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CRISPR-X
CRISP-X
TEST REPORT
Version <1.2>
<10/13/2014>
VERSION HISTORY
In versions before v1.2, we did informal interior test report in Chinese, which helps us track bugs in our
project. In version 1.2, we provide detailed test report.
Versio
Implemented
Revision
Approved
Approval
Reason
n#
By
Date
By
Date
1.0
Youjin Zhang
08/14/2014
Bill Xue
08/17/2014
Test font-ends
communication with
server in json format
1.1
Yi Zhao
08/27/2014
Te Wu
08/29/2014
Test for server services
like user management,
results push service
1.2
Bill Xue
10/04/2014
Ying Tang
10/13/2014
Test for performance and
evaluate test coverage
Test Report (v1.2)
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CRISPR-X
Table of Contents
1.0
INTRODUCTION
3
1.1
Purpose
3
2.0
TEST SUMMARY
3
2.1
System
3
2.2
System
3
2.3
Function
3
2.4
Function
3
2.5
Function
4
2.6
Function
4
3.0
TEST ASSESSMENT
4
4.0
TEST INSTANCES 4
4.1
Resolved Test Incidents
4
4.2
Unresolved Test Incidents 5
5.0
RECOMMENDATIONS
5
APPENDIX A: TEST REPORT APPROVAL
6
APPENDIX B: REFERENCES
7
APPENDIX C: KEY TERMS 8
Test Report (v1.2)
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CRISPR-X
1.0 INTRODUCTION
1.1
PURPOSE
This CRISPR-X Test Report provides a summary of the results of test performed
as outlined within this document.
2.0 TEST SUMMARY
[Include basic information about what was tested and what happened.]
Project Name: CRISPR-X
Version Number: v1.2
Additional Comments: Test for software performance and evaluate test coverage
2.1
SYSTEM
Test for querying no-exit chromosome.
Test Owner: Bill Xue
Test Date: 10/04/2014
Test Results: Finished. Return null results, but no alarm for this illegal query
Additional Comments: To check this test results in details, please view this log,
on line
180 to 187
2.2
SYSTEM
Test basic user query and response in the situation that results isn’t in Table_results.
Test Owner: Bill Xue
Test Date: 10/05/2014
Test Results: Failed. Segmentation fault
Additional Comments: To check this test process in details, please view this log,
. Now,
this bug has been corrected.
2.3
FUNCTION
Test the function of querying location using gene name.
Test Owner: Bill Xue
Test Date: 10/06/2014
Test Results: Passed. Returns right results
ci.org/igemsoftware/UESTC-Software_2014/builds/37140231 on line 181 to 184
2.4
FUNCTION
Test function of checking RFC
Test Owner: Bill Xue
Test Date: 10/06/2014
Test Report (v1.2)
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CRISPR-X
Test Results: Finished. Returns right results
ci.org/igemsoftware/UESTC-Software_2014/builds/37140820
2.5
FUNCTION
Test for querying no-exit gene.
Test Owner: Bill Xue
Test Date: 10/11/2014
Test Results: Finished. Return null results, but no alarm for this illegal query
Additional Comments: To check this test results in details, please view this log,
on line
194 to 200
2.6
FUNCTION
Test for illegal RFC combination.
Test Owner: Bill Xue
Test Date: 10/12/2014
Test Results: Failed. Deadlock!
Additional Comments: To check this test results in details, please view this log,
3.0 TEST ASSESSMENT
This version of test report, we focus on our server performance to illegal query.
And in these test cases, we integrate with coverall.io to evaluate our test coverage.
As these above test cases show, the query attributes which users manually fill, on
boundary, our server response with null sgRNA results. But no alarm for these
illegal query. This part of test cases aren’t passed. Most badly, we found some
fatal error, the deadlock! Multi threads enhance program efficiency, but sometimes
this unpredictable. In fellow work, we need check our semaphore control, and
keep our program more safety. Through these test cases, our test coverage
increased to
83%, in details please check our reference
1. And all detailed
automatic test process can be found under reference 2.
4.0 TEST INSTANCES
4.1RESOLVED TEST INCIDENTS
Query in json.:
'{"specie":"Saccharomyces-cerevisiae","location":"NC_001134-
chromosome2:200..2873","pam":"NGG","rfc":"100010"}'`
Query in json:
Test Report (v1.2)
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CRISPR-X
'{"specie":"Saccharomyces-
cerevisiae","gene":"ATP1","pam":"NGG","rfc":"011101"}'
Query in json:
'{"specie":"Saccharomyces-cerevisiae","location":"NC_001135-
chromosome3:200..2873","pam":"NGG","rfc":"100010"}'
4.2UNRESOLVED TEST INCIDENTS
Query in json:
'{"specie":"Saccharomyces-
cerevisiae","gene":"XXXXX","pam":"NGG","rfc":"011101"}'
No alarm message.
Query in json:
'{"specie":"Saccharomyces-cerevisiae","location":"NC_001134-
chromosome2:200..2873","pam":"NGG","rfc":"110010"}'
No alarm message.
Query in json:
'{"specie":"Saccharomyces-cerevisiae","location":"NC_001135-
chromosome3:200..2873","pam":"NGG","rfc":"100010"}'
Deadlock.
7.0 RECOMMENDATIONS
Provide alarm message for every type of illegal queries. And check the thread
synchronization carefully, avoiding deadlock.
Test Report (v1.2)
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CRISPR-X
APPENDIX A: Test Report Approval
The undersigned acknowledge they have reviewed the CRISPR-X Test Report
and agree with the approach it presents. Changes to this Test Report will be
coordinated with and approved by the undersigned or their designated
representatives.
Signature:
Date:
10/13/2014
Print Name:
Ying Tang
Title:
CRISP-X Test report
Role:
Project Manager
Test Report (v1.2)
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CRISPR-X
APPENDIX B: REFERENCES
The following table summarizes the documents referenced in this document.
id
Description
Location
1
Our test coverage
records.
igem-2014/CRISPR-
X?branch=master
2
Our automatic test logs
ci.org/igemsoftware/UESTC-
Software_2014
Test Report (v1.2)
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CRISPR-X
APPENDIX C: KEY TERMS
The following table provides definitions for terms relevant to this document.
Term
Definition
Segmentation fault
segmentation fault
(often shortened to segfault) or
access violation is a fault raised by hardware with
memory protection, notifying an operating system (OS)
about a memory access violation
deadlock
A deadlock is a situation in which two or more
competing actions are each waiting for the other to
finish, and thus neither ever does
Test Report (v1.2)
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