Team:UESTC-China/Project

From 2014.igem.org

(Difference between revisions)
Line 505: Line 505:
So a more efficient and more low-carbon technology is in badly need to remove formaldehyde.
So a more efficient and more low-carbon technology is in badly need to remove formaldehyde.
</p><br/>
</p><br/>
-
<p style="color:#1b1b1b;">As we all know that various plants can remove formaldehyde from indoor air by means of the uptake and metabolism <i>(Xu, Qin et al. 2010)</i>. It has been proved that formaldehyde as a central intermediate of photosynthetic carbon dioxide fixation in green plants can be removed by forming HM-GSH and finally turned to water and carbon dioxide (Fig.2A) . FALDH and FDH are the key enzymes for formaldehyde fixation. For the wild-type plants we know of now, they have limited capacity to metabolize formaldehyde and it's hard for them to survive in a high formaldehyde environment. At the same time, formaldehyde is also a key intermediate in the metabolism of several one-carbon (C1) compounds in methylotrophic microorganisms. Those microorganisms have a special metabolic pathway named ribulose monophosphate (RuMP) pathway (Fig.2B). 3-hexulose-6-phosphate (HPS) and 6-phospho-3-hexuloisomerase (PHI) are the key enzymes that affect the metabolism of formaldehyde. In the pathway, HPS fixes HCHO and D-ribulose-5-phosphate (Ru5P) to produce D-arabino-3-hexulose 6-phosphate (Hu6P), and 6-phospho-3- hexuloisomerase (PHI), which converts Hu6P to fructose 6-phosphate (F6P). Interestingly, Ru5P and F6P are also included in the Calvin-Benson cycle, so bacterial RuMP pathway and plant Calvin-Benson cycle can be connected if HPS and PHI can exist in plants.  
+
<p style="color:#1b1b1b;">As we all know that various plants can remove formaldehyde from indoor air by means of the uptake and metabolism <i>(Xu, Qin et al. 2010)</i>. It has been proved that formaldehyde as a central intermediate of photosynthetic carbon dioxide fixation in green plants can be removed by forming HM-GSH and finally turned to water and carbon dioxide (Fig.2A) . FALDH and FDH are the key enzymes for formaldehyde fixation. For the wild-type plants we know of now, they have limited capacity to metabolize formaldehyde and it's hard for them to survive in a high formaldehyde environment. At the same time, formaldehyde is also a key intermediate in the metabolism of several one-carbon (C1) compounds in methylotrophic microorganisms. Those microorganisms have a special metabolic pathway named ribulose monophosphate (RuMP) pathway (Fig.2B). 3-hexulose-6-phosphate (HPS) and 6-phospho-3-hexuloisomerase (PHI) are the key enzymes that affect the metabolism of formaldehyde. In the pathway, HPS fixes HCHO and D-ribulose-5-phosphate (Ru5P) to produce D-arabino-3-hexulose-6-phosphate (Hu6P), and 6-phospho-3-hexuloisomerase (PHI), which converts Hu6P to fructose-6-phosphate (F6P). Interestingly, Ru5P and F6P are also included in the Calvin-Benson cycle, so bacterial RuMP pathway and plant Calvin-Benson cycle can be connected if HPS and PHI can exist in plants.  
If realized, the capacity of formaldehyde uptake and metabolism will be greatly advanced. In addition, the use of plants to remove toxins from the air is more likely to be accepted by the public.
If realized, the capacity of formaldehyde uptake and metabolism will be greatly advanced. In addition, the use of plants to remove toxins from the air is more likely to be accepted by the public.
</p><br/>
</p><br/>
Line 514: Line 514:
</div><br/>
</div><br/>
-
<p style="color:#1b1b1b;">In our iGEM project, our objective is to further increase plant formaldehyde uptake and metabolism ability using synthetic biology methods. We use tobacco as our receptor plants for experiment. The key enzyme genes related to formaldehyde metabolism in methylotrophic microorganisms as well as in plants are integrated, as a result, the different formaldehyde metabolic pathways can work together and form a new one. Our project includes not only the genes mentioned above but also some other genes. The gene AHA2 from arabidopsis which can enlarge the stomatal opening is added to our project. If the gene expresses correctly, much more formaldehyde are absorbed, which provides sufficient substrate for the new formaldehyde metabolic pathway and boosts the metabolic rate .For security reasons, we include the gene ADCP into our project because of its capability of leading to pollen abortion. In that way, we can guarantee biosafety of our super plant (Fig.3).
+
<p style="color:#1b1b1b;">In our iGEM project, our objective is to further increase plant formaldehyde uptake and metabolism ability using synthetic biology methods. We use tobacco as our receptor plants for experiment. The key enzyme genes related to formaldehyde metabolism in methylotrophic microorganisms as well as in plants are integrated, as a result, the different formaldehyde metabolic pathways can work together and form a new one. Our project includes not only the genes mentioned above but also some other genes. The gene <i>AHA2</i> from arabidopsis which can enlarge the stomatal opening is added to our project. If the gene expresses correctly, much more formaldehyde are absorbed, which provides sufficient substrate for the new formaldehyde metabolic pathway and boosts the metabolic rate .For security reasons, we include the gene ADCP into our project because of its capability of leading to pollen abortion. In that way, we can guarantee biosafety of our super plant (Fig.3).
</p><br/>
</p><br/>
<div align="center"><img style="width: 60%;" src="https://static.igem.org/mediawiki/2014/2/2d/Over_fig.3.jpg"/></div>
<div align="center"><img style="width: 60%;" src="https://static.igem.org/mediawiki/2014/2/2d/Over_fig.3.jpg"/></div>

Revision as of 11:30, 17 October 2014

UESTC-China