Team:Bielefeld-CeBiTec/Results/CO2-fixation/Measurement

From 2014.igem.org

(Difference between revisions)
Line 77: Line 77:
       <h6>Cultivation</h6>
       <h6>Cultivation</h6>
               <p>
               <p>
-
The aim of the cultivation was to characterize the carbon dioxide fixation in <i>E. coli</i> by an appropriate process. For this approach we wanted to establish a fermentation process, where <i>E. coli</i> is growing first under aeration to obtain aerobic growth conditions to determine the carbon dioxide fixation of the RuBisCo and the Carboxysome afterwrds under this condition, as well as conditions were oxygen is limited, but still aeration takes place. Besides we wanted to ensure that an effective carbon dioxide fixation would be measured. Therefore we gased in additional carbon dioxide, resulting in an 10 fold hihger atmospheric concentraction of 0,312 %.<br>  
+
The aim of the cultivation was to characterize the carbon dioxide fixation in <i>E. coli</i> by an appropriate process. For this approach we wanted to establish a fermentation process, where <i>E. coli</i> is growing first under aeration to obtain aerobic growth conditions to determine the carbon dioxide fixation of the RuBisCo and the Carboxysome afterwrds under this condition, as well as conditions were oxygen is limited, but still aeration takes place. Besides we wanted to ensure that an effective carbon dioxide fixation would be measured. Therefore we gased in additional carbon dioxide, resulting in an 10 fold hihger atmospheric concentraction of 0,312 %. Besides there were no experience described in litarature how much carbon dioxide can be used by a hetereotrophic bacteria like <i>E. coli</i>. To determine even the slightest change in the carbon dioxide balance a the very sensitive <a href="http://www.qubitbiology.com/algae-and-bacteria/photosynthesis-respiration-a-b/q-s151-co2-analyzer-0-2000ppm/" target="_blank">Qubit Analyzer</a> was used for the carbon dioxide fixation...<br>  
<center>
<center>
<div class="element" style="width:600px">
<div class="element" style="width:600px">

Revision as of 02:05, 18 October 2014



Module II - Carbon Dioxide (CO2) Fixation

Cultivation

The aim of the cultivation was to characterize the carbon dioxide fixation in E. coli by an appropriate process. For this approach we wanted to establish a fermentation process, where E. coli is growing first under aeration to obtain aerobic growth conditions to determine the carbon dioxide fixation of the RuBisCo and the Carboxysome afterwrds under this condition, as well as conditions were oxygen is limited, but still aeration takes place. Besides we wanted to ensure that an effective carbon dioxide fixation would be measured. Therefore we gased in additional carbon dioxide, resulting in an 10 fold hihger atmospheric concentraction of 0,312 %. Besides there were no experience described in litarature how much carbon dioxide can be used by a hetereotrophic bacteria like E. coli. To determine even the slightest change in the carbon dioxide balance a the very sensitive Qubit Analyzer was used for the carbon dioxide fixation...


Figure x: Carbonate equlibration.

Figure x: Carbonate equlibration.

Figure x: Calibration 10%.

Figure x: Calibration 4%.

Figure x: Calibration by linear fit of the output signal of the qubit analyzer to determine the carbon dioxide fixation.
x = y - 1555,34754 / 4,10739

Figure x: Comparision of the calibration by the measured carbon dioxide using the Qubit Analyzer and calculation from the measured flow rates of the system.

Figure x: Cultivation process.


References