Team:Paris Bettencourt/Parts

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<h1></h1>
 
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<h2>Paris Bettencourt 2014</h2>
 
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<table id=menu>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt" id = "link">Home </a> </td>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt/Team" id = "link"> Team </a> </td>
 
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<td id = "cadre"><a href="https://igem.org/Team.cgi?year=2014&team_name=Paris_Bettencourt" id = "link"> Official Team Profile </a></td>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt/Project" id = "link"> Project</a></td>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt/Parts" id = "link"> Parts</a></td>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt/Modeling" id = "link"> Modeling</a></td>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt/Notebook" id = "link"> Notebook</a></td>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt/Safety" id = "link"> Safety </a></td>
 
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<td id = "cadre"><a href="https://2014.igem.org/Team:Paris_Bettencourt/Attributions" id = "link"> Attributions </a></td>
 
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<p id=top><a href="#topheader"><img src="https://static.igem.org/mediawiki/2014/4/41/Arrow.png"></a></p>
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<img src="https://static.igem.org/mediawiki/2014/4/4e/PB14parts.png" class=nameimg>
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<div id="topheader">
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<div id=logo><img id=logoblanc src="https://static.igem.org/mediawiki/2014/7/7d/Logoblanc.png"><img id=logorose src="https://static.igem.org/mediawiki/2014/2/28/Logorose.png"></div>
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<td><b>SMELL THE ROSES</b></br>
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<p class=text1><ul><li><a href="#part1">BBa_K1403003</a></li><li><a href="#part2">BBa_K1403006</a></li><li><a href="#part3">BBa_K1403009</a></li><li><a href="#part4">BBa_K1403012</a></li><li><a href="#part5">BBa_K1403017</a></li><li><a href="#part6">BBa_K1403019</a></li><li><a href="#part11">BBa_K1403013</a></li><li><a href="#part6">BBa_K1403019</a></li></ul></p></td>
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<td><b>SOMETHING FISHY</b></br>
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<p class=text1><ul><li><a href="#part7">BBa_K1403015</a></li></ul></br>
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                        <td><b>DON'T SWEAT IT</b><p class=text1><ul><li><a href="#part8">BBa_K1403018</a></li></ul></p></td>
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<td><b>INTERLAB STUDY</b></br>
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<p class=text1><ul><li><a href="#part9">BBa_K1403000</a></li><li><a href="#part10">BBa_K1403001</a></li></ul></p></td>
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</table>
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        </div>
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        <div class=project><h6>Smell the roses</h6>
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        <div class=part id=part1><p class=text1><a target="blank" href="http://parts.igem.org/Part:BBa_K1403003"><u>BBa_K1403003</a> - Limonene synthase</u> Limonene syntheses enzyme converts farnesyl-diphosphate to (+)-limonene, which is a component of lemon scent.</p></div>
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        <div class=part id=part2><p class=text1><u><a target="blank" href="http://parts.igem.org/Part:BBa_K1403006">BBa_K1403006</a> - Jasmonic acid carboxyl methyltransferase</u> Jasmonic acid carboxyl methyltransferase catalyzes the formation of methyl jasmonate from jasmonic acid.</p></div>
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<div class=part id=part3><p class=text1><u><a target="blank" href="http://parts.igem.org/Part:BBa_K1403009">BBa_K1403009</a> - <i>bmst1</i></u> BMST1 enzyme that catalyzes production of methyl salicylate from salicylic acid. Methyl salicylate has a wintergreen smell. It laso produces floral smell (Methyl benzoate) from Benzoic acid.</p> </div>
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        <div class=part id=part4><p class=text1><u><a target="blank" href="http://parts.igem.org/Part:BBa_K1403012">BBa_K1403012</a> - alcohol acetyltransferase I</u> This enzyme converts isoamyl alcohol to isoamyl acetate producing banana odor.</p></div>
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  <div class=part id=part5><p class=text1><a target="blank" href="http://parts.igem.org/Part:BBa_K1403013"><u>BBa_K1403013</a> - Germacradienol/germacrene D synthase</u> This enzyme produces Geosmin (rain smell) from farnesyl diphosphate.</p></div>
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        </div>   
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<div class=part id=part6><p class=text1><a target="blank" href="http://parts.igem.org/Part:BBa_K1403017"><u>BBa_K1403017</a> - <i>aldB</i></u> AldB stimulates acetolactate decarboxylase activities to transform acetolactate to acetoin, which smells like butter.</p></div>
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        <div class=part id=part7><p class=text1><a target="blank" href="http://parts.igem.org/Part:BBa_K1403019"><u>BBa_K1403019</a> - <i>ilvBN</i></u> <i>ilvBN</i> gene encodes for acetolactate synthase process. We used it to increase basal production of acetolactate, which serves as precursor for acetoin production.</p></div>
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</body>
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        <div class=project><h6>Something fishy</h6>
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            <div class=part id=part7><p class=text1><a target="blank" href="http://parts.igem.org/Part:BBa_K1403015"><u>BBa_K1403015</a> - Trimethylamine monooxygenase</u> Trimethylamine monooxygenase enzyme degrades Trimethylamine (fish odor) into non-smelly compund. It also produces indigo (blue pigment) form  tryptophan.</p></div>
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        </div>
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        </div>
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        <div class=project><h6>Don't sweat it</h6>
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        <div class=part id=part8><p class=text1><u><a target="blank" href="http://parts.igem.org/Part:BBa_K1403015">BBa_K1403018 - <i>agaA</i></a></u> <i>AgaA</i> is a gene present in Corynebacterium striatum and it is the main responsible for body odor. It transforms 3-methyl-2-hexenoic acid into 3-hydroxy-3-methylhexanoic acid which smells like sweat.</p></div>
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        </div>
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<div class=project><h6>Interlab study</h6>
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  <div class=part id=part9><p class=text1><u><a target="blank" href="http://parts.igem.org/Part:BBa_K1403000">BBa_K1403000</a> - GFP under strong promoter in pSB1C3</u> Measurment kit test of Part:<a href="http://parts.igem.org/Part:BBa_J23101">BBa_J23101</a> in pSB1C3. This part is a tween of <a href="http://parts.igem.org/Part:BBa_I20260">BBa_I20260</a> but in a high copy pSB1C3 plasmid. </p></div>
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<div class=part id=part10><p class=text1><u><a target="blank" href="http://parts.igem.org/Part:BBa_J23101">BBa_J23101</a>BBa_K1403000</a> - GFP generator under a weak promoter in pSB1C3</u> Measurment kit test of <a href="http://parts.igem.org/Part:BBa_J23115">BBa_J23115</a> in pSB1C3. It is placed in a high coply plasmid,the GFP expression is under a weak Anderson promoter.</p></div>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt"style="color:#000000">Home </a> </td>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt/Team"style="color:#000000"> Team </a> </td>
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<a href="https://igem.org/Team.cgi?year=2014&team_name=Paris_Bettencourt"style="color:#000000"> Official Team Profile </a></td>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt/Project"style="color:#000000"> Project</a></td>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt/Parts"style="color:#000000"> Parts</a></td>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt/Modeling"style="color:#000000"> Modeling</a></td>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt/Notebook"style="color:#000000"> Notebook</a></td>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt/Safety"style=" color:#000000"> Safety </a></td>
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<a href="https://2014.igem.org/Team:Paris_Bettencourt/Attributions"style="color:#000000"> Attributions </a></td>
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<td align ="center"> <a href="https://2014.igem.org/Main_Page"> <img src="https://static.igem.org/mediawiki/igem.org/6/60/Igemlogo_300px.png" width="55px"></a> </td>
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<!--Parts Submitted to the Registry  -->
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<tr><td > <h3> Parts Submitted to the Registry </h3></td>
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<td > <h3>What information do I need to start putting my parts on the Registry? </h3></td>
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An important aspect of the iGEM competition is the use and creation of standard  biological parts. Each team will make new parts during iGEM and will submit them to the <a href="http://partsregistry.org"> Registry of Standard Biological Parts</a>. The iGEM software provides an easy way to present the parts your team has created. The "groupparts" tag will generate a table with all of the parts that your team adds to your team sandbox. 
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<p>
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<strong>Note that if you want to document a part you need to document it on the <a href="http://partsregistry.org Registry"> Registry</a>, not on your team wiki.</strong> Future teams and other users and are much more likely to find parts on the Registry than on your team wiki.
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Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without a need to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.
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<h3>When should you put parts into the Registry?</h3>
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As soon as possible! We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better recall you will have of all details surrounding your parts. Remember you don't need to send us the DNA to create an entry for a part on the Registry. However, you must send us the sample/DNA before the Jamboree. Only parts for which you have sent us samples/DNA are eligible for awards and medal requirements.
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<td > </td>
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The information needed to initially create a part on the Registry is:
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<ol>
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<li>Part Name</li>
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<li>Part type</li>
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<li>Creator</li>
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<li>Sequence</li>
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<li>Short Description (60 characters on what the DNA does)</li>
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<li>Long Description (Longer description of what the DNA does)</li>
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<li>Design considerations</li>
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We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. Check out part <a href="http://parts.igem.org/Part:BBa_K404003">BBa_K404003</a> for an excellent example of a highly characterized part.
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You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry"> Add a Part to the Registry</a> link.
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<tr> <td colspan="3"  height="15px"> </td></tr>
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<tr><td colspan="3" > <h3> Parts Table</h3></td></tr>
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<tr><td width="45%" colspan="3"  valign="top">
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Any parts your team has created will appear in this table below:</td></tr>
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<groupparts>iGEM013 Paris_Bettencourt</groupparts>
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Latest revision as of 03:52, 18 October 2014

Smell the roses

BBa_K1403003 - Limonene synthase Limonene syntheses enzyme converts farnesyl-diphosphate to (+)-limonene, which is a component of lemon scent.

BBa_K1403006 - Jasmonic acid carboxyl methyltransferase Jasmonic acid carboxyl methyltransferase catalyzes the formation of methyl jasmonate from jasmonic acid.

BBa_K1403009 - bmst1 BMST1 enzyme that catalyzes production of methyl salicylate from salicylic acid. Methyl salicylate has a wintergreen smell. It laso produces floral smell (Methyl benzoate) from Benzoic acid.

BBa_K1403012 - alcohol acetyltransferase I This enzyme converts isoamyl alcohol to isoamyl acetate producing banana odor.

BBa_K1403013 - Germacradienol/germacrene D synthase This enzyme produces Geosmin (rain smell) from farnesyl diphosphate.

BBa_K1403017 - aldB AldB stimulates acetolactate decarboxylase activities to transform acetolactate to acetoin, which smells like butter.

BBa_K1403019 - ilvBN ilvBN gene encodes for acetolactate synthase process. We used it to increase basal production of acetolactate, which serves as precursor for acetoin production.

Something fishy

BBa_K1403015 - Trimethylamine monooxygenase Trimethylamine monooxygenase enzyme degrades Trimethylamine (fish odor) into non-smelly compund. It also produces indigo (blue pigment) form tryptophan.

Don't sweat it

BBa_K1403018 - agaA AgaA is a gene present in Corynebacterium striatum and it is the main responsible for body odor. It transforms 3-methyl-2-hexenoic acid into 3-hydroxy-3-methylhexanoic acid which smells like sweat.

Interlab study

BBa_K1403000 - GFP under strong promoter in pSB1C3 Measurment kit test of Part:BBa_J23101 in pSB1C3. This part is a tween of BBa_I20260 but in a high copy pSB1C3 plasmid.

BBa_J23101BBa_K1403000 - GFP generator under a weak promoter in pSB1C3 Measurment kit test of BBa_J23115 in pSB1C3. It is placed in a high coply plasmid,the GFP expression is under a weak Anderson promoter.

Centre for Research and Interdisciplinarity (CRI)
Faculty of Medicine Cochin Port-Royal, South wing, 2nd floor
Paris Descartes University
24, rue du Faubourg Saint Jacques
75014 Paris, France
+33 1 44 41 25 22/25
paris-bettencourt-igem@googlegroups.com
Copyright (c) 2014 igem.org. All rights reserved.

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