br><a href="http://parts.igem.org/Part:BBa_K1465306" target="_blank">BBa_K1465306</a><br><a href="http://parts.igem.org/Part:BBa_K1465307" target="_blank">BBa_K1465307</a></td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
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<a href="https://static.igem.org/mediawiki/2014/2/20/Bielefeld-CeBiTec_2014-09-29_Selongatus.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/2/20/Bielefeld-CeBiTec_2014-09-29_Selongatus.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/2/20/Bielefeld-CeBiTec_2014-09-29_Selongatus.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/2/20/Bielefeld-CeBiTec_2014-09-29_Selongatus.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;"><i>Synechococcus</i> PCC 7002 in DIC microscopy. Imaging was performed with the Olympus BX61 microscope and a UPlanSApo 100× NA 1.40 oil immersion objective (Olympus). Pictures were acquired at room temperature in water with a camera (SPOT; Diagnostic Instruments, Inc.) using MetaMorph software (MDS Analytical Technologies).</font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>A coding sequence of this organism was used for the carbon dioxide fixation: | <p><br>A coding sequence of this organism was used for the carbon dioxide fixation: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
<table style="border-color:transparent" float="right;"> | <table style="border-color:transparent" float="right;"> | ||
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</div> | </div> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>BioBricks created with this organism:</td><td><a href="http://parts.igem.org/Part:BBa_K1465201" target="_blank">BBa_K1465201</a><br><a href="http://parts.igem.org/Part:BBa_K1465203" target="_blank">BBa_K1465203</a><br><a href="http://parts.igem.org/Part:BBa_K1465212" target="_blank">BBa_K1465212</a></td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
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<table style="background-color:transparent" float="right;"> | <table style="background-color:transparent" float="right;"> | ||
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<a href="https://static.igem.org/mediawiki/2014/4/4a/Bielefeld-CeBiTec_2014-09-29_Asuccinogenes.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/4/4a/Bielefeld-CeBiTec_2014-09-29_Asuccinogenes.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/4/4a/Bielefeld-CeBiTec_2014-09-29_Asuccinogenes.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/4/4a/Bielefeld-CeBiTec_2014-09-29_Asuccinogenes.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;"><i>Actinobacillus lignieresi</i>. Gram stain.</font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>A coding sequence of this organism was used for the transport of reduction equivalents: | <p><br>A coding sequence of this organism was used for the transport of reduction equivalents: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
<table style="border-color:transparent" float="right;"> | <table style="border-color:transparent" float="right;"> | ||
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</div> | </div> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>BioBricks created with this organism:</td><td><a href="http://parts.igem.org/Part:BBa_K1465103" target="_blank">BBa_K1465103</a><br><a href="http://parts.igem.org/Part:BBa_K1465104" target="_blank">BBa_K1465104</a><br><a href="http://parts.igem.org/Part:BBa_K1465105" target="_blank">BBa_K1465105</a></td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
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</div> | </div> | ||
<div class="content" style="font-size:17px"> | <div class="content" style="font-size:17px"> | ||
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+ | <tr> | ||
+ | <td width="30%"> | ||
</td> | </td> | ||
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<p><br>A coding sequence of this organism was used for the transport of electrons: | <p><br>A coding sequence of this organism was used for the transport of electrons: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
<table style="border-color:transparent" float="right;"> | <table style="border-color:transparent" float="right;"> | ||
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</div> | </div> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>BioBricks created with this organism:</td><td><a href="http://parts.igem.org/Part:BBa_K1465101" target="_blank">BBa_K1465101</a></td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
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<div class="content" style="font-size:17px"> | <div class="content" style="font-size:17px"> | ||
- | <div class="element" style="margin:10px; padding:10px; text-align:center; float:left"> | + | <div class="element" style="margin:10px; padding:10px; text-align:center; float:left; width:260px"> |
<a href="https://static.igem.org/mediawiki/2014/9/9a/Bielefeld-CeBiTec_2014-09-29_Smeliloti.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/9/9a/Bielefeld-CeBiTec_2014-09-29_Smeliloti.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/9/9a/Bielefeld-CeBiTec_2014-09-29_Smeliloti.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/9/9a/Bielefeld-CeBiTec_2014-09-29_Smeliloti.png" width="250px"></a> | ||
</div> | </div> | ||
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<table style="background-color:transparent" float="right;"> | <table style="background-color:transparent" float="right;"> | ||
<tr> | <tr> | ||
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- | <div class="element" style="margin:10px; padding:10px; text-align:center; float:left"> | + | <div class="element" style="margin:10px; padding:10px; text-align:center; float:left; width:260px"> |
<a href="https://static.igem.org/mediawiki/2014/9/92/Bielefeld-CeBiTec_2014-09-29_Cglutamicum.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/9/92/Bielefeld-CeBiTec_2014-09-29_Cglutamicum.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/9/92/Bielefeld-CeBiTec_2014-09-29_Cglutamicum.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/9/92/Bielefeld-CeBiTec_2014-09-29_Cglutamicum.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;">Phase contrast of <i>Corynebacterium glutamicum</i></font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>A coding sequence of this organism was used for an enzyme assay: | <p><br>A coding sequence of this organism was used for an enzyme assay: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
<table style="border-color:transparent" float="right;"> | <table style="border-color:transparent" float="right;"> | ||
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<table style="background-color:transparent" float="right;"> | <table style="background-color:transparent" float="right;"> | ||
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<a href="https://static.igem.org/mediawiki/2014/6/60/Bielefeld-CeBiTec_2014-09-30_Bmethanolicus.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/6/60/Bielefeld-CeBiTec_2014-09-30_Bmethanolicus.png" width="250px"></a> | <a href="https://static.igem.org/mediawiki/2014/6/60/Bielefeld-CeBiTec_2014-09-30_Bmethanolicus.png" target="_blank"><img src="https://static.igem.org/mediawiki/2014/6/60/Bielefeld-CeBiTec_2014-09-30_Bmethanolicus.png" width="250px"></a> | ||
+ | <br><font size="1" style="text-align:center;">Microscopic image of <i>Bacillus subtilis</i> (ATCC 6633). Gram staining, magnification:1,000. The oval unstained structures are spores.</font> | ||
</div> | </div> | ||
</td> | </td> | ||
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<p><br>A coding sequence of this organism was used for carbon dioxide fixation: | <p><br>A coding sequence of this organism was used for carbon dioxide fixation: | ||
<ul> | <ul> | ||
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</ul></p> | </ul></p> | ||
</td> | </td> | ||
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<div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px; float: right"> | ||
<table style="border-color:transparent" float="right;"> | <table style="border-color:transparent" float="right;"> | ||
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</div> | </div> | ||
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+ | </tr> | ||
+ | <tr> | ||
+ | <td>BioBricks created with this organism:</td><td><a href="http://parts.igem.org/Part:BBa_K1465228" target="_blank">BBa_K1465228</a><br><a href="http://parts.igem.org/Part:BBa_K1465229" target="_blank">BBa_K1465229</a><br></td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
Line 617: | Line 648: | ||
</div> | </div> | ||
+ | <div class="element" style="margin:10px 10px 10px 10px; padding:10px 10px 10px 10px"> | ||
+ | <div id="text"> | ||
+ | <h4 class="member" style="margin-left:20px">References</h4> | ||
+ | <p> | ||
+ | <ul> | ||
+ | <li><div class="element"><a href="http://en.wikipedia.org/wiki/Escherichia_coli" target="_blank">Wikipedia</a> - Escherichia coli - 09.29.14</div></li> | ||
+ | <li><div class="element"><a href="http://nl.wikipedia.org/wiki/Melkzuurbacteriën" target="_blank">Wikipedia</a> - Lactic acid bacteria - 09.29.14</div></li> | ||
+ | <li><div class="element"><a href="http://en.wikipedia.org/wiki/Carboxysome" target="_blank">Wikipedia</a> - Carboxysome - 09.29.14</div></li> | ||
+ | <li><div class="element"><a href="http://en.wikipedia.org/wiki/Bacillus_subtilis" target="_blank">Wikipedia</a> - Bacillus subtilis - 09.29.14</div></li> | ||
+ | <li><div class="element"><a href="http://en.wikipedia.org/wiki/Synechococcus" target="_blank">Wikipedia</a> - Synechococcus - 09.29.14</div></li> | ||
+ | <li><div class="element"><a href="http://de.wikipedia.org/wiki/Actinobacillus" target="_blank">Wikipedia</a> - Actinobacillus - 09.29.14</div></li> | ||
+ | <li><div class="element"><a href="http://de.wikipedia.org/wiki/Corynebacterium_glutamicum" target="_blank">Wikipedia</a> - Corynebacterium glutamicum - 09.29.14</div></li> | ||
+ | <li><div class="element"><a href="http://en.wikipedia.org/wiki/Bacillus" target="_blank">Wikipedia</a> - Bacillus - 09.29.14</div></li> | ||
+ | </ul> | ||
+ | </p> | ||
+ | </div></div> | ||
</html> | </html> |
Latest revision as of 17:52, 15 October 2014
Organisms
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BioBricks created with this organism: | BBa_K1465301 BBa_K1465302 BBa_K1465303 BBa_K1465304 BBa_K1465305 BBa_K1465306 BBa_K1465307 |
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BioBricks created with this organism: | BBa_K1465202 BBa_K1465204 BBa_K1465205 BBa_K1465206 BBa_K1465207 BBa_K1465208 BBa_K1465209 BBa_K1465213 BBa_K1465214 BBa_K1465222 BBa_K1465223 |
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BioBricks created with this organism: | BBa_K1465302 BBa_K1465303 BBa_K1465306 BBa_K1465307 |
Synechococcus PCC 7002 in DIC microscopy. Imaging was performed with the Olympus BX61 microscope and a UPlanSApo 100× NA 1.40 oil immersion objective (Olympus). Pictures were acquired at room temperature in water with a camera (SPOT; Diagnostic Instruments, Inc.) using MetaMorph software (MDS Analytical Technologies). |
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BioBricks created with this organism: | BBa_K1465201 BBa_K1465203 BBa_K1465212 |
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BioBricks created with this organism: | BBa_K1465103 BBa_K1465104 BBa_K1465105 |
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BioBricks created with this organism: | BBa_K1465101 |
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BioBricks created with this organism: | BBa_K1465228 BBa_K1465229 |
References
- Wikipedia - Escherichia coli - 09.29.14
- Wikipedia - Lactic acid bacteria - 09.29.14
- Wikipedia - Carboxysome - 09.29.14
- Wikipedia - Bacillus subtilis - 09.29.14
- Wikipedia - Synechococcus - 09.29.14
- Wikipedia - Actinobacillus - 09.29.14
- Wikipedia - Corynebacterium glutamicum - 09.29.14
- Wikipedia - Bacillus - 09.29.14