Team:TU Delft-Leiden/Attributions

Attributions

Anton - Modeling Manager
My responsibilities were managing the modeling efforts of our team together with Mathijs. I did a lot of modeling myself as well, mainly FBA and Graph Theory. Also, I helped with fundraising and coding of our wiki. Besides that, I actively participated in a lot of discussions and actively co-operated with the life science department. Lastly, I edited a lot of texts and implemented them on the wiki.




Marielle - Personal contributions to the underlying project center on an exploratory literature study of carbon metabolism and protein chemistry with respect to (extracellular) electron transport as well as implementation of experimental techniques regarding, amongst others, cloning. These techniques include handling DNA and genes as discrete elements, understanding experimental processes and subsequently improving experimental setup, transforming one species of bacteria to another followed by exploration of (new / gained) functions and overall: approaching challenges multidisciplinary.




Cristy - Lab Manager
My personal contribution in the beginning of the project was reading articles and help with the implementation of ideas. During the project, I was also concerned with the understanding of the experimental processes and experimental setup. In the lab, I was mainly focused on the ET module. For this module and partly for the other modules, I did a lot of cloning and transformations. I was also involved in the characterization of the ET module and the implementation of these results. As a lab manager, one activity is taking care of the organization in the lab, so that everyone could work efficiently. Another activity was organizing labmeetings for the people who worked in the lab, to keep each other updated about the labwork. I also wrote a lot of protocols and wrote about the ET module for the wiki page. Outside the science and lab part, I also was involved in the fundraising process by contacting companies and organizations.




Duco – Policy&Practice Manager
In my role as Policy&Practice Manager, I conducted interviews with BDS,KMRD,EODD, and PAX and wrote the respective reports. Besides that, I’ve prepared, presented at, and reported on the RIVM meeting. I conducted the “Desk study concerning landmines” and I’ve written the Policy&Practice wikipages Overview, ELECTRACE, Outlook, and Outreach (except “Dutch National Meet-up”). Also, I prepared the stand at the Zomerfestival. Besides my P&P efforts, I’ve been involved in the modeling of the Landmine Module, the Deterministic Model of EET Complex Assembly, and, to a lesser degree, the FBA. I’ve also written the piece Techniques#DeterministicTheory. As for characterization, I’ve converted most of the raw data to figures.




Tomek – Science manager
In preparation for the summer I was involved in the study of literature on the ET and CC modules. I was involved in the design of the biobricks and cloning routes used to obtain them as well as the cloning-experiments themselves. I was responsible for the design and manufacturing of the Dropsens fluidics (DS) device, the paper microfluidics and for the manufacturing of the Mother Machine (MM) as well as the use of the MM and DS in experiments. I designed, wrote protocols, reported on and performed the bioreactor, congo red, crystal violet and Gold Nanoparticle experiments. I prepared and attended the RIVM meeting and the BDS interview together with Duco.




Anne - Science Manager
Literature study on Electron Transport, Conductive Curli and Landmine Detection to make a general experimental set-up. Develop cloning strategies including primer design for the Electron Transport, Conductive Curli and Landmine Detection modules. Cloning of BioBricks, including the Golden Gate Assembly for the BioBricks in the Electron Transport and Conductive Curli modules. Characterization of the Electron Transport BioBricks.




Joan – Science Manager and Safety Manager
Actively participated in the design of the BioBricks and in the development of the cloning strategies to obtain them. Primer design, including the primers for the Golden Gate Assembly method. Development of all sorts of molecular biology work required for the development of our BioBricks in the lab. Worked on the preparation and analysis of the sequencing samples of the received and created BioBricks. Kept in contact with former TU Delft iGEM students to prepare and send samples to collaborate with other iGEM teams. Development and performance of the Characterisation of the Landmine Detection module BioBricks (plate reader and FACS), as well as performance of some of the experiments for the Characterisation of the Conductive Curli module (plate reader and Confocal microscopy). Registered and provided a description of all the constructed BioBricks on the Parts Registry. Development of the Safety Protocol required for the permission of the Safety Manager of TU Delft Applied Sciences faculty to work with certain chemical compounds.

Anamaria -Team leader, has been setting-up the team, has created the timeline and had on overview on the main deadlines, established the communication channels for the team, has facilitated the general meetings (more than 60 in total), ensured the communication flow between the team members, advisors and other related stakeholders and supervised the overall activity of the team. In addition, she was organizing the mid-term presentations of our project. She was a key member in the fundraising process (by contributing to the content of our booklet, contacted companies, departments and other organizations), and was actively involved in the Policy& Practice department. Next, she provided support in writing the safety report and helped other departments measuring set-up for the curli resistance, small lab tasks.