Team:Kyoto/Notebook/DMS Synthesis
From 2014.igem.org
(Difference between revisions)
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<tr><td>10</td><td>8/2 cloning dddD 5µL</td></tr> | <tr><td>10</td><td>8/2 cloning dddD 5µL</td></tr> | ||
</table> | </table> | ||
- | + | <h2>9/14</h2> | |
+ | <h3>Gel Extraction</h3> | ||
+ | <span class="author">Honda,Yasuda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>Lane</th><th>DNA</th> | ||
+ | <tr><td>1</td><td>1kbp ladder</td></tr> | ||
+ | <tr><td>2</td><td>3/24 PCR(dddD)cloning E,S</td></tr> | ||
+ | <tr><td>3</td><td>9/13SAMmT(control)</td></tr> | ||
+ | <tr><td>4</td><td>9/13SAMmT(EP)</td></tr> | ||
+ | <tr><td>5</td><td>9/13Pcon-pSB1C3(control)</td></tr> | ||
+ | <tr><td>6</td><td>9/13Pcon-pSB1C3(XS)</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/13</h2> | ||
+ | <h3>Column cleanup</h3> | ||
+ | <span class="author">Yasuda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>Sample</th><th>density(µg/mL)</td><td>260/280</td><td>260/230</th></tr> | ||
+ | <tr><td>9/12 AT-EP</td><td>2.3</td><td>1.33</td><td>1.11</td></tr> | ||
+ | <tr><td>9/12 AT-His-XP</td><td>2.0</td><td>1.33</td><td>0.86</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/13</h2> | ||
+ | <h3>Ligation</h3> | ||
+ | <span class="author">Honda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>sumple</th><th>Vector</th><th>Insert</th><th>Ligase</th><th>2xBuffer</th><th>MilliQ</th></tr> | ||
+ | <tr><th>9/13 column cleanup AT(EP)+9/8 pSB1C3(EP)</th><td>1</td><td>3</td><td>1</td><td>5</td><td>0</td></tr> | ||
+ | <tr><th>9/13 column cleanup AT-His(XP)+9/13 pSB1C3(XP)</th><td>1</td><td>3</td><td>1</td><td>5</td><td>0</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/13</h2> | ||
+ | <h3>Miniprep</h3> | ||
+ | <span class="author">Honda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>Sample</th><th>density(µg/mL)</td><td>260/280</td><td>260/230</th></tr> | ||
+ | <tr><td>9/12 SAMmt-YCPlac111</td><td>140</td><td>1.80</td><td>1.90</td></tr> | ||
+ | <tr><td>9/12 T7-RBS-psB1C3</td><td>290</td><td>1.78</td><td>1.65</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/13</h2> | ||
+ | <h3>Liquid Culture</h3> | ||
+ | <span class="author">Yasuda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>Sample</th><th>Medium</th></tr> | ||
+ | <tr><td>9/12 dddD-pSB1C3</td><td>CP</td></tr> | ||
+ | <tr><td>9/12 dddD-pSB1C3</td><td>CP</td></tr> | ||
+ | <tr><td>9/12 dddD-pSB1C3</td><td>CP</td></tr> | ||
+ | <tr><td>9/12 T7-RBS-His</td><td>CP</td></tr> | ||
+ | <tr><td>9/12 T7-RBS-His</td><td>CP</td></tr> | ||
+ | <tr><td>9/12 T7-RBS-His</td><td>CP</td></tr> | ||
+ | <tr><td>control</td><td>CP</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/14</h2> | ||
+ | <h3>Colony PCR</h3> | ||
+ | <span class="author">Yasuda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th></th><th>Master Mix</th></tr> | ||
+ | <tr><td>Quick Taq</td><td>335</td></tr> | ||
+ | <tr><td>VF</td><td>13.4</td></tr> | ||
+ | <tr><td>VR</td><td>13.4</td></tr> | ||
+ | <tr><td>MilliQ</td><td>308.2</td></tr> | ||
+ | <tr><td>TOTAL</td><td>670</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/14</h2> | ||
+ | <h3>Gel Extraction</h3> | ||
+ | <span class="author">Honda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>Lane</th><th>DNA</th><th>volume</th> | ||
+ | <tr><td>1</td><td>1kbp ladder</td><td>5</td></tr> | ||
+ | <tr><td>2</td><td>3/24 PCR(dddD)cloning E,S</td><td>15</td></tr> | ||
+ | <tr><td>3</td><td>9/13SAMmT(control)</td><td>15</td></tr> | ||
+ | <tr><td>4</td><td>9/13SAMmT(EP)</td><td>15</td></tr> | ||
+ | <tr><td>5</td><td>9/13Pcon-pSB1C3(control)</td><td>15</td></tr> | ||
+ | <tr><td>6</td><td>9/13Pcon-pSB1C3(XS)</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/14</h2> | ||
+ | <h3>Electrophoresis for confirmation</h3> | ||
+ | <span class="author">Honda, Li and Yamauchi</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>Lane</th><th>Restriction Enzyme Digestion Products</td></tr> | ||
+ | <tr><td>1</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>2</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>3</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>4</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>5</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>6</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>7</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>8</td><td>9/12 AT-YcPlac 1~8</td></tr> | ||
+ | <tr><td>9</td><td>GeneRuler</td></tr> | ||
+ | <tr><td>10</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | <tr><td>11</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | <tr><td>12</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | <tr><td>13</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | <tr><td>14</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | <tr><td>15</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | <tr><td>16</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | <tr><td>17</td><td>9/12 AT-His-YcPlac 1~8</td></tr> | ||
+ | </table> | ||
+ | <table class="note"> | ||
+ | <tr><th>Lane</th><th>Restriction Enzyme Digestion Products</td></tr> | ||
+ | <tr><td>1</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>2</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>3</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>4</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>5</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>6</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>7</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>8</td><td>9/12 mamB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>9</td><td>GeneRuler</td></tr> | ||
+ | <tr><td>10</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>11</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>12</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>13</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>14</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>15</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>16</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | <tr><td>17</td><td>9/12 DECARB-YcPlac 1~8</td></tr> | ||
+ | </table> | ||
+ | <table class="note"> | ||
+ | <tr><th>Lane</th><th>Restriction Enzyme Digestion Products</td></tr> | ||
+ | <tr><td>1</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>2</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>3</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>4</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>5</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>6</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>7</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>8</td><td>9/12 DECARB 9~16</td></tr> | ||
+ | <tr><td>9</td><td>GeneRuler-YcPlac</td></tr> | ||
+ | <tr><td>10</td><td>9/12 DECARB-YcPlac 17~20</td></tr> | ||
+ | <tr><td>11</td><td>9/12 DECARB-Ycplac 17~20</td></tr> | ||
+ | <tr><td>12</td><td>9/12 DECARB-Ycplac 17~20</td></tr> | ||
+ | <tr><td>13</td><td>9/12 DiDECARB-YcPlac 1~4</td></tr> | ||
+ | <tr><td>14</td><td>9/12 DiDECARB-YcPlac 1~4</td></tr> | ||
+ | <tr><td>15</td><td>9/12 DiDECARB-YcPlac 1~4</td></tr> | ||
+ | <tr><td>16</td><td>9/12 DiDECARB-YcPlac 1~4</td></tr> | ||
+ | <tr><td>17</td><td>9/12 DiDECARB-YcPlac 1~4</td></tr> | ||
+ | </table> | ||
+ | <table class="note"> | ||
+ | <tr><th>Lane</th><th>Restriction Enzyme Digestion Products</td></tr> | ||
+ | <tr><td>1</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>2</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>3</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>4</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>5</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>6</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>7</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>8</td><td>9/12 DiDECARB-YcPlac 5~12</td></tr> | ||
+ | <tr><td>9</td><td>GeneRuler</td></tr> | ||
+ | <tr><td>10</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | <tr><td>11</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | <tr><td>12</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | <tr><td>13</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | <tr><td>14</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | <tr><td>15</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | <tr><td>16</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | <tr><td>17</td><td>9/12 DiDECARB-YcPlac 13~20</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/14</h2> | ||
+ | <h3>Miniprep</h3> | ||
+ | <span class="author">Honda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>DNA</th><th>density(µg/ml)</th><th>260/280</th><th>260/230</th></tr> | ||
+ | <tr><td>9/14 dddD(µ)-pSB1C3</td><td>645</td><td>1.82</td><td>1.70</td></tr> | ||
+ | <tr><td>9/14 dddD(µ)-pSB1C3</td><td>660</td><td>1.69</td><td>1.74</td></tr> | ||
+ | <tr><td>9/14 dddD(µ)-pSB1C3</td><td>635</td><td>1.87</td><td>1.57</td></tr> | ||
+ | <tr><td>9/14 T7-RBS-His-pSB1C3</td><td>440</td><td>1.65</td><td>1.23</td></tr> | ||
+ | <tr><td>9/14 T7-RBS-His-pSB1C3</td><td>450</td><td>1.92</td><td>1.46</td></tr> | ||
+ | <tr><td>9/14 T7-RBS-His-pSB1C3</td><td>190</td><td>1.ss</td><td>1.26</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/14</h2> | ||
+ | <h3>Restriction Enzyme Digestion</h3> | ||
+ | <span class="author">Honda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>Sample</th><th>Volume</th><th>Spe1</th><th>Pst1</th><th>Xba1)</th><th>Buffur</th><th>BSA</th><th>MilliQ</th><th>TOTAL</tr> | ||
+ | <tr><td>9/14 dddD(µ)-pSB1C3</td><td>6</td><td>0</td><td>2</td><td>2</td><td>6(M)</td><td>6</td><td>38</td><td>60</td></tr> | ||
+ | <tr><td>9/14 dddD(µ)-pSB1C3</td><td>6</td><td>0</td><td>2</td><td>2</td><td>6(M)</td><td>6</td><td>38</td><td>60</td></tr> | ||
+ | <tr><td>9/14 dddD(µ)-pSB1C3</td><td>6</td><td>0</td><td>2</td><td>2</td><td>6(M)</td><td>6</td><td>38</td><td>60</td></tr> | ||
+ | <tr><td>9/14 T7-RBS-His-pSB1C3</td><td>5</td><td>1</td><td>1</td><td>0</td><td>3(H)</td><td>0</td><td>18</td><td>30</td></tr> | ||
+ | <tr><td>9/14 T7-RBS-His-pSB1C3</td><td>5</td><td>1</td><td>1</td><td>0</td><td>3(H)</td><td>0</td><td>18</td><td>30</td></tr> | ||
+ | <tr><td>9/14 T7-RBS-His-pSB1C3</td><td>10</td><td>1</td><td>1</td><td>0</td><td>3(H)</td><td>0</td><td>15</td><td>30</td></tr> | ||
+ | </table> | ||
+ | |||
+ | <h2>9/14</h2> | ||
+ | <h3>Ligation</h3> | ||
+ | <span class="author">Yasuda</span> | ||
+ | <table class="note"> | ||
+ | <tr><th>NEB T4DNALigase</th><th>10XLig Buffer</th><th>9/12 DECARB XS column</th><th>9/14 Pcon-pSB1C3 XS Dephosphorylated</th><th>MilliQ</th><th>TOTAL</th></tr> | ||
+ | <tr><td>1</td><td>2</td><td>2.93</td><td>0.83</td><td>13.24</td><td>20</td></tr> | ||
+ | </table> | ||
+ | <table class="note"> | ||
+ | <tr><th>NEB T4DNALigase</th><th>10XLig Buffer</th><th>9/12 DiDECARB XS column</th><th>9/14 Pcon-pSB1C3 XS Dephosphorylated</th><th>MilliQ</th><th>TOTAL</tr> | ||
+ | <tr><td>1</td><td>2</td><td>3.66</td><td>0.83</td><td>12.5</td><td>20</td></tr> | ||
+ | </table> | ||
</table> | </table> | ||
</div> | </div> | ||
</html> | </html> |
Revision as of 14:20, 22 September 2014
count down
edit
アメフラシノート
7/31
Restriction Enzyme Digestion
Sample | Volume | EcoR1 | Spe1 | Buffer(H) | MilliQ | TOTAL |
---|---|---|---|---|---|---|
3/24 PCR(dddD)cloning | 3.2 | 1 | 1 | 3 | 21.8 | 30 |
pSB1C3 | 18.5 | 1 | 1 | 3 | 6.5 | 30 |
pSB1C3(control) | 6.2 | 0 | 0 | 0 | 2.8 | 10 |
8/1
Gel Extraction
Lane | DNA |
---|---|
1 | 1kbp ladder |
2 | 3/24 PCR(dddD)cloning E,S |
3 | 3/24 PCR(dddD)cloning E,S |
4 | Blank |
5 | pSB1C3 |
6 | pSB1C3 |
7 | Blank |
8 | 1kbp ladder |
9 | 3/24 PCR(dddD)cloning(control) |
10 | pSB1C3(control) |
8/1
Ligation
Vector | inserter | 10xt4LigaseBuffer | t4Ligase | MilliQ | TOTAL |
---|---|---|---|---|---|
1.5 µL(8/1 pSB1C3 2047bp 13.3µg/mL 20μg) | 6.9 µL(8/1 dddD 2545bp 10.8µg/mL 74.60µg) | 2µL | 1µL | 8.6µL | 20µL |
8/1
transformation
Name | Sample/(µl) | Competent Cells/(µl) | Total/(µl) | Plate |
---|---|---|---|---|
pSB1C3 | 3 | 30 | 165 | SOC(132µl) |
8/2
PCR Cloning
dddD 121µg/µL | |
---|---|
2x KAPA HiFiHotStartReadyMix | 12.5µL |
F Pre-dddD cloning 62 | 0.75µL |
Rv Spe1-dddDcloning 68 | 0.75µL |
MilliQ | 11µL |
TOTAL | 25µL |
8/2
Colony PCR
Master Mix | |
---|---|
Quick Taq | 15µL |
VF2 | 0.6µL |
VR | 0.6µL |
MilliQ | 13.8µL |
TOTAL | 30µL |
8/2
Restriction Enzyme Digestion
Sample | Volume | EcoR1 | Spe1 | Buffer | MilliQ | TOTAL |
---|---|---|---|---|---|---|
8/2 dddD cloning | 8.2 | 1 | 1 | 3 | 16.8 | 30 |
8/2 dddD cloning control | 0.41 | 0 | 0 | 1 | 8.6 | 10 |
pSB1C3(control) | 6.2 | 0 | 0 | 3(H) | 2.8 | 10 |
8/3
Electrophoresis for confirmation
Lane | Sample |
---|---|
1 | pSB1C3 dddD 1 |
2 | pSB1C3 dddD 2 |
3 | pSB1C3 dddD 3 |
4 | 1kb ladder(3µL) |
5 | 1kb ladder(1µL) |
8/3
Gel Extraction
Lane | DNA |
---|---|
1 | 1kbp ladder |
2 | Blank |
3 | pSB1C3 25µμL 2070bp |
4 | Blank |
5 | pSB1C3 5µL |
6 | Blank |
7 | 8/2 cloning dddD 25µL 2544bp |
8 | Blank |
9 | 3/24 PCR(dddD)cloning(control) |
10 | 8/2 cloning dddD 5µL |
9/14
Gel Extraction
Lane | DNA |
---|---|
1 | 1kbp ladder |
2 | 3/24 PCR(dddD)cloning E,S |
3 | 9/13SAMmT(control) |
4 | 9/13SAMmT(EP) |
5 | 9/13Pcon-pSB1C3(control) |
6 | 9/13Pcon-pSB1C3(XS) |
9/13
Column cleanup
Sample | density(µg/mL) | 260/280 | 260/230 |
---|---|---|---|
9/12 AT-EP | 2.3 | 1.33 | 1.11 |
9/12 AT-His-XP | 2.0 | 1.33 | 0.86 |
9/13
Ligation
sumple | Vector | Insert | Ligase | 2xBuffer | MilliQ |
---|---|---|---|---|---|
9/13 column cleanup AT(EP)+9/8 pSB1C3(EP) | 1 | 3 | 1 | 5 | 0 |
9/13 column cleanup AT-His(XP)+9/13 pSB1C3(XP) | 1 | 3 | 1 | 5 | 0 |
9/13
Miniprep
Sample | density(µg/mL) | 260/280 | 260/230 |
---|---|---|---|
9/12 SAMmt-YCPlac111 | 140 | 1.80 | 1.90 |
9/12 T7-RBS-psB1C3 | 290 | 1.78 | 1.65 |
9/13
Liquid Culture
Sample | Medium |
---|---|
9/12 dddD-pSB1C3 | CP |
9/12 dddD-pSB1C3 | CP |
9/12 dddD-pSB1C3 | CP |
9/12 T7-RBS-His | CP |
9/12 T7-RBS-His | CP |
9/12 T7-RBS-His | CP |
control | CP |
9/14
Colony PCR
Master Mix | |
---|---|
Quick Taq | 335 |
VF | 13.4 |
VR | 13.4 |
MilliQ | 308.2 |
TOTAL | 670 |
9/14
Gel Extraction
Lane | DNA | volume |
---|---|---|
1 | 1kbp ladder | 5 |
2 | 3/24 PCR(dddD)cloning E,S | 15 |
3 | 9/13SAMmT(control) | 15 |
4 | 9/13SAMmT(EP) | 15 |
5 | 9/13Pcon-pSB1C3(control) | 15 |
6 | 9/13Pcon-pSB1C3(XS) |
9/14
Electrophoresis for confirmation
Lane | Restriction Enzyme Digestion Products |
---|---|
1 | 9/12 AT-YcPlac 1~8 |
2 | 9/12 AT-YcPlac 1~8 |
3 | 9/12 AT-YcPlac 1~8 |
4 | 9/12 AT-YcPlac 1~8 |
5 | 9/12 AT-YcPlac 1~8 |
6 | 9/12 AT-YcPlac 1~8 |
7 | 9/12 AT-YcPlac 1~8 |
8 | 9/12 AT-YcPlac 1~8 |
9 | GeneRuler |
10 | 9/12 AT-His-YcPlac 1~8 |
11 | 9/12 AT-His-YcPlac 1~8 |
12 | 9/12 AT-His-YcPlac 1~8 |
13 | 9/12 AT-His-YcPlac 1~8 |
14 | 9/12 AT-His-YcPlac 1~8 |
15 | 9/12 AT-His-YcPlac 1~8 |
16 | 9/12 AT-His-YcPlac 1~8 |
17 | 9/12 AT-His-YcPlac 1~8 |
Lane | Restriction Enzyme Digestion Products |
---|---|
1 | 9/12 mamB-YcPlac 1~8 |
2 | 9/12 mamB-YcPlac 1~8 |
3 | 9/12 mamB-YcPlac 1~8 |
4 | 9/12 mamB-YcPlac 1~8 |
5 | 9/12 mamB-YcPlac 1~8 |
6 | 9/12 mamB-YcPlac 1~8 |
7 | 9/12 mamB-YcPlac 1~8 |
8 | 9/12 mamB-YcPlac 1~8 |
9 | GeneRuler |
10 | 9/12 DECARB-YcPlac 1~8 |
11 | 9/12 DECARB-YcPlac 1~8 |
12 | 9/12 DECARB-YcPlac 1~8 |
13 | 9/12 DECARB-YcPlac 1~8 |
14 | 9/12 DECARB-YcPlac 1~8 |
15 | 9/12 DECARB-YcPlac 1~8 |
16 | 9/12 DECARB-YcPlac 1~8 |
17 | 9/12 DECARB-YcPlac 1~8 |
Lane | Restriction Enzyme Digestion Products |
---|---|
1 | 9/12 DECARB 9~16 |
2 | 9/12 DECARB 9~16 |
3 | 9/12 DECARB 9~16 |
4 | 9/12 DECARB 9~16 |
5 | 9/12 DECARB 9~16 |
6 | 9/12 DECARB 9~16 |
7 | 9/12 DECARB 9~16 |
8 | 9/12 DECARB 9~16 |
9 | GeneRuler-YcPlac |
10 | 9/12 DECARB-YcPlac 17~20 |
11 | 9/12 DECARB-Ycplac 17~20 |
12 | 9/12 DECARB-Ycplac 17~20 |
13 | 9/12 DiDECARB-YcPlac 1~4 |
14 | 9/12 DiDECARB-YcPlac 1~4 |
15 | 9/12 DiDECARB-YcPlac 1~4 |
16 | 9/12 DiDECARB-YcPlac 1~4 |
17 | 9/12 DiDECARB-YcPlac 1~4 |
Lane | Restriction Enzyme Digestion Products |
---|---|
1 | 9/12 DiDECARB-YcPlac 5~12 |
2 | 9/12 DiDECARB-YcPlac 5~12 |
3 | 9/12 DiDECARB-YcPlac 5~12 |
4 | 9/12 DiDECARB-YcPlac 5~12 |
5 | 9/12 DiDECARB-YcPlac 5~12 |
6 | 9/12 DiDECARB-YcPlac 5~12 |
7 | 9/12 DiDECARB-YcPlac 5~12 |
8 | 9/12 DiDECARB-YcPlac 5~12 |
9 | GeneRuler |
10 | 9/12 DiDECARB-YcPlac 13~20 |
11 | 9/12 DiDECARB-YcPlac 13~20 |
12 | 9/12 DiDECARB-YcPlac 13~20 |
13 | 9/12 DiDECARB-YcPlac 13~20 |
14 | 9/12 DiDECARB-YcPlac 13~20 |
15 | 9/12 DiDECARB-YcPlac 13~20 |
16 | 9/12 DiDECARB-YcPlac 13~20 |
17 | 9/12 DiDECARB-YcPlac 13~20 |
9/14
Miniprep
DNA | density(µg/ml) | 260/280 | 260/230 |
---|---|---|---|
9/14 dddD(µ)-pSB1C3 | 645 | 1.82 | 1.70 |
9/14 dddD(µ)-pSB1C3 | 660 | 1.69 | 1.74 |
9/14 dddD(µ)-pSB1C3 | 635 | 1.87 | 1.57 |
9/14 T7-RBS-His-pSB1C3 | 440 | 1.65 | 1.23 |
9/14 T7-RBS-His-pSB1C3 | 450 | 1.92 | 1.46 |
9/14 T7-RBS-His-pSB1C3 | 190 | 1.ss | 1.26 |
9/14
Restriction Enzyme Digestion
Sample | Volume | Spe1 | Pst1 | Xba1) | Buffur | BSA | MilliQ | TOTAL |
---|---|---|---|---|---|---|---|---|
9/14 dddD(µ)-pSB1C3 | 6 | 0 | 2 | 2 | 6(M) | 6 | 38 | 60 |
9/14 dddD(µ)-pSB1C3 | 6 | 0 | 2 | 2 | 6(M) | 6 | 38 | 60 |
9/14 dddD(µ)-pSB1C3 | 6 | 0 | 2 | 2 | 6(M) | 6 | 38 | 60 |
9/14 T7-RBS-His-pSB1C3 | 5 | 1 | 1 | 0 | 3(H) | 0 | 18 | 30 |
9/14 T7-RBS-His-pSB1C3 | 5 | 1 | 1 | 0 | 3(H) | 0 | 18 | 30 |
9/14 T7-RBS-His-pSB1C3 | 10 | 1 | 1 | 0 | 3(H) | 0 | 15 | 30 |
9/14
Ligation
NEB T4DNALigase | 10XLig Buffer | 9/12 DECARB XS column | 9/14 Pcon-pSB1C3 XS Dephosphorylated | MilliQ | TOTAL |
---|---|---|---|---|---|
1 | 2 | 2.93 | 0.83 | 13.24 | 20 |
NEB T4DNALigase | 10XLig Buffer | 9/12 DiDECARB XS column | 9/14 Pcon-pSB1C3 XS Dephosphorylated | MilliQ | TOTAL |
---|---|---|---|---|---|
1 | 2 | 3.66 | 0.83 | 12.5 | 20 |