Team:LA Biohackers/Project

From 2014.igem.org

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<td width="45%"  valign="top">  
<td width="45%"  valign="top">  
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<p>We are using <i>Bacillus subtilus</i> as a backbone to incorporate the entire     
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<p>We are using <i>Bacillus subtilis</i> as a backbone to incorporate the entire     
   genome of <i>Streptococcus thermophilus</i>. Once incorporated, we will use the  
   genome of <i>Streptococcus thermophilus</i>. Once incorporated, we will use the  
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   cre/lox recombination system to remove the <i>Bacillus subtilus</i> genome so  
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   cre/lox recombination system to remove the <i>Bacillus subtilis</i> genome so  
   only the <i>Streptococcus thermophilus</i> genome remains. This will demonstrate
   only the <i>Streptococcus thermophilus</i> genome remains. This will demonstrate
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   the use of <i>Bacillus subtilus</i> as a useful chassis to boot up an artificial  
+
   the use of <i>Bacillus subtilis</i> as a useful chassis to boot up an artificial  
   genome.</p>
   genome.</p>
<p>As you may have guessed from the sly shift in tense from present to future, we
<p>As you may have guessed from the sly shift in tense from present to future, we
   did not actually succeed in transferring the entire genome of <i>Streptococcus thermophilus</i>
   did not actually succeed in transferring the entire genome of <i>Streptococcus thermophilus</i>
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   into <i>Bacillus subtilus</i> -- yet. We have developed, and will describe, a method which  
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   into <i>Bacillus subtilis</i> -- yet. We have developed, and will describe, a method which  
   we believe will enable us to do so, and the results we have obtained for the early  
   we believe will enable us to do so, and the results we have obtained for the early  
   steps in that method have been encouraging. We still believe it may be possible to
   steps in that method have been encouraging. We still believe it may be possible to
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<tr><td > <h3>Why <i>S. Thermophillus</i> and <i>B. Subtillus</i>?</h3></td>
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<tr><td > <h3>Why <i>S. Thermophilus</i> and <i>B. Subtilis</i>?</h3></td>
<td ></td >
<td ></td >
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<td > <h3>The bacteria arrives.</h3></td>
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<td > <h3>The bacteria arrive.</h3></td>
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Revision as of 19:14, 17 October 2014


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Project Description

The Plan

We are using Bacillus subtilis as a backbone to incorporate the entire genome of Streptococcus thermophilus. Once incorporated, we will use the cre/lox recombination system to remove the Bacillus subtilis genome so only the Streptococcus thermophilus genome remains. This will demonstrate the use of Bacillus subtilis as a useful chassis to boot up an artificial genome.

As you may have guessed from the sly shift in tense from present to future, we did not actually succeed in transferring the entire genome of Streptococcus thermophilus into Bacillus subtilis -- yet. We have developed, and will describe, a method which we believe will enable us to do so, and the results we have obtained for the early steps in that method have been encouraging. We still believe it may be possible to accomplish our original goal, and will continue to pursue it in the weeks and months to come.


And so it begins...

Why S. Thermophilus and B. Subtilis?

The bacteria arrive.

We chose these model organisms for this project because they're both gram positive low G-C ratio Firmicutes.

Since we're attempting a biochemistry transplant, the fact that they're evolutionary cousins should help.

Right side paragraph 1.

References

iGEM teams are encouraged to record references you use during the course of your research. They should be posted somewhere on your wiki so that judges and other visitors can see how you though about your project and what works inspired you.

You can use these subtopics to further explain your project

  1. Overall project summary
  2. Project Details
  3. Materials and Methods
  4. The Experiments
  5. Results
  6. Data analysis
  7. Conclusions

It's important for teams to describe all the creativity that goes into an iGEM project, along with all the great ideas your team will come up with over the course of your work.

It's also important to clearly describe your achievements so that judges will know what you tried to do and where you succeeded. Please write your project page such that what you achieved is easy to distinguish from what you attempted.