Team:Goettingen/project overview/project drylab results
From 2014.igem.org
Project
Dry lab
Results summary:
This is peptide IGP4 that shows interaction with ssr1 protein from Candida glabrata
This is peptide IGP4 that shows interaction with ssr1 protein from Candida glabrata
We obtained working structural models for our peptides inside their scaffolds. The following table is a summary of them. Please note that these models are not definitive, since they were obtained by homology modeling and loop refinement. Their main purpose is to give us an idea if the calculated energy profile matches our assumption that the peptide is being exposed to the exterior of the scaffold.
Peptide | PNG* | PDB | Description | Peptide location | Overall DOPE score | Energy profile |
Prey 3 | Download | Description | K17-E42 | -6637.57959 | Download | |
Prey 4.1 | Download | Description | K17-E44 | -6253.714355 | Download | |
Prey 5 | Download | Interacting with Pir4 (CAGL0I06160g) protein of Candida glabrata | K17-E44 | -6363.106934 | Download | |
Prey 13 | Download | Description | K17-E42 | -6283.989258 | Download | |
Prey 15 | Download | Description | K17-E42 | -6786.918457 | Download |