Team:UCL/Science/Sequences
From 2014.igem.org
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- | <h4><a name="LiP" href="http://parts.igem.org/Part:BBa_K500000">[Improvement] LiP Part-only sequence (1116bp) [Link, see DT]</a></h4> | + | <h4><a name="LiP" href="http://parts.igem.org/Part:BBa_K500000">[Improvement] LiP Part-only sequence (1116bp) [Link, see DT]</a></h4> |
<p class="widthCorrect">Sequence taken from the initial page; not currently showing our improvements.</p> | <p class="widthCorrect">Sequence taken from the initial page; not currently showing our improvements.</p> | ||
<font size="2"><table class="table table-striped table-bordered"> | <font size="2"><table class="table table-striped table-bordered"> | ||
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http://parts.igem.org/wiki/index.php?title=Part:BBa_K729006 (1612bp) Device. | http://parts.igem.org/wiki/index.php?title=Part:BBa_K729006 (1612bp) Device. | ||
http://parts.igem.org/wiki/index.php?title=Part:BBa_K729002 (1551bp) Part-only.--> | http://parts.igem.org/wiki/index.php?title=Part:BBa_K729002 (1551bp) Part-only.--> | ||
- | <h4><a name="Laccase" href="http://parts.igem.org/Part:BBa_K729006">[Improvement] Laccase Part-only sequence ( | + | <h4><a name="Laccase" href="http://parts.igem.org/Part:BBa_K729006">[Improvement] Laccase Part-only sequence (1612bp) [Link, see DT]</a></h4> |
<p class="widthCorrect">Sequence taken from the initial page; not currently showing our improvements.</p> | <p class="widthCorrect">Sequence taken from the initial page; not currently showing our improvements.</p> | ||
<font size="2"><table class="table table-striped table-bordered"> | <font size="2"><table class="table table-striped table-bordered"> | ||
<tr> | <tr> | ||
<td style="text-align:right;"> | <td style="text-align:right;"> | ||
- | + | <pre>1<br />100<br />199<br />298<br />397<br />496<br />595<br />694<br />793<br />892<br />991<br />1090<br />1189<br />1288<br />1387<br />1486<br />1585</pre> | |
</td> | </td> | ||
<td style="text-align:left;"> | <td style="text-align:left;"> | ||
- | + | <pre>TTG ACA GCT AGC TCA GTC CTA GGT ATA ATG CTA GCT ACT AGA GAA AGA GGA GAA ATA CTA GAT GCA ACG TCG TGA TTT CTT AAA ATA TTC CGT CGC GCT <br />GGG TGT GGC TTC GGC TTT GCC GCT GTG GAG CCG CGC AGT ATT TGC GGC AGA ACG CCC AAC GTT ACC GAT CCC TGA TTT GCT CAC GAC CGA TGC CCG TAA <br />TCG CAT TCA GTT AAC TAT TGG CGC AGG CCA GTC CAC CTT TGG CGG GAA AAC TGC AAC TAC CTG GGG CTA TAA CGG CAA TCT GCT GGG GCC GGC GGT GAA <br />ATT ACA GCG CGG CAA AGC GGT AAC GGT TGA TAT CTA CAA CCA ACT GAC GGA AGA GAC AAC GTT GCA CTG GCA CGG GCT GGA AGT ACC GGG TGA AGT CGA <br />CGG CGG CCC GCA GGG AAT TAT TCC GCC AGG TGG CAA GCG CTC GGT GAC GTT GAA CGT TGA TCA ACC TGC CGC TAC CTG CTG GTT CCA TCC GCA TCA GCA <br />CGG CAA AAC CGG GCG ACA GGT GGC GAT GGG GCT GGC TGG GCT GGT GGT GAT TGA AGA TGA CGA GAT CCT GAA ATT AAT GCT GCC AAA ACA GTG GGG TAT <br />CGA TGA TGT TCC GGT GAT CGT TCA GGA TAA GAA ATT TAG CGC CGA CGG GCA GAT TGA TTA TCA ACT GGA TGT GAT GAC CGC CGC CGT GGG CTG GTT TGG <br />CGA TAC GTT GCT GAC CAA CGG TGC AAT CTA CCC GCA ACA CGC TGC CCC GCG TGG TTG GCT GCG CCT GCG TTT GCT CAA TGG CTG TAA TGC CCG TTC GCT <br />CAA TTT CGC CAC CAG CGA CAA TCG CCC GCT GTA TGT GAT TGC CAG CGA CGG TGG TCT GCT ACC TGA ACC AGT GAA GGT GAG CGA ACT GCC GGT GCT GAT <br />GGG CGA GCG TTT TGA AGT GCT GGT GGA GGT TAA CGA TAA CAA ACC CTT TGA CCT GGT GAC GCT GCC GGT CAG CCA GAT GGG GAT GGC GAT TGC GCC GTT <br />TGA TAA GCC TCA TCC GGT AAT GCG GAT TCA GCC GAT TGC TAT TAG TGC CTC CGG TGC TTT GCC AGA CAC ATT AAG TAG CCT GCC TGC GTT ACC TTC GCT <br />GGA AGG GCT GAC GGT ACG CAA GCT GCA ACT CTC TAT GGA CCC GAT GCT CGA TAT GAT GGG GAT GCA GAT GCT AAT GGA GAA ATA TGG CGA TCA GGC GAT <br />GGC CGG GAT GGA TCA CAG CCA GAT GAT GGG CCA TAT GGG GCA CGG CAA TAT GAA TCA TAT GAA CCA CGG CGG GAA GTT CGA TTT CCA CCA TGC CAA CAA <br />AAT CAA CGG TCA GGC GTT TGA TAT GAA CAA GCC GAT GTT TGC GGC GGC GAA AGG GCA ATA CGA ACG TTG GGT TAT CTC TGG CGT GGG CGA CAT GAT GCT <br />GCA TCC GTT CCA TAT CCA CGG CAC GCA GTT CCG TAT CTT GTC AGA AAA TGG CAA ACC GCC AGC GGC TCA TCG CGC GGG CTG GAA AGA TAC CGT TAA GGT <br />AGA AGG TAA TGT CAG CGA AGT GCT GGT GAA GTT TAA TCA CGA TGC ACC GAA AGA ACA TGC TTA TAT GGC GCA CTG CCA TCT GCT GGA GCA TGA AGA TAC <br />GGG GAT GAT GTT AGG GTT TAC GGT ATA A</pre> | |
</td> | </td> | ||
</tr> | </tr> | ||
</table></font> | </table></font> | ||
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- | <h4><a name="ispB" href="http://parts.igem.org/Part: ">[New] ispB Part-only sequence (972bp) [Link, see EG]</a></h4> | + | <h4><a name="ispB" href="http://parts.igem.org/Part: ">[New] ispB Part-only sequence (972bp) [Link, see EG]</a></h4> |
- | <p class="widthCorrect">Sequence shows the <a href="http://www.ncbi.nlm.nih.gov/protein/16131077">ispB gene</a>, but we use the <a href="/Team:UCL/Science/Sequences#ispB_RC">Reverse Complement</a> to design primers to produce an antisense fragment for <a href="http://jb.asm.org/content/179/9/3058.short">gene knockdown</a> (i.e. as RNAi).<font size="2">< | + | <p class="widthCorrect">Sequence shows the <a href="http://www.ncbi.nlm.nih.gov/protein/16131077">ispB gene</a>, but we use the <a href="/Team:UCL/Science/Sequences#ispB_RC">Reverse Complement</a> to design primers to produce an antisense fragment for <a href="http://jb.asm.org/content/179/9/3058.short">gene knockdown</a> (i.e. as RNAi).</p> |
- | + | <font size="2"><table class="table table-striped table-bordered"> | |
- | + | <tr> | |
- | + | <td style="text-align:right;"> | |
- | + | <pre>1<br />100<br />199<br />298<br />397<br />496<br />595<br />694<br />793<br />892</pre> | |
- | + | </td> | |
- | + | <td style="text-align:left;"> | |
- | + | <pre>ATG AAT TTA GAA AAA ATC AAT GAG TTA ACC GCG CAA GAT ATG GCG GGT GTT AAT GCG GCA ATC CTT GAG CAG CTT AAT TCC GAC GTC CAA CTG ATC AAT <br />CAG TTA GGC TAT TAC ATC GTC AGC GGC GGC GGT AAA CGT ATT CGT CCG ATG ATT GCT GTA CTG GCT GCA CGA GCT GTT GGC TAT GAG GGA AAT GCG CAT <br />GTC ACC ATT GCT GCC CTG ATC GAG TTT ATC CAC ACG GCG ACT CTG CTA CAC GAC GAC GTT GTG GAT GAA TCA GAT ATG CGC AGG GGT AAA GCT ACC GCC <br />AAC GCC GCA TTT GGC AAT GCC GCC AGC GTG CTG GTA GGC GAT TTT ATT TAT ACC CGC GCT TTC CAG ATG ATG ACC AGC CTC GGT TCG CTC AAA GTG CTG <br />GAA GTC ATG TCA GAA GCC GTA AAC GTC ATC GCA GAA GGT GAA GTT CTG CAA CTG ATG AAC GTT AAC GAT CCG GAC ATC ACT GAA GAA AAC TAC ATG CGC <br />GTT ATC TAT AGC AAA ACC GCG CGT CTG TTT GAG GCT GCC GCG CAG TGT TCC GGG ATT CTG GCT GGC TGT ACG CCG GAG GAG GAG AAA GGC CTG CAG GAT <br />TAT GGG CGC TAT CTC GGC ACT GCT TTC CAG TTG ATC GAC GAT TTA CTC GAT TAC AAT GCC GAT GGC GAA CAG TTA GGT AAA AAT GTC GGC GAC GAT CTG <br />AAC GAA GGT AAA CCG ACG CTG CCG CTG CTG CAT GCG ATG CAT CAT GGC ACA CCA GAA CAG GCA CAG ATG ATC CGT ACC GCC ATC GAA CAG GGT AAC GGT <br />CGC CAT CTT CTG GAA CCG GTT CTG GAA GCA ATG AAC GCT TGT GGA TCT CTT GAA TGG ACG CGT CAG CGT GCC GAG GAA GAA GCA GAC AAA GCC ATC GCA <br />GCG TTA CAG GTG CTC CCG GAC ACC CCT TGG CGA GAA GCA CTC ATC GGC CTC GCG CAC ATC GCT GTT CAA CGC GAT CGT TAA </pre> | |
- | + | </td> | |
- | + | </tr> | |
- | + | </table></font> | |
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<br> | <br> | ||
- | <h4><a name="ispB_RC" href="http://parts.igem.org/Part: ">[New] ispB Reverse Complement Part-only sequence (972bp) [Link, see DT]</a></h4> | + | <h4><a name="ispB_RC" href="http://parts.igem.org/Part: ">[New] ispB Reverse Complement Part-only sequence (972bp) [Link, see DT]</a></h4> |
- | <p class="widthCorrect"><font size="2">< | + | <p class="widthCorrect">...</p> |
- | + | <font size="2"><table class="table table-striped table-bordered"> | |
- | + | <tr> | |
- | + | <td style="text-align:right;"> | |
- | + | <pre>1<br />100<br />199<br />298<br />397<br />496<br />595<br />694<br />793<br />892</pre> | |
- | + | </td> | |
- | + | <td style="text-align:left;"> | |
- | + | <pre>TTA ACG ATC GCG TTG AAC AGC GAT GTG CGC GAG GCC GAT GAG TGC TTC TCG CCA AGG GGT GTC CGG GAG CAC CTG TAA CGC TGC GAT GGC TTT GTC TGC <br />TTC TTC CTC GGC ACG CTG ACG CGT CCA TTC AAG AGA TCC ACA AGC GTT CAT TGC TTC CAG AAC CGG TTC CAG AAG ATG GCG ACC GTT ACC CTG TTC GAT <br />GGC GGT ACG GAT CAT CTG TGC CTG TTC TGG TGT GCC ATG ATG CAT CGC ATG CAG CAG CGG CAG CGT CGG TTT ACC TTC GTT CAG ATC GTC GCC GAC ATT <br />TTT ACC TAA CTG TTC GCC ATC GGC ATT GTA ATC GAG TAA ATC GTC GAT CAA CTG GAA AGC AGT GCC GAG ATA GCG CCC ATA ATC CTG CAG GCC TTT CTC <br />CTC CTC CGG CGT ACA GCC AGC CAG AAT CCC GGA ACA CTG CGC GGC AGC CTC AAA CAG ACG CGC GGT TTT GCT ATA GAT AAC GCG CAT GTA GTT TTC TTC <br />AGT GAT GTC CGG ATC GTT AAC GTT CAT CAG TTG CAG AAC TTC ACC TTC TGC GAT GAC GTT TAC GGC TTC TGA CAT GAC TTC CAG CAC TTT GAG CGA ACC <br />GAG GCT GGT CAT CAT CTG GAA AGC GCG GGT ATA AAT AAA ATC GCC TAC CAG CAC GCT GGC GGC ATT GCC AAA TGC GGC GTT GGC GGT AGC TTT ACC CCT <br />GCG CAT ATC TGA TTC ATC CAC AAC GTC GTC GTG TAG CAG AGT CGC CGT GTG GAT AAA CTC GAT CAG GGC AGC AAT GGT GAC ATG CGC ATT TCC CTC ATA <br />GCC AAC AGC TCG TGC AGC CAG TAC AGC AAT CAT CGG ACG AAT ACG TTT ACC GCC GCC GCT GAC GAT GTA ATA GCC TAA CTG ATT GAT CAG TTG GAC GTC <br />GGA ATT AAG CTG CTC AAG GAT TGC CGC ATT AAC ACC CGC CAT ATC TTG CGC GGT TAA CTC ATT GAT TTT TTC TAA ATT CAT </pre> | |
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<br> | <br> | ||
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<h3>Plasmid Backbone / Vectors</h3> | <h3>Plasmid Backbone / Vectors</h3> | ||
<h4><a name="pET21a+" href="http://www.addgene.org/browse/sequence_vdb/2549/">pET-21a (+) sequence (Xbp) [Link, see DT]</a></h4> | <h4><a name="pET21a+" href="http://www.addgene.org/browse/sequence_vdb/2549/">pET-21a (+) sequence (Xbp) [Link, see DT]</a></h4> | ||
- | <p class="widthCorrect"><font size="2"><code>atccggatatagttcctcctttcagcaaaaaacccctcaagacccgtttagaggccccaaggggttatgctagttattgc | + | <p class="widthCorrect">...</p> |
+ | <font size="2"><table class="table table-striped table-bordered"> | ||
+ | <tr> | ||
+ | <td style="text-align:right;"> | ||
+ | |||
+ | </td> | ||
+ | <td style="text-align:left;"> | ||
+ | |||
+ | </td> | ||
+ | </tr> | ||
+ | </table></font> | ||
+ | <br> | ||
+ | |||
+ | <font size="2"><code>atccggatatagttcctcctttcagcaaaaaacccctcaagacccgtttagaggccccaaggggttatgctagttattgc | ||
tcagcggtggcagcagccaactcagcttcctttcgggctttgttagcagccggatctcagtggtggtggtggtggtgctc | tcagcggtggcagcagccaactcagcttcctttcgggctttgttagcagccggatctcagtggtggtggtggtggtgctc | ||
gagtgcggccgcaagcttgtcgacggagctcgaattcggatccgcgacccatttgctgtccaccagtcatgctagccata | gagtgcggccgcaagcttgtcgacggagctcgaattcggatccgcgacccatttgctgtccaccagtcatgctagccata |
Revision as of 23:04, 28 September 2014
Gene and BioBrick Part Sequences
Laboratory Team
Summary
For ease of reference, the sequences for (1) our BioBrick Gene Designs, (2) Plasmid / Vector Backbones, and (3) BioBricks that we have used from that iGEM Registry Distribution, have been provided below. Clicking on the Gene/Plasmid/BioBrick headers will take you to pages describing the part in more detail and the source of the sequences.
Note: format is a little horrendous, will change to all CAPS, and at a set width (70-75 char), and add "br" for all later.
BioBrick Designs for Our Genes
[New] AzoR Part-only sequence (612bp) [Link, see DT]
Sequence taken from Lisbon.
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ATG AAA CTG TTG CAC ATC GAT TCG AGC ATC CTG GGC GAC AAT TCC GCC TCG CGT CAG CTG AGC CGT GAA GTG GTC GAA GCC TGG AAG GCT GCA GAC CCA |
[New] AzoR 1B6 (heat-stable AzoR mutant) Part-only sequence (612bp) [Link, see DT]
Sequence given from Lisbon group directly.
1 |
ATG AAA CTG TTG CAC ATC GAT TCG AGC ATC CTG GGC GAC AAT TCC GCC TCG CGC CAG CTG AGC CGT GAA GTG GTC GAA GCC TGG AAG GCT GCA GAC CCA |
[Proposed] CotA Part-only sequence (1542bp) [Link, see DT]
Sequence given from Lisbon group directly.
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ATG ACA CTT GAA AAA TTT GTG GAT GCT CTC CCA ATC CCA GAT ACA CTA AAG CCA GTA CAG CAA TCA AAA GAA AAA ACA TAC TAC GAA GTC ACC ATG GAG |
[New] BsDyP Part-only sequence (1251bp) [Link, see DT]
Sequence given from Lisbon group directly.
1 |
ATG AGC GAT GAA CAG AAA AAG CCA GAA CAA ATT CAC AGA CGG GAC ATT TTA AAA TGG GGA GCG ATG GCG GGG GCA GCC GTT GCG ATC GGT GCC AGC GGT |
[Proposed] PpDyP Part-only sequence (864bp) [Link, see DT]
Sequence taken from Lisbon.
1 |
ATG CCG TTC CAG CAA GGT CTG CTT GCC ACC CCG GTG CCG GCC CAC GCC CGT CAC CTG TTC TTC ACC CTG CAG TCG CCC GAG GCG TTG CCT GCC GCG CTG |
[Improvement] LiP Part-only sequence (1116bp) [Link, see DT]
Sequence taken from the initial page; not currently showing our improvements.
1 |
ATG GCT TTT AAA CAA TTA TTC GCC GCT ATT TCC TTG GCT TTG TCT TTG TCT GCT GCT AAT GCT GCT GCT GTT ATT GAA AAA AGA GCT ACT TGT TCC AAC |
[Improvement] Laccase Part-only sequence (1612bp) [Link, see DT]
Sequence taken from the initial page; not currently showing our improvements.
1 |
TTG ACA GCT AGC TCA GTC CTA GGT ATA ATG CTA GCT ACT AGA GAA AGA GGA GAA ATA CTA GAT GCA ACG TCG TGA TTT CTT AAA ATA TTC CGT CGC GCT |
[New] ispB Part-only sequence (972bp) [Link, see EG]
Sequence shows the ispB gene, but we use the Reverse Complement to design primers to produce an antisense fragment for gene knockdown (i.e. as RNAi).
1 |
ATG AAT TTA GAA AAA ATC AAT GAG TTA ACC GCG CAA GAT ATG GCG GGT GTT AAT GCG GCA ATC CTT GAG CAG CTT AAT TCC GAC GTC CAA CTG ATC AAT |
[New] ispB Reverse Complement Part-only sequence (972bp) [Link, see DT]
...
1 |
TTA ACG ATC GCG TTG AAC AGC GAT GTG CGC GAG GCC GAT GAG TGC TTC TCG CCA AGG GGT GTC CGG GAG CAC CTG TAA CGC TGC GAT GGC TTT GTC TGC |
Plasmid Backbone / Vectors
pET-21a (+) sequence (Xbp) [Link, see DT]
...
atccggatatagttcctcctttcagcaaaaaacccctcaagacccgtttagaggccccaaggggttatgctagttattgc
tcagcggtggcagcagccaactcagcttcctttcgggctttgttagcagccggatctcagtggtggtggtggtggtgctc
gagtgcggccgcaagcttgtcgacggagctcgaattcggatccgcgacccatttgctgtccaccagtcatgctagccata
tgtatatctccttcttaaagttaaacaaaattatttctagaggggaattgttatccgctcacaattcccctatagtgagt
cgtattaatttcgcgggatcgagatctcgatcctctacgccggacgcatcgtggccggcatcaccggcgccacaggtgcg
gttgctggcgcctatatcgccgacatcaccgatggggaagatcgggctcgccacttcgggctcatgagcgcttgtttcgg
cgtgggtatggtggcaggccccgtggccgggggactgttgggcgccatctccttgcatgcaccattccttgcggcggcgg
tgctcaacggcctcaacctactactgggctgcttcctaatgcaggagtcgcataagggagagcgtcgagatcccggacac
catcgaatggcgcaaaacctttcgcggtatggcatgatagcgcccggaagagagtcaattcagggtggtgaatgtgaaac
cagtaacgttatacgatgtcgcagagtatgccggtgtctcttatcagaccgtttcccgcgtggtgaaccaggccagccac
gtttctgcgaaaacgcgggaaaaagtggaagcggcgatggcggagctgaattacattcccaaccgcgtggcacaacaact
ggcgggcaaacagtcgttgctgattggcgttgccacctccagtctggccctgcacgcgccgtcgcaaattgtcgcggcga
ttaaatctcgcgccgatcaactgggtgccagcgtggtggtgtcgatggtagaacgaagcggcgtcgaagcctgtaaagcg
gcggtgcacaatcttctcgcgcaacgcgtcagtgggctgatcattaactatccgctggatgaccaggatgccattgctgt
ggaagctgcctgcactaatgttccggcgttatttcttgatgtctctgaccagacacccatcaacagtattattttctccc
atgaagacggtacgcgactgggcgtggagcatctggtcgcattgggtcaccagcaaatcgcgctgttagcgggcccatta
agttctgtctcggcgcgtctgcgtctggctggctggcataaatatctcactcgcaatcaaattcagccgatagcggaacg
ggaaggcgactggagtgccatgtccggttttcaacaaaccatgcaaatgctgaatgagggcatcgttcccactgcgatgc
tggttgccaacgatcagatggcgctgggcgcaatgcgcgccattaccgagtccgggctgcgcgttggtgcggatatctcg
gtagtgggatacgacgataccgaagacagctcatgttatatcccgccgttaaccaccatcaaacaggattttcgcctgct
ggggcaaaccagcgtggaccgcttgctgcaactctctcagggccaggcggtgaagggcaatcagctgttgcccgtctcac
tggtgaaaagaaaaaccaccctggcgcccaatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctg
gcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtaagttagctcactcattaggcaccgg
gatctcgaccgatgcccttgagagccttcaacccagtcagctccttccggtgggcgcggggcatgactatcgtcgccgca
cttatgactgtcttctttatcatgcaactcgtaggacaggtgccggcagcgctctgggtcattttcggcgaggaccgctt
tcgctggagcgcgacgatgatcggcctgtcgcttgcggtattcggaatcttgcacgccctcgctcaagccttcgtcactg
gtcccgccaccaaacgtttcggcgagaagcaggccattatcgccggcatggcggccccacgggtgcgcatgatcgtgctc
ctgtcgttgaggacccggctaggctggcggggttgccttactggttagcagaatgaatcaccgatacgcgagcgaacgtg
aagcgactgctgctgcaaaacgtctgcgacctgagcaacaacatgaatggtcttcggtttccgtgtttcgtaaagtctgg
aaacgcggaagtcagcgccctgcaccattatgttccggatctgcatcgcaggatgctgctggctaccctgtggaacacct
acatctgtattaacgaagcgctggcattgaccctgagtgatttttctctggtcccgccgcatccataccgccagttgttt
accctcacaacgttccagtaaccgggcatgttcatcatcagtaacccgtatcgtgagcatcctctctcgtttcatcggta
tcattacccccatgaacagaaatcccccttacacggaggcatcagtgaccaaacaggaaaaaaccgcccttaacatggcc
cgctttatcagaagccagacattaacgcttctggagaaactcaacgagctggacgcggatgaacaggcagacatctgtga
atcgcttcacgaccacgctgatgagctttaccgcagctgcctcgcgcgtttcggtgatgacggtgaaaacctctgacaca
tgcagctcccggagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccgtcagggcgcgtcagcgggt
gttggcgggtgtcggggcgcagccatgacccagtcacgtagcgatagcggagtgtatactggcttaactatgcggcatca
gagcagattgtactgagagtgcaccatatatgcggtgtgaaataccgcacagatgcgtaaggagaaaataccgcatcagg
cgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggc
ggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaacc
gtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcag
aggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgac
cctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatc
tcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatcc
ggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcag
agcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggta
tctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagc
ggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggg
gtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatcc
ttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatc
agtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgat
acgggagggcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaa
taaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgc
cgggaagctagagtaagtagttcgccagttaatagtttgcgcaacgttgttgccattgctgcaggcatcgtggtgtcacg
ctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaa
aagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagca
ctgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgaga
atagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaag
tgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaaccc
actcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgc
cgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatc
agggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacatttccc
cgaaaagtgccacctgaaattgtaaacgttaatattttgttaaaattcgcgttaaatttttgttaaatcagctcattttt
taaccaataggccgaaatcggcaaaatcccttataaatcaaaagaatagaccgagatagggttgagtgttgttccagttt
ggaacaagagtccactattaaagaacgtggactccaacgtcaaagggcgaaaaaccgtctatcagggcgatggcccacta
cgtgaaccatcaccctaatcaagttttttggggtcgaggtgccgtaaagcactaaatcggaaccctaaagggagcccccg
atttagagcttgacggggaaagccggcgaacgtggcgagaaaggaagggaagaaagcgaaaggagcgggcgctagggcgc
tggcaagtgtagcggtcacgctgcgcgtaaccaccacacccgccgcgcttaatgcgccgctacagggcgcgtcccattcg
cca
pSB1C3 Part-only sequence (2070bp)
tactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggct
tcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggata
acgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacga
gcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcct
gttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgt
aggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaag
acacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactac
ggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccg
ctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctca
gtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagctcgaggcttggattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagat
ggagttctgaggtcattactggatctatcaacaggagtccaagcgagctcgatatcaaattacgccccgccctgccactcatcgcagtactgttgtaatt
cattaagcattctgccgacatggaagccatcacaaacggcatgatgaacctgaatcgccagcggcatcagcaccttgtcgccttgcgtataatatttgcc
catggtgaaaacgggggcgaagaagttgtccatattggccacgtttaaatcaaaactggtgaaactcacccagggattggctgagacgaaaaacatattc
tcaataaaccctttagggaaataggccaggttttcaccgtaacacgccacatcttgcgaatatatgtgtagaaactgccggaaatcgtcgtggtattcac
tccagagcgatgaaaacgtttcagtttgctcatggaaaacggtgtaacaagggtgaacactatcccatatcaccagctcaccgtctttcattgccatacg
aaattccggatgagcattcatcaggcgggcaagaatgtgaataaaggccggataaaacttgtgcttatttttctttacggtctttaaaaaggccgtaata
tccagctgaacggtctggttataggtacattgagcaactgactgaaatgcctcaaaatgttctttacgatgccattgggatatatcaacggtggtatatc
cagtgatttttttctccattttagcttccttagctcctgaaaatctcgataactcaaaaaatacgcccggtagtgatcttatttcattatggtgaaagtt
ggaacctcttacgtgcccgatcaactcgagtgccacctgacgtctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggca
gaatttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagag
pSB1A3 Part-only sequence (2155bp)
tactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggct
tcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggata
acgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacga
gcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcct
gttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgt
aggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaag
acacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactac
ggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccg
ctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctca
gtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcct
gactccccgtcgtgtagataactacgatacgggagggcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagattt
atcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctaga
gtaagtagttcgccagttaatagtttgcgcaacgttgttgccattgctacaggcatcgtggtgtcacgctcgtcgtttggtatggcttcattcagctccg
gttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgc
agtgttatcactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtca
ttctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaagtgctcatcattg
gaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatataacccactcgtgcacccaactgatcttcagcatcttt
tactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttc
ctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgca
catttccccgaaaagtgccacctgacgtctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggcagaatttcagataaaa
aaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagag
pSB1K3 Part-only sequence (2204bp)
tactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggct
tcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggata
acgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacga
gcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcct
gttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgt
aggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaag
acacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactac
ggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccg
ctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctca
gtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagctcgagtcccgtcaagtcagcgtaatgctctgccagtgttacaaccaattaaccaattctgattagaa
aaactcatcgagcatcaaatgaaactgcaatttattcatatcaggattatcaataccatatttttgaaaaagccgtttctgtaatgaaggagaaaactca
ccgaggcagttccataggatggcaagatcctggtatcggtctgcgattccgactcgtccaacatcaatacaacctattaatttcccctcgtcaaaaataa
ggttatcaagtgagaaatcaccatgagtgacgactgaatccggtgagaatggcaaaagcttatgcatttctttccagacttgttcaacaggccagccatt
acgctcgtcatcaaaatcactcgcatcaaccaaaccgttattcattcgtgattgcgcctgagcgagacgaaatacgcgatcgctgttaaaaggacaatta
caaacaggaatcgaatgcaaccggcgcaggaacactgccagcgcatcaacaatattttcacctgaatcaggatattcttctaatacctggaatgctgttt
tcccggggatcgcagtggtgagtaaccatgcatcatcaggagtacggataaaatgcttgatggtcggaagaggcataaattccgtcagccagtttagtct
gaccatctcatctgtaacatcattggcaacgctacctttgccatgtttcagaaacaactctggcgcatcgggcttcccatacaatcgatagattgtcgca
cctgattgcccgacattatcgcgagcccatttatacccatataaatcagcatccatgttggaatttaatcgcggcctggagcaagacgtttcccgttgaa
tatggctcataacaccccttgtattactgtttatgtaagcagacagttttattgttcatgatgatatatttttatcttgtgcaatgtaacatcagagatt
ttgagacacaacgtggctttgttgaataaatcgaacttttgctgagttgaaggatcagctcgagtgccacctgacgtctaagaaaccattattatcatga
cattaacctataaaaataggcgtatcacgaggcagaatttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttct
agag
BioBricks from iGEM Parts Registry Distributions
[Test use] J04450 Part-only sequence (1069bp)
caatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaat
taatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacaca
tactagagaaagaggagaaatactagatggcttcctccgaagacgttatcaaagagttcatgcgtttcaaagttcgtatggaaggttccgttaacggtca
cgagttcgaaatcgaaggtgaaggtgaaggtcgtccgtacgaaggtacccagaccgctaaactgaaagttaccaaaggtggtccgctgccgttcgcttgg
gacatcctgtccccgcagttccagtacggttccaaagcttacgttaaacacccggctgacatcccggactacctgaaactgtccttcccggaaggtttca
aatgggaacgtgttatgaacttcgaagacggtggtgttgttaccgttacccaggactcctccctgcaagacggtgagttcatctacaaagttaaactgcg
tggtaccaacttcccgtccgacggtccggttatgcagaaaaaaaccatgggttgggaagcttccaccgaacgtatgtacccggaagacggtgctctgaaa
ggtgaaatcaaaatgcgtctgaaactgaaagacggtggtcactacgacgctgaagttaaaaccacctacatggctaaaaaaccggttcagctgccgggtg
cttacaaaaccgacatcaaactggacatcacctcccacaacgaagactacaccatcgttgaacagtacgaacgtgctgaaggtcgtcactccaccggtgc
ttaataacgctgatagtgctagtgtagatcgctactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgtt
gtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
[Used] K314103 Part-only sequence (1638bp)
acgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgcttt
cttcccttcctttctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgac
cccaaaaaacttgattagggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttaatagtg
gactcttgttccaaactggaacaacactcaaccctatctcggtctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatga
gctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgtttacaatttactagaggtggtgaatgtgaaaccagtaacgttatacgatgtcg
cagagtatgccggtgtctcttatcagaccgtttcccgcgtggtgaaccaggccagccacgtttctgcgaaaacgcgggaaaaagtggaagcggcgatggc
ggagctgaattacattcccaaccgcgtggcacaacaactggcgggcaaacagtcgttgctgattggcgttgccacctccagtctggccctgcacgcgccg
tcgcaaattgtcgcggcgattaaatctcgcgccgatcaactgggtgccagcgtggtggtgtcgatggtagaacgaagcggcgtcgaagcctgtaaagcgg
cggtgcacaatcttctcgcgcaacgcgtcagtgggctgatcattaactatccgctggatgaccaggatgccattgctgtggaagctgcctgcactaatgt
tccggcgttatttcttgatgtctctgaccagacacccatcaacagtattattttctcccatgaagacggtacgcgactgggcgtggagcatctggtcgca
ttgggtcaccagcaaatcgcgctgttagcgggcccattaagttctgtctcggcgcgtctgcgtctggctggctggcataaatatctcactcgcaatcaaa
ttcagccgatagcggaacgggaaggcgactggagtgccatgtccggttttcaacaaaccatgcaaatgctgaatgagggcatcgttcccactgcgatgct
ggttgccaacgatcagatggcgctgggcgcaatgcgcgccattaccgagtccgggctgcgcgttggtgcggacatctcggtagtgggatacgacgatacc
gaagacagctcatgttatatcccgccgttaaccaccatcaaacaggattttcgcctgctggggcaaaccagcgtggaccgcttgctgcaactctctcagg
gccaggcggtgaagggcaatcagctgttgcccgtctcactggtgaaaagaaaaaccaccctggcgcccaatacgcaaaccgcctctccccgcgcgttggc
cgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgatactagagaattgtgagcggataacaattgacattgtgagcggat
aacaagatactgagcacatactagagaaagaggagaaa
[Test use] R0010 Part-only sequence (200bp)
caatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaat
taatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacaca
[Not used] R0011 Part-only sequence (55bp)
aattgtgagcggataacaattgacattgtgagcggataacaagatactgagcaca
[Not used] K206000 Part-only sequence (130bp)
acattgattatttgcacggcgtcacactttgctatgccatagcaagatagtccataagattagcggatcctacctgacgctttttatcgcaactctctac
tgtttctccataccgtttttttgggctagc
[Test use] B0034 Part-only sequence (12bp)
aaagaggagaaa
[Test use] K518012 Part-only sequence (828bp)
tcacacaggaaagtactagatggcttcctccgaagacgttatcaaagagttcatgcgtttcaaagttcgtatggaaggttccgttaacggtcacgagttc
gaaatcgaaggtgaaggtgaaggtcgtccgtacgaaggtacccagaccgctaaactgaaagttaccaaaggtggtccgctgccgttcgcttgggacatcc
tgtccccgcagttccagtacggttccaaagcttacgttaaacacccggctgacatcccggactacctgaaactgtccttcccggaaggtttcaaatggga
acgtgttatgaacttcgaagacggtggtgttgttaccgttacccaggactcctccctgcaagacggtgagttcatctacaaagttaaactgcgtggtacc
aacttcccgtccgacggtccggttatgcagaaaaaaaccatgggttgggaagcttccaccgaacgtatgtacccggaagacggtgctctgaaaggtgaaa
tcaaaatgcgtctgaaactgaaagacggtggtcactacgacgctgaagttaaaaccacctacatggctaaaaaaccggttcagctgccgggtgcttacaa
aaccgacatcaaactggacatcacctcccacaacgaagactacaccatcgttgaacagtacgaacgtgctgaaggtcgtcactccaccggtgcttaataa
cgctgatagtgctagtgtagatcgctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagagagaatataaaaagcca
gattattaatccggcttttttattattt
[Not used] B0012 Part-only sequence (41bp)
tcacactggctcaccttcgggtgggcctttctgcgtttata
Full table
No. | ID | Name / Function | Source | State / Concentration / Date Made | Gene Size / Sequence | Initial Plasmid / Vector | Comments |
---|---|---|---|---|---|---|---|
1 | pAzoR / BBa_K1336000 | FMN-dependent NADH-azoreductase 1 | Pseudomonas putida | Miniprep,
48 ng/uL, 15/07/17, TO. |
597 bp [Check! Not 612 bp?],
Genomic Sequence |
Expression vector pET-21a (+) (ampicillin resistant (ampR)), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
2 | p1B6 (AzoR 1B6) / BBa_K1336001 | Mutant: Heat-stable; FMN-dependent NADH-azoreductase 1 | Pseudomonas putida | Miniprep,
68 ng/uL, 15/07/14, TO. |
597 bp [Check! Not 612 bp?],
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
3 | pCotA / BBa_K1336002 | Spore Coat Protein Laccase | Bacillus subtilis | Miniprep,
103 ng/uL, 15/07/14, TO. |
1733 bp [Check! Not 1539 bp?]
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NheI and BamHI. | Plasmid provided by Lisbon; with Paper. |
4 | LiP / BBa_K1336003 | Lignin Peroxidase | Phanerochaete chrysosporium (White-Rot Fungi) | [Being synthesised by Gene Oracle],
X ng/uL, dd/mm/yy, Gene Oracle. |
X bp,
Genomic Sequence |
[Cloned directly into expression vector, pSB1C3, between EcoRI and PstI.] | Synthesised (for free) by Gene Oracle. Sequence from Paper. |
5 | pBsDyP / BBa_K1336004 | Dye Decolourising Peroxidase BSU38260 | Bacillus subtilis | Miniprep,
51 ng/uL, 15/07/14, TO. |
1251 bp,
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
6 | pPpDyP / BBa_K1336005 | Dye Decolourising Peroxidase PP_3248 | Pseudomonas putida | Miniprep,
55 ng/uL, 15/07/14, TO. |
861 bp [Check! Not 864 bp?],
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
7 | BBa_J04450 | RFP Coding Device | Spring 2014 BioBrick Distribution.
Plate 4, Well 4B. [Check! DT?]. |
(1) Miniprep,
333 ng/uL, 01/07/14, TO. (2) Miniprep, 38 ng/uL (NanoDrop, dodgy!) 01/07/14, TO. |
1069 bp,
Genomic Sequence[Add sequence! Made from combined BioBricks?] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR). | LacI-, and CAP-, sensitive; can fail if system contains LacI or CAP protein!
RFP Coding Device contains: LacI (R0010), strong RBS (B0034), mRFP1 (E1010), and double terminator (B0015 = B0010+B0012). |
8 | BBa_R0010 | Promoter (LacI regulated) | Spring 2014 BioBrick Distribution.
Plate 3, Well 4G. [Check! DT?]. |
Miniprep,
329.1 ng/uL, 01/07/14, TO. |
200 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map. |
This part is an inverting regulator sensitive to LacI and CAP. In the absence of LacI and CAP proteins, this part promotes transcription; in their presence, the part inhibits transcription. LacI can be inhibited by IPTG. |
9 | BBa_R0011 | Promoter (LacI regulated, lambda pL hybrid) | Spring 2014 BioBrick Distribution.
Plate 2, Well 6D (Inconsistent sequencing!). [Check! DT? / Maybe use Spring 2013 Distribution, Plate 5, Well 6G.]. |
Miniprep,
38 ng/uL (NanoDrop, dodgy!), 01/07/14, TO. |
55 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map. |
Inverting regulatory region controlled by LacI (BBa_C0010, BBa_C0012, etc.) The PLlac 0-1 promoter is a hybrid regulatory region consisting of the promoter P(L) of phage lambda with the cI binding sites replaced with lacO1. |
10 | BBa_K314103 | Lac induced expression cassette | Spring 2014 BioBrick Distribution.
Plate 1, Well 4D. [Check! DT?]. |
Miniprep,
334 ng/uL, 01/07/14, TO. |
1638 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map. |
Lactose (IPTG) inducible protein expression insert includes f1 origin (K314110), a Lac I generator (K314111), a lactose inducible promoter (R0011), and the Elowitz standard RBS (B0034). |
11 | BBa_K206000 | pBAD Strong Promoter | Spring 2014 BioBrick Distribution.
Plate 3, Well 14A. [Check! DT?]. |
Miniprep,
144 ng/uL, 01/07/14, TO. |
130 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map |
pBAD is an E. coli promoter that is induced by L-arabinose. In the absence of arabinose, the repressor protein AraC (BBa_I13458) binds to the AraI1 operator site of pBAD and the upstream operator site AraO2, blocking transcription; in its presence, transcription is permitted. |
12 | BBa_B0034 | RBS | Spring 2014 BioBrick Distribution.
Plate 4, Well 1N. [Check! DT?]. |
Miniprep,
156.5 ng/uL, 01/07/14, TO. |
12 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1A2, i.e. ampicillin resistant (ampR).
Plasmid / Vector Map |
RBS based on Elowitz (1999) repressilator. |
13 | BBa_K518012 | RBS + RFP + double Terminator | Spring 2014 BioBrick Distribution.
Plate 1, Well 18C. [Check! DT?]. |
(1) Miniprep,
49 ng/uL, 01/07/14, TO. (2) Miniprep, 219.2 ng/uL, 08/08/14, YKH. |
828 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map |
This Coding Device contains: RBS.3 (medium) (B0032), mRFP1 (E1010), and double terminator (B0014 = B0012+B0011). |
14 | [CHECK: BAD PART !]
BBa_B0012 (2) |
Transcription Terminator for E. coli RNA polymerase | Spring 2014 BioBrick Distribution.
Plate 2, Well 2B. [Check! DT?]. |
Miniprep,
128 ng/uL, 01/07/14, TO. |
41 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map |
TE from coliphage T7. This is a bad terminator (Experience: Fails). It is a promoter in the reverse direction. |
# | ID | Name / Function | Source | State / Concentration / Date Made | Gene Size / Sequence | Initial Plasmid / Vector | Comments |