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Team:Peking/secondtry/JudgingCriteria
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Revision as of 17:07, 17 October 2014
Table 1. Aromatics-sensing transcriptional regulators mined from the Uniprot
| Protein names | Sources | Reported Typical Inducers </br>(<a href="https://static.igem.org/mediawiki/igem.org/2/24/Peking2013_Chemicals_V3%2B.pdf">Click Here</a> for the chemical formula of aromatic compounds) | Scores |
|---|---|---|---|
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/XylS">XylS</a> | Pseudomonas putida (Arthrobacter siderocapsulatus) | Benzoic acid | 259 |
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/XylR">XylR</a> | Pseudomonas putida (Arthrobacter siderocapsulatus) | m-Xylene | 219 |
| tyrR | Escherichia coli (strain K12) | tyrosine | 160 |
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/NahR">nahR</a> | Pseudomonas putida (Arthrobacter siderocapsulatus) | Salicylic acid | 106 |
| CapR | Pseudomonas putida (Arthrobacter siderocapsulatus) | phenol | 80 |
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/HcaR">hcaR</a> | Escherichia coli (strain K12) | 3-Phenyl-propionic acid | 56 |
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/DmpR">dmpR</a> | Pseudomonas sp. (strain CF600). | phenol | 43 |
| pobR | Pseudomonas putida(Arthrobacter siderocapsulatus) | p-Hydroxybenzoic acid | 29 |
| CymR | Pseudomonas putida (Arthrobacter siderocapsulatus) | 4-Isopropyl benzoate | 23 |
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/HpaR#ContentHpaR4">Paax</a> | Escherichia coli (strain K12) | phenylacedtyl-CoA | 20 |
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/HpaR">hpaR</a> | Pseudomonas putida (Arthrobacter siderocapsulatus) | (3-Hydroxy-phenyl)-acetic acid | 18 |
| mhpR | Escherichia coli (strain K12) | (3-Hydroxy-phenyl)-propionic acid | 18 |
| phhR | Pseudomonas putida (Arthrobacter siderocapsulatus) | phenylalanine | 16 |
| bphS | Pseudomonas sp. (strain CF600). | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid | 16 |
| <a href="https://2013.igem.org/Team:Peking/Project/BioSensors/HbpR">HbpR</a> | Pseudomonas nitroreducens | 2-Hydroxybiphenyl | 12 |
| phcR | Pseudomonas putida (Arthrobacter siderocapsulatus) | phenol | 11 |
| yodB | Bacillus subtilis (strain 168) | 2-methyl hydroquinone | 11 |
