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Team:HZAU-China/Output
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| - | <a href="https://igem.org/Team.cgi?year=2014&team_name=HZAU-China"><img src="https://static.igem.org/mediawiki/2014/ | + | <a href="https://igem.org/Team.cgi?year=2014&team_name=HZAU-China"><img src="https://static.igem.org/mediawiki/2014/4/4c/Hzau-home-lllogo.png" alt="HZAU-China" /></a> |
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<li class="selected dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Project">Project</a> | <li class="selected dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Project">Project</a> | ||
<ul> | <ul> | ||
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/ | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Design"><span>-</span>Overview</a></li> |
| - | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Background"><span>-</span>Background</a></li> | |
<li><a href="https://2014.igem.org/Team:HZAU-China/Input"><span>-</span>Input module</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Input"><span>-</span>Input module</a></li> | ||
<li><a href="https://2014.igem.org/Team:HZAU-China/Processing"><span>-</span>Processing module</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Processing"><span>-</span>Processing module</a></li> | ||
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<li class="dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Review">Wetlab</a> | <li class="dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Review">Wetlab</a> | ||
<ul> | <ul> | ||
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/ | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Overview"><span>-</span>Overview</a></li> |
<li><a href="https://2014.igem.org/Team:HZAU-China/Construction"><span>-</span>Construction</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Construction"><span>-</span>Construction</a></li> | ||
<li><a href="https://2014.igem.org/Team:HZAU-China/Characterization"><span>-</span>Characterization</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Characterization"><span>-</span>Characterization</a></li> | ||
| + | <li><a href="https://2014.igem.org/Team:HZAU-China/Help"><span>-</span>Help each other</a></li> | ||
<li><a href="https://2014.igem.org/Team:HZAU-China/Protocol"><span>-</span>Protocol</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Protocol"><span>-</span>Protocol</a></li> | ||
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/Labnotes"><span>-</span>Labnotes</a></li> | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Labnotes"><span>-</span>Labnotes</a></li> |
</ul> | </ul> | ||
</li> | </li> | ||
<li class="dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Modeling">Modeling</a> | <li class="dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Modeling">Modeling</a> | ||
<ul> | <ul> | ||
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/ | + | <li><a href="https://2014.igem.org/Team:HZAU-China/MOverview"><span>-</span>Overview</a></li> |
<li><a href="https://2014.igem.org/Team:HZAU-China/Biological"><span>-</span>Biological processes</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Biological"><span>-</span>Biological processes</a></li> | ||
<li><a href="https://2014.igem.org/Team:HZAU-China/Comparison"><span>-</span>Comparison between different designs</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Comparison"><span>-</span>Comparison between different designs</a></li> | ||
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<li class="dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Achievements">Achievements</a> | <li class="dropdown"><a href="https://2014.igem.org/Team:HZAU-China/Achievements">Achievements</a> | ||
<ul> | <ul> | ||
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/Achievements"><span>-</span> | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Achievements"><span>-</span>Judgement</a></li> |
<li><a href="https://2014.igem.org/Team:HZAU-China/Parts"><span>-</span>Parts</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Parts"><span>-</span>Parts</a></li> | ||
</ul> | </ul> | ||
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<li><a href="https://2014.igem.org/Team:HZAU-China/Collaboration"><span>-</span>Collaboration</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Collaboration"><span>-</span>Collaboration</a></li> | ||
<li><a href="https://2014.igem.org/Team:HZAU-China/Meetup"><span>-</span>Meetup</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Meetup"><span>-</span>Meetup</a></li> | ||
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/Humanities"><span>-</span>Humanities | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Humanities"><span>-</span>Humanities</a></li> |
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/Economics"><span>-</span> | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Economics"><span>-</span>Social Sciences</a></li> |
| - | <li><a href="https://2014.igem.org/Team:HZAU-China/Pubic outreach"><span>-</span> | + | <li><a href="https://2014.igem.org/Team:HZAU-China/Pubic outreach"><span>-</span>Public outreach</a></li> |
<li><a href="https://2014.igem.org/Team:HZAU-China/Safety"><span>-</span>Safety</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Safety"><span>-</span>Safety</a></li> | ||
<li><a href="https://2014.igem.org/Team:HZAU-China/Social media"><span>-</span>Social media</a></li> | <li><a href="https://2014.igem.org/Team:HZAU-China/Social media"><span>-</span>Social media</a></li> | ||
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<div id="breadcrumb-content"> | <div id="breadcrumb-content"> | ||
<ul> | <ul> | ||
| - | <li><a href=" | + | <li><a href="https://2014.igem.org/Team:HZAU-China">Home</a></li> |
| - | <li | + | <li>Project</li> |
| - | <li | + | <li>Output module</li> |
</ul> | </ul> | ||
</div> | </div> | ||
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<div class="offset-by-one columns"> | <div class="offset-by-one columns"> | ||
| + | <h3 style="text-align:center">Output Module</h3> | ||
<p class="highlighttext">In the first stage, the output module is the fluorescent indicator that can monitor the real-time processes of our system. Once its function is confirmed, we can use other functional parts as output to solve real world problems.</p> | <p class="highlighttext">In the first stage, the output module is the fluorescent indicator that can monitor the real-time processes of our system. Once its function is confirmed, we can use other functional parts as output to solve real world problems.</p> | ||
<h5>RNA level fluorescence</h5> | <h5>RNA level fluorescence</h5> | ||
| - | <p class="highlighttext">Beside fluorescent proteins, we try to use an RNA-fluorophore complex (Paige et al., 2011) to monitor the real-time processes. The complex contains RNA aptamers and some corresponding fluorophores. We synthesized the fluorophore 3,5-dimethoxy-4- hydroxybenzylidene imidazolinone (DHMBI), because several aptamers were identified that exhibited markedly different spectral properties when they bound to DHMBI. We also synthesized the 13-2min sequence, one of the aptamers that can interact with DHMBI, with a modified tRNA scaffold, which can | + | <p class="highlighttext">Beside fluorescent proteins, we try to use an RNA-fluorophore complex (Paige <span style="font-style:italic;">et al.</span>, 2011) to monitor the real-time processes. The complex contains RNA aptamers and some corresponding fluorophores. We synthesized the fluorophore 3,5-dimethoxy-4-hydroxybenzylidene imidazolinone (DHMBI), because several aptamers were identified that exhibited markedly different spectral properties when they bound to DHMBI. We also synthesized the 13-2min sequence, one of the aptamers that can interact with DHMBI, with a modified tRNA scaffold, which can stabilize the structure.</p> |
<img src="https://static.igem.org/mediawiki/2014/d/d4/Hzau-project-5_meitu_1.jpg" width="600px" class="img-center"/> | <img src="https://static.igem.org/mediawiki/2014/d/d4/Hzau-project-5_meitu_1.jpg" width="600px" class="img-center"/> | ||
| - | <p class="figuretext">Figure 1 | + | <p class="figuretext">Figure 1. The resulting image under the fluorescent microscope.</p> |
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<div class="clear"></div> | <div class="clear"></div> | ||
<div class="divider"></div> | <div class="divider"></div> | ||
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| + | <h5>References</h5> | ||
| + | <p class="highlighttext">Paige, J. S., Wu, K. Y., & Jaffrey, S. R. (2011). RNA mimics of green fluorescent protein. Science, 333(6042), 642-646.</p> | ||
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</div> | </div> | ||
</div> | </div> | ||
Latest revision as of 03:36, 18 October 2014
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Output module
Output Module
In the first stage, the output module is the fluorescent indicator that can monitor the real-time processes of our system. Once its function is confirmed, we can use other functional parts as output to solve real world problems.
RNA level fluorescence
Beside fluorescent proteins, we try to use an RNA-fluorophore complex (Paige et al., 2011) to monitor the real-time processes. The complex contains RNA aptamers and some corresponding fluorophores. We synthesized the fluorophore 3,5-dimethoxy-4-hydroxybenzylidene imidazolinone (DHMBI), because several aptamers were identified that exhibited markedly different spectral properties when they bound to DHMBI. We also synthesized the 13-2min sequence, one of the aptamers that can interact with DHMBI, with a modified tRNA scaffold, which can stabilize the structure.
Figure 1. The resulting image under the fluorescent microscope.
References
Paige, J. S., Wu, K. Y., & Jaffrey, S. R. (2011). RNA mimics of green fluorescent protein. Science, 333(6042), 642-646.
