Team:UCL/Science/Sequences
From 2014.igem.org
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<h4><a name="ispB" href="http://parts.igem.org/Part: ">[New] ispB Part-only sequence (972bp) [Link, see EG]</a></h4> | <h4><a name="ispB" href="http://parts.igem.org/Part: ">[New] ispB Part-only sequence (972bp) [Link, see EG]</a></h4> | ||
- | <p class="widthCorrect">Sequence shows the ispB gene, but we use the <a href="/Team:UCL/Science/Sequences#ispB_RC">Reverse Complement</a> to design primers to produce an antisense fragment for gene knockdown (i.e. as RNAi).<font size="2"><code>ATGAATTTAGAAAAAATCAATGAGTTAACCGCGCAAGATATGGCGGGTGT | + | <p class="widthCorrect">Sequence shows the <a href="http://www.ncbi.nlm.nih.gov/protein/16131077">ispB gene</a>, but we use the <a href="/Team:UCL/Science/Sequences#ispB_RC">Reverse Complement</a> to design primers to produce an antisense fragment for <a href="http://jb.asm.org/content/179/9/3058.short">gene knockdown</a> (i.e. as RNAi).<font size="2"><code>ATGAATTTAGAAAAAATCAATGAGTTAACCGCGCAAGATATGGCGGGTGT |
TAATGCGGCAATCCTTGAGCAGCTTAATTCCGACGTCCAACTGATCAATC | TAATGCGGCAATCCTTGAGCAGCTTAATTCCGACGTCCAACTGATCAATC | ||
AGTTAGGCTATTACATCGTCAGCGGCGGCGGTAAACGTATTCGTCCGATG | AGTTAGGCTATTACATCGTCAGCGGCGGCGGTAAACGTATTCGTCCGATG |
Revision as of 16:33, 28 September 2014
Gene and BioBrick Part Sequences
Laboratory Team
Summary
For ease of reference, the sequences for (1) our BioBrick Gene Designs, (2) Plasmid / Vector Backbones, and (3) BioBricks that we have used from that iGEM Registry Distribution, have been provided below. Clicking on the Gene/Plasmid/BioBrick headers will take you to pages describing the part in more detail and the source of the sequences.
Note: format is a little horrendous, will change to all CAPS, and at a set width (70-75 char), and add "br" for all later.
BioBrick Designs for Our Genes
[New] AzoR Part-only sequence (597/612bp) [Link, see DT]
Sequence taken from Lisbon.ATGAAACTGTTGCACATCGATTCGAGCATCCTGGGCGACAATTCCGCCTCGCGTCAGCTGAGCCGTGAAG
TGGTCGAAGCCTGGAAGGCTGCAGACCCAAGCGTTGAAGTGGTTTATCGCGACCTGGCTGCCGATGCCAT
CGCCCACTTCTCCGCTGCCACCCTGGTCGCTGCAGGCACCCCTGAAGACGTACGCGACGCGGCCCAGGCT
TTCGAAGCCAAGCTGAGCGCCGAGACGCTCGAAGAGTTCCTGGCTGCCGATGCCGTGGTGATTGGTGCGC
CCATGTACAACTTCACCGTGCCGACCCAGCTCAAAGCCTGGATTGACCGCGTAGCCGTCGCCGGCAAGAC
CTTCCGCTACACCGAAGCCGGCCCGCAAGGCCTGTGCGGCAACAAGAAAGTGGTGCTGGTTTCCACTGCG
GGTGGCCTGCACGCTGGCCAGCCGACTGGCGCCGGGCATGAAGACTTCCTGAAAGTGTTCCTGGGCTTCA
TCGGGATTACTGACCTGGAAATCGTCCGGGCCCACGGCCTGGCCTATGGCCCGGAGCAGCGCAGCCAGGC
GATCGATGCTGCACAGGCGCAGATTGCCAGCGAGCTGTTTGCGGCTGCCTGA
[New] AzoR 1B6 (heat-stable AzoR mutant) Part-only sequence (597/612bp) [Link, see DT]
Sequence given from Lisbon group directly.ATGAAACTGTTGCACATCGATTCGAGCATCCTGGGCGACAATTCCGCCTCGCGCCAGCTGAGCC
GTGAAGTGGTCGAAGCCTGGAAGGCTGCAGACCCAAGCGTGGAAGTGGTTTATCGCGACCTGGCTGCCGA
TCCCATCGCCCACTTCTCCGCTGCCACCCTGGTCGCTGCAGGCACCCCTGAAGACGTACGCGACGCGGCC
CAGGCTTTCGAAGCCAAGCTGAGCGCCGAGACGCTCGAAGAGTTCCTGGCTGCCGATGGCGTGGTGATTG
GTGCGCCCATGTACAACTTCACCGTGCCGACCCAGCTCAAAGCCTGGATTGACCGCGTAGCCGTCGCCGG
CAAGACCTTCCGCTACACCGAAGCCGGCCCGCAAGGCCTGAGCGGCGACAAGAAAGTGGTGCTGGTTTCC
ACTGCGGGTGGCCAGCATGCTGGCCAGCCGACTGGCGCCGGGCATGAAGACTTCCTGAAAGCGTTCCTGG
GCTTCATCGGGATTACTGACCTGGAAATCGTCCGGGCCCACGGCCTGGACTATGGCCCGGAGCAGCGCAG
CCAGGCGATAGATGCTGCACGGGCGCAGATTGCCAGCGAGCTGTTTGCGGCTGCCTGA
[Proposed] CotA Part-only sequence (1733/1539bp) [Link, see DT]
Sequence given from Lisbon group directly.atgacacttgaaaaatttgtggatgctctcccaatcccagatacactaaa
gccagtacagcaatcaaaagaaaaaacatactacgaagtcaccatggagg
aatgcactcatcagctccatcgcgatctccctccaacccgcctgtggggc
tacaacggcttatttccgggaccgaccattgaggttaaaagaaatgaaaa
cgtatatgtaaaatggatgaataaccttccttccacgcatttccttccga
ttgatcacaccattcatcacagtgacagccagcatgaagagcccgaggta
aagactgttgttcatttacacggcggcgtcacgccagatgatagtgacgg
gtatccggaggcttggttttccaaagactttgaacaaacaggaccttatt
tcaaaagagaggtttatcattatccaaaccagcagcgcggggctatattg
tggtatcacgatcacgccatggcgctcaccaggctaaatgtctatgccgg
acttgtcggtgcatatatcattcatgacccaaaggaaaaacgcttaaaac
tgccttcagacgaatacgatgtgccgcttcttatcacagaccgcacgatc
aatgaggatggttctttgttttatccgagcgcaccggaaaacccttctcc
gtcactgcctaatccttcaatcgttccggctttttgcggagaaaccatac
tcgtcaacgggaaggtatggccatacttggaagtcgagccaaggaaatac
cgattccgtgtcatcaacgcctccaatacaagaacctataacctgtcact
cgataatggcggagattttattcagattggttcagatggagggctcctgc
cgcgatctgttaaactgaattctttcagccttgcgcctgctgaacgttac
gatatcatcattgacttcacagcatatgaaggagaatcgatcattttggc
aaacagcgcgggctgcggcggtgacgtcaatcctgaaacagatgcgaata
tcatgcaattcagagtcacaaaaccattggcacaaaaagacgaaagcaga
aagccgaagtacctcgcctcatacccttcggtacagcatgaaagaataca
aaacatcagaacgttaaaactggcaggcacccaggacgaatacggcagac
ccgtccttctgcttaataacaaacgctggcacgatcccgtcacagaaaca
ccaaaagtcggcacaactgaaatatggtccattatcaacccgacacgcgg
aacacatccgatccacctgcatctagtctccttccgtgtattagaccggc
ggccgtttgatatcgcccgttatcaagaaagcggggaattgtcctatacc
ggtccggctgtcccgccgccgccaagtgaaaagggctggaaagacaccat
tcaagcgcatgcaggtgaagtcctgagaatcgcggcgacattcggtccgt
acagcggacgatacgtatggcattgccatattctagagcatgaagactat
gacatgatgagaccgatggatataactgatccccataaataa
[New] BsDyP Part-only sequence (1251bp) [Link, see DT]
Sequence given from Lisbon group directly.atgagcgatgaacagaaaaagccagaacaaattcacagacgggacattttaaaatgggga
gcgatggcgggggcagccgttgcgatcggtgccagcggtctcggcggtctcgctccgctt
gttcagactgcggctaagccatcgaaaaaggatgaaaaagaggaggagcagattgttccg
ttttacggaaagcatcaggccggaatcacaactgcccatcagacgtatgtctattttgct
gcactggatgtaacagcaaaagacaaaagcgacatcattacgttatttagaaactggaca
agtctcacacagatgctgacgtctggcaagaaaatgtcagcggagcagagaaatcagtat
ctgccgccgcaggatacaggtgagtctgctgatttatccccttccaacttaacggtcaca
ttcggattcgggcctggcttttttgaaaaagacggaaaggaccgcttcggactgaaaagc
aaaaaaccgaagcacctagccgctcttccagcgatgcccaatgacaacctggatgaaaag
cagggaggcggggacatctgcattcaagtgtgtgcagacgacgagcaagtggcgtttcac
gcgctgcgtaacctgctaaatcaagcggtcggcacttgtgaggtccgttttgtgaacaaa
ggctttttaagcggtggaaaaaatggtgaaacaccgcgcaacctcttcgggtttaaagat
ggaacaggcaaccagagcacgaaggatgacacgttgatgaactcgatcgtgtggattcag
tctggtgagcctgactggatgacgggcggcacctatatggcttttcggaaaatcaaaatg
ttccttgaggtatgggaccgctcttccctcaaggaccaagaggataccttcggccgcaga
aaaagctcgggggcgccttttgggcagaaaaaggaaacagatcccgtgaagctgaatcaa
attccgtctaattcacacgtcagtctagcgaaatctactgggaaacaaattttgcgaaga
gctttctcttacacagaaggacttgatccgaaaaccggctatatggatgcaggtctcctg
tttatcagttttcaaaaaaatcccgacaatcagtttatcccgatgctgaaggctctttca
gcaaaggatgcgttaaacgaatatacacaaacaatcggttctgctttatacgcatgccca
ggcggctgcaaaaaaggagaatatattgcccagcgtttgctggaatcataa
[Proposed] PpDyP Part-only sequence (861/864bp) [Link, see DT]
Sequence taken from Lisbon.ATGCCGTTCCAGCAAGGTCTGCTTGCCACCCCGGTGCCGGCCCACGCCCGTCACCTGTTCTTCACCCTGC
AGTCGCCCGAGGCGTTGCCTGCCGCGCTGGATGCCTTGCTGCCGCAGGTCGATGGCAAACAGTTGCTGCT
GGGCGTAGGCGCCCCCTTGGCCAAGGCCCTGGGCCGGGAAATACCAGGCCTGCGCCCGTTCCCGCTACTG
GATGCCGCGGTTGAGAACCCCAGCACCCAACACGCCCTGTGGCTGTGGCTGCGTGGCGACGAACGTGGCG
ACCTGCTGCTGCGCACCCAGGCCCTGGAGCAGGCGCTGGCACCCGCCCTGAGCCTGGCCGACAGCGTTGA
TGGCTTCCTGCACCGGGGCGGCCATGACCTTACCGGTTATGAAGACGGCACCGAAAACCCGACAGACGAA
GAGGCGGTGCAAGCGGCCATTGCCGCAGATGGCTCCAGCTTTGCCGCGTTCCAGCTGTGGAAGCACGACC
TGCAATACTTCAAGTCGCTGCCCCAGGCAGACCAGGACAACATCATCGGCCGTCGCTTGAGCGATAACGA
AGAACTCGACGACGCCCCCGCGTCCGCGCACGTCAAGCGCACCGCCCAGGAAAGCTTTGAACCCGAGGCG
TTCATGGTCCGTCGCTCGGTATCCTGGGCCGACCAACGCGGCGCCGGCCTGGCTTTCGTCGCCCTGGGCA
AGAGTTTCGAGGCATTCGAGGTGCAGCTGCGGCGCATGAGTGGCCTGGAAGACGGCATCATCGACGGGCT
GTACCGCTTCAGCCGCCCGCTGACGGGGGGCTACTACTGGTGCCCGCCAATGAGCGAGACGGGTGTCGAT
CTAAGCCCCTTGCTGCGGGCCTGA
[Improvement] LiP Part-only sequence (1116bp) [Link, see DT]
Sequence taken from the initial page; not currently showing our improvements.atggcttttaaacaattattcgccgctatttccttggctttgtctttgtctgctgctaatgctgctgctgttattgaaaaaagagctacttgttccaacg
gtaagactgttggtgatgcttgttcttgtgcttggtttgatgttttggacgacatccaacaaaacttgtttcatggtggtcaatgtggtgctgaagctca
tgaatctatcagattggttttccatgactccattgctatttctccagctatggaagctcaaggtaaatttggtggaggtggtgctgatggttccattatg
attttcgatgatatcgaaaccgccttccatccaaatattggtttggacgaaatcgtcaagttgcaaaagccatttgttcaaaagcacggtgttactccag
gtgattttattgcttttgctggtgctgttgctttgtctaattgtccaggtgctccacaaatgaatttctttactggtagagcaccagctactcaaccagc
tccagatggtttggttccagaaccatttcataccgttgaccaaatcatcaacagagttaatgacgccggtgaatttgacgaattggaattggtttggatg
ttgtctgctcattctgttgctgctgttaatgatgttgatccaactgttcaaggtttgccatttgattctaccccaggtattttcgattcccaattcttcg
ttgaaacccaattgagaggtactgcttttccaggttctggtggtaatcaaggtgaagttgaatctccattgccaggtgaaattagaatccaatccgatca
taccattgccagagattcaagaactgcttgtgaatggcaatccttcgttaacaatcaatccaagttggttgacgacttccaattcattttcttggctttg
actcaattgggtcaagatccaaatgctatgactgattgctccgatgttattccacaatctaaacctatcccaggtaacttgccattttcattttttccag
ctggtaagaccatcaaggatgttgaacaagcttgtgctgaaactccatttccaactttgactactttgccaggtccagaaacttctgttcaaagaatacc
accaccaccaggtgct
[Improvement] Laccase Part-only sequence (Xbp) [Link, see DT]
Sequence taken from the initial page; not currently showing our improvements.ttgacagctagctcagtcctaggtataatgctagctactagagaaagaggagaaatactagatgcaacgtcgtgatttcttaaaatattccgtcgcgctg
ggtgtggcttcggctttgccgctgtggagccgcgcagtatttgcggcagaacgcccaacgttaccgatccctgatttgctcacgaccgatgcccgtaatc
gcattcagttaactattggcgcaggccagtccacctttggcgggaaaactgcaactacctggggctataacggcaatctgctggggccggcggtgaaatt
acagcgcggcaaagcggtaacggttgatatctacaaccaactgacggaagagacaacgttgcactggcacgggctggaagtaccgggtgaagtcgacggc
ggcccgcagggaattattccgccaggtggcaagcgctcggtgacgttgaacgttgatcaacctgccgctacctgctggttccatccgcatcagcacggca
aaaccgggcgacaggtggcgatggggctggctgggctggtggtgattgaagatgacgagatcctgaaattaatgctgccaaaacagtggggtatcgatga
tgttccggtgatcgttcaggataagaaatttagcgccgacgggcagattgattatcaactggatgtgatgaccgccgccgtgggctggtttggcgatacg
ttgctgaccaacggtgcaatctacccgcaacacgctgccccgcgtggttggctgcgcctgcgtttgctcaatggctgtaatgcccgttcgctcaatttcg
ccaccagcgacaatcgcccgctgtatgtgattgccagcgacggtggtctgctacctgaaccagtgaaggtgagcgaactgccggtgctgatgggcgagcg
ttttgaagtgctggtggaggttaacgataacaaaccctttgacctggtgacgctgccggtcagccagatggggatggcgattgcgccgtttgataagcct
catccggtaatgcggattcagccgattgctattagtgcctccggtgctttgccagacacattaagtagcctgcctgcgttaccttcgctggaagggctga
cggtacgcaagctgcaactctctatggacccgatgctcgatatgatggggatgcagatgctaatggagaaatatggcgatcaggcgatggccgggatgga
tcacagccagatgatgggccatatggggcacggcaatatgaatcatatgaaccacggcgggaagttcgatttccaccatgccaacaaaatcaacggtcag
gcgtttgatatgaacaagccgatgtttgcggcggcgaaagggcaatacgaacgttgggttatctctggcgtgggcgacatgatgctgcatccgttccata
tccacggcacgcagttccgtatcttgtcagaaaatggcaaaccgccagcggctcatcgcgcgggctggaaagataccgttaaggtagaaggtaatgtcag
cgaagtgctggtgaagtttaatcacgatgcaccgaaagaacatgcttatatggcgcactgccatctgctggagcatgaagatacggggatgatgttaggg
tttacggtataa
[New] ispB Part-only sequence (972bp) [Link, see EG]
Sequence shows the ispB gene, but we use the Reverse Complement to design primers to produce an antisense fragment for gene knockdown (i.e. as RNAi).ATGAATTTAGAAAAAATCAATGAGTTAACCGCGCAAGATATGGCGGGTGT
TAATGCGGCAATCCTTGAGCAGCTTAATTCCGACGTCCAACTGATCAATC
AGTTAGGCTATTACATCGTCAGCGGCGGCGGTAAACGTATTCGTCCGATG
ATTGCTGTACTGGCTGCACGAGCTGTTGGCTATGAGGGAAATGCGCATGT
CACCATTGCTGCCCTGATCGAGTTTATCCACACGGCGACTCTGCTACACG
ACGACGTTGTGGATGAATCAGATATGCGCAGGGGTAAAGCTACCGCCAAC
GCCGCATTTGGCAATGCCGCCAGCGTGCTGGTAGGCGATTTTATTTATAC
CCGCGCTTTCCAGATGATGACCAGCCTCGGTTCGCTCAAAGTGCTGGAAG
TCATGTCAGAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAACTG
ATGAACGTTAACGATCCGGACATCACTGAAGAAAACTACATGCGCGTTAT
CTATAGCAAAACCGCGCGTCTGTTTGAGGCTGCCGCGCAGTGTTCCGGGA
TTCTGGCTGGCTGTACGCCGGAGGAGGAGAAAGGCCTGCAGGATTATGGG
CGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAA
TGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAG
GTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCAGAA
CAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCT
TCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGA
CGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAG
GTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACAT
CGCTGTTCAACGCGATCGTTAA
[New] ispB Reverse Complement Part-only sequence (972bp) [Link, see DT]
TTAACGATCGCGTTGAACAGCGATGTGCGCGAGGCCGATGAGTGCTTCTC
GCCAAGGGGTGTCCGGGAGCACCTGTAACGCTGCGATGGCTTTGTCTGCT
TCTTCCTCGGCACGCTGACGCGTCCATTCAAGAGATCCACAAGCGTTCAT
TGCTTCCAGAACCGGTTCCAGAAGATGGCGACCGTTACCCTGTTCGATGG
CGGTACGGATCATCTGTGCCTGTTCTGGTGTGCCATGATGCATCGCATGC
AGCAGCGGCAGCGTCGGTTTACCTTCGTTCAGATCGTCGCCGACATTTTT
ACCTAACTGTTCGCCATCGGCATTGTAATCGAGTAAATCGTCGATCAACT
GGAAAGCAGTGCCGAGATAGCGCCCATAATCCTGCAGGCCTTTCTCCTCC
TCCGGCGTACAGCCAGCCAGAATCCCGGAACACTGCGCGGCAGCCTCAAA
CAGACGCGCGGTTTTGCTATAGATAACGCGCATGTAGTTTTCTTCAGTGA
TGTCCGGATCGTTAACGTTCATCAGTTGCAGAACTTCACCTTCTGCGATG
ACGTTTACGGCTTCTGACATGACTTCCAGCACTTTGAGCGAACCGAGGCT
GGTCATCATCTGGAAAGCGCGGGTATAAATAAAATCGCCTACCAGCACGC
TGGCGGCATTGCCAAATGCGGCGTTGGCGGTAGCTTTACCCCTGCGCATA
TCTGATTCATCCACAACGTCGTCGTGTAGCAGAGTCGCCGTGTGGATAAA
CTCGATCAGGGCAGCAATGGTGACATGCGCATTTCCCTCATAGCCAACAG
CTCGTGCAGCCAGTACAGCAATCATCGGACGAATACGTTTACCGCCGCCG
CTGACGATGTAATAGCCTAACTGATTGATCAGTTGGACGTCGGAATTAAG
CTGCTCAAGGATTGCCGCATTAACACCCGCCATATCTTGCGCGGTTAACT
CATTGATTTTTTCTAAATTCAT
Plasmid Backbone / Vectors
pET-21a (+) sequence (Xbp) [Link, see DT]
atccggatatagttcctcctttcagcaaaaaacccctcaagacccgtttagaggccccaaggggttatgctagttattgc
tcagcggtggcagcagccaactcagcttcctttcgggctttgttagcagccggatctcagtggtggtggtggtggtgctc
gagtgcggccgcaagcttgtcgacggagctcgaattcggatccgcgacccatttgctgtccaccagtcatgctagccata
tgtatatctccttcttaaagttaaacaaaattatttctagaggggaattgttatccgctcacaattcccctatagtgagt
cgtattaatttcgcgggatcgagatctcgatcctctacgccggacgcatcgtggccggcatcaccggcgccacaggtgcg
gttgctggcgcctatatcgccgacatcaccgatggggaagatcgggctcgccacttcgggctcatgagcgcttgtttcgg
cgtgggtatggtggcaggccccgtggccgggggactgttgggcgccatctccttgcatgcaccattccttgcggcggcgg
tgctcaacggcctcaacctactactgggctgcttcctaatgcaggagtcgcataagggagagcgtcgagatcccggacac
catcgaatggcgcaaaacctttcgcggtatggcatgatagcgcccggaagagagtcaattcagggtggtgaatgtgaaac
cagtaacgttatacgatgtcgcagagtatgccggtgtctcttatcagaccgtttcccgcgtggtgaaccaggccagccac
gtttctgcgaaaacgcgggaaaaagtggaagcggcgatggcggagctgaattacattcccaaccgcgtggcacaacaact
ggcgggcaaacagtcgttgctgattggcgttgccacctccagtctggccctgcacgcgccgtcgcaaattgtcgcggcga
ttaaatctcgcgccgatcaactgggtgccagcgtggtggtgtcgatggtagaacgaagcggcgtcgaagcctgtaaagcg
gcggtgcacaatcttctcgcgcaacgcgtcagtgggctgatcattaactatccgctggatgaccaggatgccattgctgt
ggaagctgcctgcactaatgttccggcgttatttcttgatgtctctgaccagacacccatcaacagtattattttctccc
atgaagacggtacgcgactgggcgtggagcatctggtcgcattgggtcaccagcaaatcgcgctgttagcgggcccatta
agttctgtctcggcgcgtctgcgtctggctggctggcataaatatctcactcgcaatcaaattcagccgatagcggaacg
ggaaggcgactggagtgccatgtccggttttcaacaaaccatgcaaatgctgaatgagggcatcgttcccactgcgatgc
tggttgccaacgatcagatggcgctgggcgcaatgcgcgccattaccgagtccgggctgcgcgttggtgcggatatctcg
gtagtgggatacgacgataccgaagacagctcatgttatatcccgccgttaaccaccatcaaacaggattttcgcctgct
ggggcaaaccagcgtggaccgcttgctgcaactctctcagggccaggcggtgaagggcaatcagctgttgcccgtctcac
tggtgaaaagaaaaaccaccctggcgcccaatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctg
gcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtaagttagctcactcattaggcaccgg
gatctcgaccgatgcccttgagagccttcaacccagtcagctccttccggtgggcgcggggcatgactatcgtcgccgca
cttatgactgtcttctttatcatgcaactcgtaggacaggtgccggcagcgctctgggtcattttcggcgaggaccgctt
tcgctggagcgcgacgatgatcggcctgtcgcttgcggtattcggaatcttgcacgccctcgctcaagccttcgtcactg
gtcccgccaccaaacgtttcggcgagaagcaggccattatcgccggcatggcggccccacgggtgcgcatgatcgtgctc
ctgtcgttgaggacccggctaggctggcggggttgccttactggttagcagaatgaatcaccgatacgcgagcgaacgtg
aagcgactgctgctgcaaaacgtctgcgacctgagcaacaacatgaatggtcttcggtttccgtgtttcgtaaagtctgg
aaacgcggaagtcagcgccctgcaccattatgttccggatctgcatcgcaggatgctgctggctaccctgtggaacacct
acatctgtattaacgaagcgctggcattgaccctgagtgatttttctctggtcccgccgcatccataccgccagttgttt
accctcacaacgttccagtaaccgggcatgttcatcatcagtaacccgtatcgtgagcatcctctctcgtttcatcggta
tcattacccccatgaacagaaatcccccttacacggaggcatcagtgaccaaacaggaaaaaaccgcccttaacatggcc
cgctttatcagaagccagacattaacgcttctggagaaactcaacgagctggacgcggatgaacaggcagacatctgtga
atcgcttcacgaccacgctgatgagctttaccgcagctgcctcgcgcgtttcggtgatgacggtgaaaacctctgacaca
tgcagctcccggagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccgtcagggcgcgtcagcgggt
gttggcgggtgtcggggcgcagccatgacccagtcacgtagcgatagcggagtgtatactggcttaactatgcggcatca
gagcagattgtactgagagtgcaccatatatgcggtgtgaaataccgcacagatgcgtaaggagaaaataccgcatcagg
cgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggc
ggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaacc
gtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcag
aggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgac
cctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatc
tcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatcc
ggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcag
agcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggta
tctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagc
ggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggg
gtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatcc
ttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatc
agtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgat
acgggagggcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaa
taaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgc
cgggaagctagagtaagtagttcgccagttaatagtttgcgcaacgttgttgccattgctgcaggcatcgtggtgtcacg
ctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaa
aagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagca
ctgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgaga
atagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaag
tgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaaccc
actcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgc
cgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatc
agggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacatttccc
cgaaaagtgccacctgaaattgtaaacgttaatattttgttaaaattcgcgttaaatttttgttaaatcagctcattttt
taaccaataggccgaaatcggcaaaatcccttataaatcaaaagaatagaccgagatagggttgagtgttgttccagttt
ggaacaagagtccactattaaagaacgtggactccaacgtcaaagggcgaaaaaccgtctatcagggcgatggcccacta
cgtgaaccatcaccctaatcaagttttttggggtcgaggtgccgtaaagcactaaatcggaaccctaaagggagcccccg
atttagagcttgacggggaaagccggcgaacgtggcgagaaaggaagggaagaaagcgaaaggagcgggcgctagggcgc
tggcaagtgtagcggtcacgctgcgcgtaaccaccacacccgccgcgcttaatgcgccgctacagggcgcgtcccattcg
cca
pSB1C3 Part-only sequence (2070bp)
tactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggct
tcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggata
acgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacga
gcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcct
gttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgt
aggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaag
acacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactac
ggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccg
ctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctca
gtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagctcgaggcttggattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagat
ggagttctgaggtcattactggatctatcaacaggagtccaagcgagctcgatatcaaattacgccccgccctgccactcatcgcagtactgttgtaatt
cattaagcattctgccgacatggaagccatcacaaacggcatgatgaacctgaatcgccagcggcatcagcaccttgtcgccttgcgtataatatttgcc
catggtgaaaacgggggcgaagaagttgtccatattggccacgtttaaatcaaaactggtgaaactcacccagggattggctgagacgaaaaacatattc
tcaataaaccctttagggaaataggccaggttttcaccgtaacacgccacatcttgcgaatatatgtgtagaaactgccggaaatcgtcgtggtattcac
tccagagcgatgaaaacgtttcagtttgctcatggaaaacggtgtaacaagggtgaacactatcccatatcaccagctcaccgtctttcattgccatacg
aaattccggatgagcattcatcaggcgggcaagaatgtgaataaaggccggataaaacttgtgcttatttttctttacggtctttaaaaaggccgtaata
tccagctgaacggtctggttataggtacattgagcaactgactgaaatgcctcaaaatgttctttacgatgccattgggatatatcaacggtggtatatc
cagtgatttttttctccattttagcttccttagctcctgaaaatctcgataactcaaaaaatacgcccggtagtgatcttatttcattatggtgaaagtt
ggaacctcttacgtgcccgatcaactcgagtgccacctgacgtctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggca
gaatttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagag
pSB1A3 Part-only sequence (2155bp)
tactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggct
tcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggata
acgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacga
gcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcct
gttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgt
aggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaag
acacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactac
ggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccg
ctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctca
gtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcct
gactccccgtcgtgtagataactacgatacgggagggcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagattt
atcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctaga
gtaagtagttcgccagttaatagtttgcgcaacgttgttgccattgctacaggcatcgtggtgtcacgctcgtcgtttggtatggcttcattcagctccg
gttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgc
agtgttatcactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtca
ttctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaagtgctcatcattg
gaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatataacccactcgtgcacccaactgatcttcagcatcttt
tactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttc
ctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgca
catttccccgaaaagtgccacctgacgtctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggcagaatttcagataaaa
aaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagag
pSB1K3 Part-only sequence (2204bp)
tactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggct
tcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggata
acgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacga
gcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcct
gttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgt
aggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaag
acacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactac
ggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccg
ctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctca
gtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagctcgagtcccgtcaagtcagcgtaatgctctgccagtgttacaaccaattaaccaattctgattagaa
aaactcatcgagcatcaaatgaaactgcaatttattcatatcaggattatcaataccatatttttgaaaaagccgtttctgtaatgaaggagaaaactca
ccgaggcagttccataggatggcaagatcctggtatcggtctgcgattccgactcgtccaacatcaatacaacctattaatttcccctcgtcaaaaataa
ggttatcaagtgagaaatcaccatgagtgacgactgaatccggtgagaatggcaaaagcttatgcatttctttccagacttgttcaacaggccagccatt
acgctcgtcatcaaaatcactcgcatcaaccaaaccgttattcattcgtgattgcgcctgagcgagacgaaatacgcgatcgctgttaaaaggacaatta
caaacaggaatcgaatgcaaccggcgcaggaacactgccagcgcatcaacaatattttcacctgaatcaggatattcttctaatacctggaatgctgttt
tcccggggatcgcagtggtgagtaaccatgcatcatcaggagtacggataaaatgcttgatggtcggaagaggcataaattccgtcagccagtttagtct
gaccatctcatctgtaacatcattggcaacgctacctttgccatgtttcagaaacaactctggcgcatcgggcttcccatacaatcgatagattgtcgca
cctgattgcccgacattatcgcgagcccatttatacccatataaatcagcatccatgttggaatttaatcgcggcctggagcaagacgtttcccgttgaa
tatggctcataacaccccttgtattactgtttatgtaagcagacagttttattgttcatgatgatatatttttatcttgtgcaatgtaacatcagagatt
ttgagacacaacgtggctttgttgaataaatcgaacttttgctgagttgaaggatcagctcgagtgccacctgacgtctaagaaaccattattatcatga
cattaacctataaaaataggcgtatcacgaggcagaatttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttct
agag
BioBricks from iGEM Parts Registry Distributions
[Test use] J04450 Part-only sequence (1069bp)
caatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaat
taatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacaca
tactagagaaagaggagaaatactagatggcttcctccgaagacgttatcaaagagttcatgcgtttcaaagttcgtatggaaggttccgttaacggtca
cgagttcgaaatcgaaggtgaaggtgaaggtcgtccgtacgaaggtacccagaccgctaaactgaaagttaccaaaggtggtccgctgccgttcgcttgg
gacatcctgtccccgcagttccagtacggttccaaagcttacgttaaacacccggctgacatcccggactacctgaaactgtccttcccggaaggtttca
aatgggaacgtgttatgaacttcgaagacggtggtgttgttaccgttacccaggactcctccctgcaagacggtgagttcatctacaaagttaaactgcg
tggtaccaacttcccgtccgacggtccggttatgcagaaaaaaaccatgggttgggaagcttccaccgaacgtatgtacccggaagacggtgctctgaaa
ggtgaaatcaaaatgcgtctgaaactgaaagacggtggtcactacgacgctgaagttaaaaccacctacatggctaaaaaaccggttcagctgccgggtg
cttacaaaaccgacatcaaactggacatcacctcccacaacgaagactacaccatcgttgaacagtacgaacgtgctgaaggtcgtcactccaccggtgc
ttaataacgctgatagtgctagtgtagatcgctactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgtt
gtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
[Used] K314103 Part-only sequence (1638bp)
acgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgcttt
cttcccttcctttctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgac
cccaaaaaacttgattagggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttaatagtg
gactcttgttccaaactggaacaacactcaaccctatctcggtctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatga
gctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgtttacaatttactagaggtggtgaatgtgaaaccagtaacgttatacgatgtcg
cagagtatgccggtgtctcttatcagaccgtttcccgcgtggtgaaccaggccagccacgtttctgcgaaaacgcgggaaaaagtggaagcggcgatggc
ggagctgaattacattcccaaccgcgtggcacaacaactggcgggcaaacagtcgttgctgattggcgttgccacctccagtctggccctgcacgcgccg
tcgcaaattgtcgcggcgattaaatctcgcgccgatcaactgggtgccagcgtggtggtgtcgatggtagaacgaagcggcgtcgaagcctgtaaagcgg
cggtgcacaatcttctcgcgcaacgcgtcagtgggctgatcattaactatccgctggatgaccaggatgccattgctgtggaagctgcctgcactaatgt
tccggcgttatttcttgatgtctctgaccagacacccatcaacagtattattttctcccatgaagacggtacgcgactgggcgtggagcatctggtcgca
ttgggtcaccagcaaatcgcgctgttagcgggcccattaagttctgtctcggcgcgtctgcgtctggctggctggcataaatatctcactcgcaatcaaa
ttcagccgatagcggaacgggaaggcgactggagtgccatgtccggttttcaacaaaccatgcaaatgctgaatgagggcatcgttcccactgcgatgct
ggttgccaacgatcagatggcgctgggcgcaatgcgcgccattaccgagtccgggctgcgcgttggtgcggacatctcggtagtgggatacgacgatacc
gaagacagctcatgttatatcccgccgttaaccaccatcaaacaggattttcgcctgctggggcaaaccagcgtggaccgcttgctgcaactctctcagg
gccaggcggtgaagggcaatcagctgttgcccgtctcactggtgaaaagaaaaaccaccctggcgcccaatacgcaaaccgcctctccccgcgcgttggc
cgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgatactagagaattgtgagcggataacaattgacattgtgagcggat
aacaagatactgagcacatactagagaaagaggagaaa
[Test use] R0010 Part-only sequence (200bp)
caatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaat
taatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacaca
[Not used] R0011 Part-only sequence (55bp)
aattgtgagcggataacaattgacattgtgagcggataacaagatactgagcaca
[Not used] K206000 Part-only sequence (130bp)
acattgattatttgcacggcgtcacactttgctatgccatagcaagatagtccataagattagcggatcctacctgacgctttttatcgcaactctctac
tgtttctccataccgtttttttgggctagc
[Test use] B0034 Part-only sequence (12bp)
aaagaggagaaa
[Test use] K518012 Part-only sequence (828bp)
tcacacaggaaagtactagatggcttcctccgaagacgttatcaaagagttcatgcgtttcaaagttcgtatggaaggttccgttaacggtcacgagttc
gaaatcgaaggtgaaggtgaaggtcgtccgtacgaaggtacccagaccgctaaactgaaagttaccaaaggtggtccgctgccgttcgcttgggacatcc
tgtccccgcagttccagtacggttccaaagcttacgttaaacacccggctgacatcccggactacctgaaactgtccttcccggaaggtttcaaatggga
acgtgttatgaacttcgaagacggtggtgttgttaccgttacccaggactcctccctgcaagacggtgagttcatctacaaagttaaactgcgtggtacc
aacttcccgtccgacggtccggttatgcagaaaaaaaccatgggttgggaagcttccaccgaacgtatgtacccggaagacggtgctctgaaaggtgaaa
tcaaaatgcgtctgaaactgaaagacggtggtcactacgacgctgaagttaaaaccacctacatggctaaaaaaccggttcagctgccgggtgcttacaa
aaccgacatcaaactggacatcacctcccacaacgaagactacaccatcgttgaacagtacgaacgtgctgaaggtcgtcactccaccggtgcttaataa
cgctgatagtgctagtgtagatcgctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagagagaatataaaaagcca
gattattaatccggcttttttattattt
[Not used] B0012 Part-only sequence (41bp)
tcacactggctcaccttcgggtgggcctttctgcgtttata
Full table
No. | ID | Name / Function | Source | State / Concentration / Date Made | Gene Size / Sequence | Initial Plasmid / Vector | Comments |
---|---|---|---|---|---|---|---|
1 | pAzoR / BBa_K1336000 | FMN-dependent NADH-azoreductase 1 | Pseudomonas putida | Miniprep,
48 ng/uL, 15/07/17, TO. |
597 bp [Check! Not 612 bp?],
Genomic Sequence |
Expression vector pET-21a (+) (ampicillin resistant (ampR)), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
2 | p1B6 (AzoR 1B6) / BBa_K1336001 | Mutant: Heat-stable; FMN-dependent NADH-azoreductase 1 | Pseudomonas putida | Miniprep,
68 ng/uL, 15/07/14, TO. |
597 bp [Check! Not 612 bp?],
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
3 | pCotA / BBa_K1336002 | Spore Coat Protein Laccase | Bacillus subtilis | Miniprep,
103 ng/uL, 15/07/14, TO. |
1733 bp [Check! Not 1539 bp?]
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NheI and BamHI. | Plasmid provided by Lisbon; with Paper. |
4 | LiP / BBa_K1336003 | Lignin Peroxidase | Phanerochaete chrysosporium (White-Rot Fungi) | [Being synthesised by Gene Oracle],
X ng/uL, dd/mm/yy, Gene Oracle. |
X bp,
Genomic Sequence |
[Cloned directly into expression vector, pSB1C3, between EcoRI and PstI.] | Synthesised (for free) by Gene Oracle. Sequence from Paper. |
5 | pBsDyP / BBa_K1336004 | Dye Decolourising Peroxidase BSU38260 | Bacillus subtilis | Miniprep,
51 ng/uL, 15/07/14, TO. |
1251 bp,
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
6 | pPpDyP / BBa_K1336005 | Dye Decolourising Peroxidase PP_3248 | Pseudomonas putida | Miniprep,
55 ng/uL, 15/07/14, TO. |
861 bp [Check! Not 864 bp?],
Genomic Sequence[Add sequence! Sent from Lisbon, see DT] |
Expression vector pET-21a (+) (ampR), initially cloned between NdeI and BamHI. | Plasmid provided by Lisbon; with Paper. |
7 | BBa_J04450 | RFP Coding Device | Spring 2014 BioBrick Distribution.
Plate 4, Well 4B. [Check! DT?]. |
(1) Miniprep,
333 ng/uL, 01/07/14, TO. (2) Miniprep, 38 ng/uL (NanoDrop, dodgy!) 01/07/14, TO. |
1069 bp,
Genomic Sequence[Add sequence! Made from combined BioBricks?] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR). | LacI-, and CAP-, sensitive; can fail if system contains LacI or CAP protein!
RFP Coding Device contains: LacI (R0010), strong RBS (B0034), mRFP1 (E1010), and double terminator (B0015 = B0010+B0012). |
8 | BBa_R0010 | Promoter (LacI regulated) | Spring 2014 BioBrick Distribution.
Plate 3, Well 4G. [Check! DT?]. |
Miniprep,
329.1 ng/uL, 01/07/14, TO. |
200 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map. |
This part is an inverting regulator sensitive to LacI and CAP. In the absence of LacI and CAP proteins, this part promotes transcription; in their presence, the part inhibits transcription. LacI can be inhibited by IPTG. |
9 | BBa_R0011 | Promoter (LacI regulated, lambda pL hybrid) | Spring 2014 BioBrick Distribution.
Plate 2, Well 6D (Inconsistent sequencing!). [Check! DT? / Maybe use Spring 2013 Distribution, Plate 5, Well 6G.]. |
Miniprep,
38 ng/uL (NanoDrop, dodgy!), 01/07/14, TO. |
55 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map. |
Inverting regulatory region controlled by LacI (BBa_C0010, BBa_C0012, etc.) The PLlac 0-1 promoter is a hybrid regulatory region consisting of the promoter P(L) of phage lambda with the cI binding sites replaced with lacO1. |
10 | BBa_K314103 | Lac induced expression cassette | Spring 2014 BioBrick Distribution.
Plate 1, Well 4D. [Check! DT?]. |
Miniprep,
334 ng/uL, 01/07/14, TO. |
1638 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map. |
Lactose (IPTG) inducible protein expression insert includes f1 origin (K314110), a Lac I generator (K314111), a lactose inducible promoter (R0011), and the Elowitz standard RBS (B0034). |
11 | BBa_K206000 | pBAD Strong Promoter | Spring 2014 BioBrick Distribution.
Plate 3, Well 14A. [Check! DT?]. |
Miniprep,
144 ng/uL, 01/07/14, TO. |
130 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map |
pBAD is an E. coli promoter that is induced by L-arabinose. In the absence of arabinose, the repressor protein AraC (BBa_I13458) binds to the AraI1 operator site of pBAD and the upstream operator site AraO2, blocking transcription; in its presence, transcription is permitted. |
12 | BBa_B0034 | RBS | Spring 2014 BioBrick Distribution.
Plate 4, Well 1N. [Check! DT?]. |
Miniprep,
156.5 ng/uL, 01/07/14, TO. |
12 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1A2, i.e. ampicillin resistant (ampR).
Plasmid / Vector Map |
RBS based on Elowitz (1999) repressilator. |
13 | BBa_K518012 | RBS + RFP + double Terminator | Spring 2014 BioBrick Distribution.
Plate 1, Well 18C. [Check! DT?]. |
(1) Miniprep,
49 ng/uL, 01/07/14, TO. (2) Miniprep, 219.2 ng/uL, 08/08/14, YKH. |
828 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map |
This Coding Device contains: RBS.3 (medium) (B0032), mRFP1 (E1010), and double terminator (B0014 = B0012+B0011). |
14 | [CHECK: BAD PART !]
BBa_B0012 (2) |
Transcription Terminator for E. coli RNA polymerase | Spring 2014 BioBrick Distribution.
Plate 2, Well 2B. [Check! DT?]. |
Miniprep,
128 ng/uL, 01/07/14, TO. |
41 bp,
Genomic Sequence[Add sequence!] |
Plasmid Backbone: pSB1C3, i.e. chloramphenicol resistant (camR).
Plasmid / Vector Map |
TE from coliphage T7. This is a bad terminator (Experience: Fails). It is a promoter in the reverse direction. |
# | ID | Name / Function | Source | State / Concentration / Date Made | Gene Size / Sequence | Initial Plasmid / Vector | Comments |