Team:TU Eindhoven/Design Anchors

From 2014.igem.org

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   <img src="https://static.igem.org/mediawiki/2014/4/4b/TU_Eindhoven_COMPy_design.png">
   <img src="https://static.igem.org/mediawiki/2014/4/4b/TU_Eindhoven_COMPy_design.png">
   <figcaption>Figure 1. Gene design COMPy (INPNC)</figcaption>
   <figcaption>Figure 1. Gene design COMPy (INPNC)</figcaption>
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  <img src="https://static.igem.org/mediawiki/2014/4/43/TU_Eindhoven_COMPx_design.png">
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  <figcaption>Figure 2. Gene design COMPy (CPX)</figcaption>
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Revision as of 18:14, 21 September 2014

Project Description

Membrane Anchors

Gene Design

In short, both membrane proteins had a TAG codon introduced for the Non Natural Amino Acid and a HA-tag for detection methods. For INPNC the TAG codon and the HA-tag were introduced at the C terminus of the protein (figure 1). The CPX proteins already contained a peptide library part at the N-terminus so the TAG codon was introduced in that part. This has been done by using Site Directed Mutagenesis. The HA-tag was introduced at the C-terminus (figure 2). After modification the proteins were renamed to Clickable Outer Membrane Protein x (COMPx), originally CPX, and COMPy, originally INPNC.



Figure 1. Gene design COMPy (INPNC)


Figure 2. Gene design COMPy (CPX)


Bibliography

[1] Click Chemistry Tools, B. T. (n.d.). Products: TAMRA DBCO. Retrieved July 23, 2014, from https://www.clickchemistrytools.com/products/click_chemistry_toolbox/azide_cycloalkyne_click_chemistry/cyclooctynes/fluorescent_probes/tamra-dbco-prob/
[2] Macey, M. G. (2007). Cell Sorting by Flow Cytometry. In Flow Cytometry: Principles and Applications (pp. 257 - 276). Humana Press.