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Team:Evry/Biology/Chassis/Pseudovibrio
From 2014.igem.org
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| - | == From a poorly known genius. == | + | == <b><big>From a poorly known genius.</big></b> == |
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With only 12 species in the genius, and 2 strains sequenced (Pseudovibrio sp. FO-BEG1, Pseudovibrio sp. JE062) we knew we would have to sequence our strain of <i>Pseudovibrio denitrificans </i> with a mapping to one of the 2 strains references. The species was chosen because of its natural denitrification ability (cf <b><big> toxic compound</big></b>) and sourced at <b><big>DMSZ</big></b>. | With only 12 species in the genius, and 2 strains sequenced (Pseudovibrio sp. FO-BEG1, Pseudovibrio sp. JE062) we knew we would have to sequence our strain of <i>Pseudovibrio denitrificans </i> with a mapping to one of the 2 strains references. The species was chosen because of its natural denitrification ability (cf <b><big> toxic compound</big></b>) and sourced at <b><big>DMSZ</big></b>. | ||
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<li> be massively present on the sponge surface / avoiding being in an unfavorable position for food competition.</li> | <li> be massively present on the sponge surface / avoiding being in an unfavorable position for food competition.</li> | ||
<li> be found mainly in sponges / avoid spreading to species in contact with sponges.</li> | <li> be found mainly in sponges / avoid spreading to species in contact with sponges.</li> | ||
<li> be the phenotypically closest possible to a known bacterium. / avoid cell cultures difficulties.</li> | <li> be the phenotypically closest possible to a known bacterium. / avoid cell cultures difficulties.</li> | ||
</ul> | </ul> | ||
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Revision as of 14:31, 12 October 2014
Pseudovibrio denitrificans the bacterium to modify.
== From a poorly known genius. ==
With only 12 species in the genius, and 2 strains sequenced (Pseudovibrio sp. FO-BEG1, Pseudovibrio sp. JE062) we knew we would have to sequence our strain of Pseudovibrio denitrificans with a mapping to one of the 2 strains references. The species was chosen because of its natural denitrification ability (cf toxic compound) and sourced at DMSZ.
- be massively present on the sponge surface / avoiding being in an unfavorable position for food competition.
- be found mainly in sponges / avoid spreading to species in contact with sponges.
- be the phenotypically closest possible to a known bacterium. / avoid cell cultures difficulties.
