Team:HokkaidoU Japan/Projects/Length/Method

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<h1> How to synthesize anti-sense constructs</h1>
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<h1>How to synthesize anti-sense constructs</h1>
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Anti-sense fragments were synthesized based on BioBrick by PCR. Forward primers are common. Each reverse primers are different. Because of these, we got various length anti-senses. The sides of antisense fragment have restriction enzymes XhoI, NcoI sites.  We finished synthesizing anti-sense RNA, we ligated each anti-senses with H-stem vector by restriction enzyme XhoI, NcoI.</p>
Anti-sense fragments were synthesized based on BioBrick by PCR. Forward primers are common. Each reverse primers are different. Because of these, we got various length anti-senses. The sides of antisense fragment have restriction enzymes XhoI, NcoI sites.  We finished synthesizing anti-sense RNA, we ligated each anti-senses with H-stem vector by restriction enzyme XhoI, NcoI.</p>

Revision as of 11:57, 14 October 2014

How to synthesize anti-sense constructs

Anti-sense fragments were synthesized based on BioBrick by PCR. Forward primers are common. Each reverse primers are different. Because of these, we got various length anti-senses. The sides of antisense fragment have restriction enzymes XhoI, NcoI sites. We finished synthesizing anti-sense RNA, we ligated each anti-senses with H-stem vector by restriction enzyme XhoI, NcoI.

Therefore, we got as90, as120. As the same way, we made as30, as60 in H-Stem System and Anti-sense B0034 examination. We performed repression examination by using their 4 anti-sense constructs.

How to assay

We selected mRFP for the target gene. We used fluorophotometer to measure how anti-sense worked. The colonies transformed by anti-sense constructs and target gene was used for assay.

  1. To cultivate the colony in 4 mL LB culture for about 20 hours
  2. To control turbidity up to 0.1 at OD600
  3. To cultivate the colony in 2 mL M9ZB culture for 9 hours (100mM IPTG induces antisense constructs, addition 20 uL)
  4. To measure fluorescence after 9 hour