Team:Cambridge-JIC/Informatics

From 2014.igem.org

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<p>A .xls version of this table with relevant filters can be found <a href="https://static.igem.org/mediawiki/2014/4/42/Marchantia_codon_table_analysis.xls">here</a>.</p>
<p>A .xls version of this table with relevant filters can be found <a href="https://static.igem.org/mediawiki/2014/4/42/Marchantia_codon_table_analysis.xls">here</a>.</p>
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<h2>Informatics</h2>
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<p>To identify potential promoter regions in Marchantia's genome, we looked for gene sequences from other species, mainly <i>Arabidopsis thaliana</i> and <i>Physcomitrella patens</i>. We were particularly interested in genes that were:
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<ul>
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<li>Nitrate inducible</li>
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<li>Sulphate inducible</li>
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<li>Phosphate inducible</li>
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<li>Circadian rythm driven</li>
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<li>Metabolism related</li>
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<li>Development related</li>
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<li>Light responsive</li>
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<li>Development</li>
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<li>Standard templates for proteins</li>
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<li>Standard templates for genes</li>
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</ul>
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</p>
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Revision as of 16:54, 31 July 2014