Team:HokkaidoU Japan/Notebook/Pre experiment/Stem replacement

From 2014.igem.org

(Difference between revisions)
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      </ul>
      </ul>
      <div class="step-recipe">
      <div class="step-recipe">
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pHN1257 stem_F Tm:70.6&#8451;  terminator_R Tm:71.4&#8451; KOD FX NEO
+
pHN1257 stem_F Tm:70.6&#8451;  terminator_R Tm:71.4&#8451;  
 +
</div>
 +
<div class="step-recipe">
 +
KOD FX NEO
</div>
</div>
    </div>
    </div>
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      </ul>
      </ul>
      <div class="step-recipe">
      <div class="step-recipe">
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R0010 on ice 30min each of 5.0µL DNA to DH5α 42&#8451; 1min on ice 2min
+
R0010  
 +
</div>
 +
<div class="step-recipe">
 +
each of 5.0µL DNA to DH5α  
</div>
</div>
    </div>
    </div>
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      </ul>
      </ul>
      <div class="step-recipe">
      <div class="step-recipe">
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Cut R0010 with PstI, SpeI (using 10xH buffer) and pHN1257 with XbaI, PstI (using 10xM buffer)
+
Cut R0010 with PstI, SpeI (using 10xH buffer)  
 +
</div>
 +
<div class="step-recipe">
 +
Cut pHN1257 with XbaI, PstI (using 10xM buffer)
</div>
</div>
    </div>
    </div>
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      </ul>
      </ul>
      <div class="step-recipe">
      <div class="step-recipe">
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Ligation products on ice 30min each of 5.0µL DNA to DH5α 42&#8451; 1min on ice 2min
+
Ligation products  
 +
</div>
 +
<div class="step-recipe">
 +
each of 5.0µL DNA to DH5α
</div>
</div>
    </div>
    </div>
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      </ul>
      </ul>
      <div class="step-recipe">
      <div class="step-recipe">
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R0010-stem-dT 100up_F pHN1257terminator_R
+
R0010-stem-B0015 with 100up_F pHN1257terminator_R
</div>
</div>
    </div>
    </div>
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  <div class="step-tile">
  <div class="step-tile">
  <h2 class="step-title">
  <h2 class="step-title">
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mini-Prep
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Mini-Prep
</h2>
</h2>
  </div>
  </div>
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      </ul>
      </ul>
      <div class="step-recipe">
      <div class="step-recipe">
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R0010-stem-dT
+
R0010-stem-B0015
</div>
</div>
    </div>
    </div>
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      </ul>
      </ul>
      <div class="step-recipe">
      <div class="step-recipe">
-
R0010-stem-dT 100up_F pHN1257terminator_R KOD FX NEO
+
R0010-stem-dT with 100up_F pHN1257terminator_R  
 +
</div>
 +
<div class="step-recipe">
 +
KOD FX NEO
</div>
</div>
    </div>
    </div>

Revision as of 03:41, 18 October 2014

Notebook
Lab Documents

Stem Region Replacement

  • Start

  • PCR

    pHN1257 stem_F Tm:70.6℃ terminator_R Tm:71.4℃
    KOD FX NEO
  • Transformation

    R0010
    each of 5.0µL DNA to DH5α
  • Digestion

    Cut R0010 with PstI, SpeI (using 10xH buffer)
    Cut pHN1257 with XbaI, PstI (using 10xM buffer)
  • Ligation

    Ligate R0010 with pHN1257
  • Transformation

    Ligation products
    each of 5.0µL DNA to DH5α
  • Colony PCR

    R0010-stem-B0015 with 100up_F pHN1257terminator_R
  • Mini-Prep

    R0010-stem-B0015
  • PCR(confirm)

    R0010-stem-dT with 100up_F pHN1257terminator_R
    KOD FX NEO
  • Complete!