Team:British Columbia/Notebook/Protocols/BiopanningAssay

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Revision as of 03:40, 18 October 2014

2014 UBC iGEM

Biopanning Assay


Unfixed chalcopyrite:

  1. Pre-sieve chalcopyrite with 40um size cell strainer. Then autoclave by Dry-5 times settings
  2. Incubate chalcopyrite (40um in size, 30mg) in culture of Caulobacter crescentus for 2hrs, shaking at low rpm.
  3. Filter chalcopyrite + Caulobacter crescentus using a 40um Falcon™ Cell Strainers
  4. Washing steps:
    • 1st round of panning: Wash strained chalcopyrite with 5ml 1x Tris-buffered saline (TBS) containing 0.1% (v/v) Tween-20, pH 7.2. Plate cells.
    • 2nd round of panning: Wash strained chalcopyrite with 5ml 1x Tris-buffered saline (TBS) containing 0.2% (v/v) Tween-20, pH 7.2.
    • 3rd round of panning: Wash strained chalcopyrite with 5ml 1x Tris-buffered saline (TBS) containing 0.3% (v/v) Tween-20, pH7.2.
    • 4th round panning: Wash strained chalcopyrite with 5ml 1x Tris-buffered saline (TBS) containing 0.4% (v/v) Tween-20, pH7.2.
    • 5th round panning: Wash strained chalcopyrite with 5ml 1x Tris-buffered saline (TBS) containing 0.5% (v/v) Tween-20, pH7.2