Team:Paris Bettencourt/Project

From 2014.igem.org

(Difference between revisions)
 
(75 intermediate revisions not shown)
Line 1: Line 1:
-
{{Team:Paris_Bettencourt/Wiki}}
 
{{Team:Paris_Bettencourt/Menu}}
{{Team:Paris_Bettencourt/Menu}}
<html>
<html>
-
<style>
+
<style>
-
 
+
body {
-
#topheader {
+
width : 100%;
-
        margin-left : 20%;
+
}
-
        width : 60%;
+
#topheader {
-
        height : 400px;
+
width : 100%;
-
        margin-top : 40px;
+
height : 700px;
-
}
+
margin-top : 40px;
-
 
+
background-image : url("https://static.igem.org/mediawiki/2014/d/de/RSPBProject.png");
-
#PBlogo {
+
background-size : cover;
-
float : left;
+
background-color : rgb(255,255,255);
-
width: 122px;
+
text-align : center;
-
margin-left : 23%;
+
-
}
+
-
 
+
-
 
+
-
 
+
-
 
+
-
h1 {
+
-
font-size : 0px;
+
-
}
+
-
 
+
-
h2 {
+
-
font-family : Times;
+
-
font-size : 30px;
+
-
text-decoration : underline;
+
-
margin-left : 40%;
+
-
}
+
-
 
+
-
#cadre {
+
-
border:5px double rgb(0,0,0);
+
-
align="center";
+
-
height ="45px";
+
-
color: rgb(0,0,0);
+
-
}
+
-
 
+
-
#link {
+
-
color : rgb(0,0,0);
+
-
}
+
-
 
+
-
#menu {
+
-
text-align : center;
+
-
height : 45px;
+
-
        width : 60%;
+
-
        margin-left : 20%;
+
-
        margin-right : 20%;
+
-
}
+
-
 
+
-
h5 {
+
-
text-align : justify;
+
-
margin-left :200px;
+
-
margin-right : 200px;
+
-
font-size : 15px;
+
-
}
+
-
 
+
-
p {
+
-
text-align : justify;
+
-
text-indent : 2%;
+
-
color : rgb(0,0,0);
+
-
margin-left : 20%;
+
-
margin-right : 20%;
+
-
}
+
-
 
+
-
h3 {
+
-
font-family : Times;
+
-
font-size : 30px;
+
-
text-decoration : underline;
+
-
margin-left : 200px
+
-
}
+
-
 
+
-
h4 {
+
-
font-family : Times;
+
-
font-size : 30px;
+
-
text-decoration : underline;
+
-
margin-left : 22%;
+
-
}
+
-
 
+
-
#liste {
+
-
color : rgb(0,0,0);
+
-
margin-left : 20%;
+
-
margin-right : 20%;
+
-
text-align : justify;
+
-
}
+
-
 
+
-
h6 {
+
-
        font-size : 18px;
+
-
        width : 60%;
+
-
        margin-left : 20%;
+
-
}
+
-
 
+
-
#subproject {
+
-
        list-style : none;
+
-
}
+
-
#subproject a {
+
-
        color : rgb(0,0,0)
+
-
}
+
-
 
+
-
#shadow {
+
-
margin-left : -30%;
+
-
float : left;
+
-
border-radius : 5px;
+
-
box-shadow : -1px 2px 10px 3px rgb(190,190,190) inset;
+
}
}
-
                #shadow a {
+
#subheader {
-
                        color : rgb(0,0,0);
+
width : 100%;
-
                }
+
height : 60px;
-
                #shadow ul {
+
background : rgb(255,0,99);
-
                        list-style : none;
+
margin-top : 0px;
-
                }
+
}
-
 
+
#subheader table {
-
 
+
width : 100%;
-
#menu-demo2 {
+
height : 100%;
-
list-style:none;
+
text-align : center;
-
text-align:center;
+
background : rgb(255,0,99);
-
}
+
}
-
#menu-demo2 ul{
+
#subheader table tr td {
-
list-style:none;
+
width : 14.2857%;
-
text-align:left;
+
color : rgb(255,255,255);
-
}
+
background : rgb(255,0,99);
-
#menu-demo2 li{
+
}
-
display:inline-block;
+
.description {
-
position:relative;
+
position : absolute;
-
border-radius:8px 8px 0 0;
+
height : 170px;
-
}
+
width : 100%;
-
#menu-demo2 ul li{
+
display : none;
-
display:inherit;
+
background-color : rgb(255,255,255);
-
border-radius:0;
+
z-index : 50;
-
}
+
left : 0;
-
#menu-demo2 ul li:hover{
+
margin-top : 30px;
-
border-radius:0;
+
text-align : center;
-
}
+
vertical-align : middle;
-
#menu-demo2 ul li:last-child{
+
}
-
border-radius:0 0 8px 8px;
+
#subheader table tr td:hover .description {
-
}
+
display : table-cell;
-
#menu-demo2 ul{
+
}
-
position:absolute;
+
.description p {
-
max-height:0;
+
width : 90%;
-
left: 0;
+
margin-left : 5%;
-
right: 0;
+
font-size : 15px;
-
overflow:hidden;
+
vertical-align : middle;
-
        -moz-transition: .5s all .2s;
+
color : rgb(150,149,149);
-
        -webkit-transition: .5s all .2s;
+
margin-top : 58px;
-
        transition: .5s all .2s;
+
}
-
}
+
#subheader table tr td a {
-
#menu-demo2 li:hover ul{
+
color : rgb(255,255,255);
-
max-height:15em;
+
text-decoration : none;
-
}
+
font-size : 18px;
-
 
+
}
-
#menu-demo2 li{
+
#top {
-
background-color: rgb(255,255,255);
+
position : fixed;
-
}
+
right : 20px;
-
 
+
bottom : 10px;
-
#menu-demo2 li li{
+
width : 25px;
-
background:rgb(255,255,255);
+
height : 25px;
-
}
+
z-index : 100;
-
 
+
}
-
#menu-demo2 li:hover, #menu-demo2 li li:hover{
+
#top img {
-
background:rgb(255,255,255);
+
width : 100%;
-
}
+
height : 100%;
-
 
+
}
-
#menu-demo2 a{
+
#descriptionmain {
-
text-decoration:none;
+
width : 100%;
-
display:block;
+
height : 200px;
-
padding:8px 32px;
+
}
-
color: rgb(0,0,0);
+
#main {
-
font-family:arial;
+
                      display : block;
-
}
+
                      z-index : 0;
-
#menu-demo2 ul a{
+
}
-
padding:8px 0;
+
</style>
-
}
+
<body>
-
#menu-demo2 li:hover li a{
+
<p id=top><a href="#topheader"><img src="https://static.igem.org/mediawiki/2014/4/41/Arrow.png"></a></p>
-
color:rgb(0,0,0);
+
<div id="topheader"></div>
-
text-transform:inherit;
+
<div id=subheader>
-
}
+
<table>
-
#menu-demo2 li:hover a, #menu-demo2 li li:hover a{
+
<tr>
-
color:rgb(0,0,0);
+
<td><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Odor_Library">SMELL THE ROSES</a><div class=description><p> Here we present a genetic odor palette. It is built of BioBricks to express enzymes to produce volatile compounds with characteristic smells. We included smells with different tonalities to allow exploration of the "odor space" resulting from combinations of smelly units.</p></div></td>
-
}
+
<td><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/TMAU">SOMETHING FISHY</a><div class=description><p>Trimethylaminuria (TMAU) is a rare genetic disease causing a strong fish odor. Our project aims at engineering skin bacteria to degrade trimethylamine, the odor causing molecule, with the enzyme trimethylamine monooxygenase (TMM).</p></div></td>
-
 
+
<td><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Foot_Odor">GOODY TWO SHOES</a><div class=description><p>Isovaleric acid, the cheesy component of foot odor, is produced by <i>B. subtilis</i> through the leucine degradation pathway. We characterize a <i>B. subtilis</i> mutant in this pathway, <i>in vitro</i> and <i>in situ</i> (on socks).</p></div></td>
-
#menu-horizontal {
+
<td><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Eliminate_Smell">DON'T SWEAT IT</a><div class=description><p>Armpit odor comes mainly from aminoacylase enzymes expressed in the genus Corynebacteria. This project is developing CRISPR technology to isolate natural bacterial mutants that lack these enzymes.</p></div></td>
-
float : left;
+
<td><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Old_People_Smell">TEEN SPIRIT</a><div class=description><p>2-nonenal is "old people smell," a component of sweat that increases with age. Here we isolate and characterize bacterial species that metabolize 2-nonenal and attenuate its characteristic odor.</p></div></td>
-
position : fixed;
+
<td><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Art">DESIGN PRACTICE</a><div class=description><p>Science is beautiful.</p></div></td>
-
top : 10px;
+
<td><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Bioinformatics">BIOINFORMATICS</a><div class=description><p>Here we mine human microbiome data to survey the frequency and diversity of genes related to body odor. The results suggest specific hotspots for odor gene variation.</p></div></td>
-
text-align : center;
+
<td><div id=main class=description><p>All humans have a body odor, but sometimes it is unwanted. Our core projects modify the natural human skin flora to change body odors associated with the armpit, foot, fish odor syndrome and old age.</p></div></td>
-
background : rgb(255,255,255);
+
</tr>
-
        margin-right : auto;
+
</table>
-
        margin-left : auto;
+
-
        width : 100%;
+
-
}
+
-
 
+
-
 
+
-
</style>
+
-
 
+
-
<head>
+
-
 
+
-
 
+
-
 
+
-
<div id="topheader">
+
-
 
+
-
<img id="PBlogo" src="https://static.igem.org/mediawiki/2013/3/3a/PB_logoParis.gif"/>
+
-
 
+
-
<h2>Paris Bettencourt 2014</h2>
+
-
 
+
-
</div>
+
-
 
+
-
</head>
+
-
 
+
-
<body>
+
-
 
+
-
<div id="shadow">
+
-
<ul id="menu-accordeon">
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Odor_Library">+ Odor Library</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Old_People_Smell">+ Old People Smell</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/TMAU">+ TMAU</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Foot_Odor" id="link">+ Foot Odor</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Eliminate_Smell" id="link">+ Eliminate Smell</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Gym_Class_Heroes" id="link">+ Gym Class Heroes</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Interlab_Study" id="link">+ Interlab Study</a></li>
+
-
</ul>
+
</div>
</div>
-
 
+
<div id=descriptionmain>
-
<div>
+
                </div>
-
 
+
</body>
-
</br>
+
-
 
+
-
<h4>Project Description</h4>
+
-
 
+
-
</br>
+
-
 
+
-
<h6 id=h6>It has always been the objective of iGEM Paris Bettencourt to conduct novel
+
-
projects. This year, our team has decided to explore a topic that has rarely been
+
-
approached by synthetic biologists in this competition: odor.
+
-
</h6>
+
-
 
+
-
</br>
+
-
 
+
-
<p id=text>
+
-
Human olfaction relies on a tremendous number of cellular receptors that can
+
-
detect specific molecules in the air. Upon the detection of combination of these
+
-
compounds, a message is sent to the brain, which leads to the perception of one unique
+
-
odor. There is considerable work left to do in order to understand the sense of smell,
+
-
especially in determining how olfactory receptors operate.
+
-
Few synthetic biologists have tried to engineer bacteria to produce smell or to
+
-
treat bad smell since the production of odor by microorganisms is not studied often. One
+
-
reason for the lack of study in this area is that it is hard to quantify and characterize an
+
-
odor. We will overcome this by using odor professionals and commonly used scientific
+
-
tools. We want to do this in order to investigate the links between our skin microbiota
+
-
and body odor, as well as the perception of one's body odor by others.
+
-
</p>
+
-
 
+
-
 
+
-
<h4>Subproject</h4>
+
-
 
+
-
</br>
+
-
 
+
-
<div id="liste">
+
-
<ul id=subproject>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Odor_Library">Odor Library</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Old_People_Smell">Old People Smell</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/TMAU">TMAU</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Citizen_Science">Gym Class Heroes</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Eliminate_Smell">Eliminate Smell</a></li>
+
-
<li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Foot_Odor">Foot Odor</a></li>
+
-
        <li><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Interlab_Study" id="link">Interlab Study</a></li>
+
-
</ul>
+
-
</div>
+
-
 
+
-
 
+
-
</body>
+
-
 
+
-
 
+
-
 
+
-
 
+
</html>
</html>
-
 
+
{{:Team:Paris_Bettencourt/Footer}}
-
 
+
-
 
+
-
<!--
+
-
 
+
-
<html>
+
-
 
+
-
 
+
-
<style>
+
-
 
+
-
#h3 {
+
-
font-family : Times;
+
-
font-size : 30px;
+
-
text-decoration : underline;
+
-
        margin-left : 200px
+
-
}
+
-
 
+
-
#h4 {
+
-
font-family : Times;
+
-
font-size : 20px;
+
-
text-decoration : underline;
+
-
        margin-left : 220px
+
-
}
+
-
 
+
-
#liste {
+
-
        color : rgb(0,0,0);
+
-
        margin-left : 240px;
+
-
}
+
-
 
+
-
</style>
+
-
<head>
+
-
<table width="70%" align="center">
+
-
 
+
-
<tr>
+
-
 
+
-
 
+
-
<td align="center" colspan="3">
+
-
 
+
-
<table  width="100%">
+
-
<tr heigth="15px"></tr>
+
-
<tr heigth="75px">
+
-
 
+
-
 
+
-
<td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7> 
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt"style="color:#000000">Home </a> </td>
+
-
 
+
-
<td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt/Team"style="color:#000000"> Team </a> </td>
+
-
 
+
-
<td style="border:1px solid black;" align="center"  height ="45px"  onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
+
-
<a href="https://igem.org/Team.cgi?year=2014&team_name=Paris_Bettencourt"style="color:#000000"> Official Team Profile </a></td>
+
-
 
+
-
<td style="border:1px solid black" align="center"  height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7> 
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt/Project"style="color:#000000"> Project</a></td>
+
-
 
+
-
<td style="border:1px solid black;" align="center"  height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt/Parts"style="color:#000000"> Parts</a></td>
+
-
 
+
-
<td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt/Modeling"style="color:#000000"> Modeling</a></td>
+
-
 
+
-
<td style="border:1px solid black;" align="center" height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7> 
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt/Notebook"style="color:#000000"> Notebook</a></td>
+
-
 
+
-
<td style="border:1px solid black;" align="center"  height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt/Safety"style=" color:#000000"> Safety </a></td>
+
-
 
+
-
<td style="border:1px solid black;" align="center"  height ="45px" onMouseOver="this.bgColor='#d3d3d3'" onMouseOut="this.bgColor='#e7e7e7'" bgColor=#e7e7e7>
+
-
<a href="https://2014.igem.org/Team:Paris_Bettencourt/Attributions"style="color:#000000"> Attributions </a></td>
+
-
 
+
-
 
+
-
<td align ="center"> <a href="https://2014.igem.org/Main_Page"> <img src="https://static.igem.org/mediawiki/igem.org/6/60/Igemlogo_300px.png" width="55px"></a> </td>
+
-
</tr>
+
-
</table>
+
-
 
+
-
</tr>
+
-
</tr>
+
-
</td>
+
-
</head>
+
-
 
+
-
<body>
+
-
<tr> <td colspan="3"  height="15px"> </td></tr>
+
-
<tr><td bgColor="#e7e7e7" colspan="3" height="1px"> </tr>
+
-
<tr> <td colspan="3"  height="5px"> </td></tr>
+
-
 
+
-
<div>
+
-
<h3 id="h3">Project Description</h3>
+
-
 
+
-
<h4 id="h4">Subproject</h4>
+
-
<div id="liste">
+
-
<p> - <a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Odor_Library">Engineering bacteria to produce an odor library<br/></a>
+
-
- <a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Probiotics">Designing probiotics and cosmetic products aimed to help people with strong body odour<br/></a>
+
-
- <a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Old_People_Smell">Old_People_Smell<br/></a>
+
-
- <a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/TMAU">Treating a genetic disease leading certain persons to have strong malodour<br/></a>
+
-
- <a href="https://2014.igem.org/Team:Paris_Bettencourt/Project/Citizen_Science">Launching a citizen science project aiming to learn about our microbiomes and how people perceive other’s smell<br/></a>
+
-
</p>
+
-
</div>
+
-
</div>
+
-
 
+
-
 
+
-
 
+
-
 
+
-
<tr><td >Project Description</td>
+
-
<td ></td >
+
-
<td ></td>
+
-
</tr>
+
-
 
+
-
<tr>
+
-
<td width="45%"  valign="top">
+
-
<p>Tell us more about your project.  Give us background.  Use this as the abstract of your project.  Be descriptive but concise (1-2 paragraphs) </p>
+
-
<br>
+
-
<h5>References </h5>
+
-
<p>
+
-
iGEM teams are encouraged to record references you use during the course of your research. They should be posted somewhere on your wiki so that judges and other visitors can see how you though about your project and what works inspired you. </p>
+
-
</td>
+
-
 
+
-
<td></td>
+
-
<td  width="45%"  valign="top">
+
-
<p> You can use these subtopics to further explain your project</p>
+
-
 
+
-
<ol>
+
-
<li>Overall project summary</li>
+
-
<li>Project Details</li>
+
-
<li>Materials and Methods</li>
+
-
<li>The Experiments</li>
+
-
<li>Results</li>
+
-
<li>Data analysis</li>
+
-
<li>Conclusions</li>
+
-
</ol>
+
-
 
+
-
<p>
+
-
It's important for teams to describe all the creativity that goes into an iGEM project, along with all the great ideas your team will come up with over the course of your work.
+
-
</p>
+
-
 
+
-
<p>
+
-
It's also important to clearly describe your achievements so that judges will know what you tried to do and where you succeeded. Please write your project page such that what you achieved is easy to distinguish from what you attempted.
+
-
</p>
+
-
 
+
-
</td>
+
-
 
+
-
</tr>
+
-
 
+
-
</body>
+
-
</table>
+
-
</html>
+
-
-->
+

Latest revision as of 20:48, 17 October 2014

SMELL THE ROSES

Here we present a genetic odor palette. It is built of BioBricks to express enzymes to produce volatile compounds with characteristic smells. We included smells with different tonalities to allow exploration of the "odor space" resulting from combinations of smelly units.

SOMETHING FISHY

Trimethylaminuria (TMAU) is a rare genetic disease causing a strong fish odor. Our project aims at engineering skin bacteria to degrade trimethylamine, the odor causing molecule, with the enzyme trimethylamine monooxygenase (TMM).

GOODY TWO SHOES

Isovaleric acid, the cheesy component of foot odor, is produced by B. subtilis through the leucine degradation pathway. We characterize a B. subtilis mutant in this pathway, in vitro and in situ (on socks).

DON'T SWEAT IT

Armpit odor comes mainly from aminoacylase enzymes expressed in the genus Corynebacteria. This project is developing CRISPR technology to isolate natural bacterial mutants that lack these enzymes.

TEEN SPIRIT

2-nonenal is "old people smell," a component of sweat that increases with age. Here we isolate and characterize bacterial species that metabolize 2-nonenal and attenuate its characteristic odor.

DESIGN PRACTICE

Science is beautiful.

BIOINFORMATICS

Here we mine human microbiome data to survey the frequency and diversity of genes related to body odor. The results suggest specific hotspots for odor gene variation.

All humans have a body odor, but sometimes it is unwanted. Our core projects modify the natural human skin flora to change body odors associated with the armpit, foot, fish odor syndrome and old age.

Centre for Research and Interdisciplinarity (CRI)
Faculty of Medicine Cochin Port-Royal, South wing, 2nd floor
Paris Descartes University
24, rue du Faubourg Saint Jacques
75014 Paris, France
+33 1 44 41 25 22/25
paris-bettencourt-igem@googlegroups.com
Copyright (c) 2014 igem.org. All rights reserved.