Team:ETH Zurich/modeling/int

From 2014.igem.org

(Difference between revisions)
m (State of the Art)
m (Data)
 
Line 133: Line 133:
=== Data ===
=== Data ===
-
The parameter fitting is based on data from Bonnet's paper<sup>[[Team:ETH_Zurich/project/references|[9]]]</sup>. Their experimental setup is different from ours. However, they experimentally retrieve a transfer function between aTc and Bxb1 switching rate. Here is the figure of interest in our case.
+
The parameter fitting is based on the data available from Bonnet's paper<sup>[[Team:ETH_Zurich/project/references|[9]]]</sup>. Their experimental setup is different from ours. They induce the production of the integrase Bxb1 with aTc. Bxb1 can then flip a terminator put between a constitutive promoter and the gene for a reporter protein. They experimentally retrieve a transfer function between aTc and Bxb1 switching rate. Here is the figure of interest in our case.
[[File:ETH Zurich Bonnet S4.jpg|center|400px|thumb|'''Figure 2''' Transfer function from aTc to Bxb1. The experimental data corresponds to the points. They fitted this data with their own model. Supplementary figure S4 of Bonnet's paper ''Amplifying Genetic Logic Gates''<sup>[[Team:ETH_Zurich/project/references|[9]]]</sup>.]]
[[File:ETH Zurich Bonnet S4.jpg|center|400px|thumb|'''Figure 2''' Transfer function from aTc to Bxb1. The experimental data corresponds to the points. They fitted this data with their own model. Supplementary figure S4 of Bonnet's paper ''Amplifying Genetic Logic Gates''<sup>[[Team:ETH_Zurich/project/references|[9]]]</sup>.]]

Latest revision as of 01:09, 18 October 2014

iGEM ETH Zurich 2014