Team:USTC-China/notebook/bib

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<div class="title"><h1>Bibliography</h1></div>
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<div class="title"><h1>Overview</h1></div>
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<p>1.Pamela J B Brown; Gail G Hardy; Michael J Trimble; Yves V Brun <em>Complex regulatory pathways coordinate cell-cycle progression and development in Caulobacter crescentus.</em>  Advances in microbial physiology. 2009 . 10.1016/s0065-2911(08)00001-5 <br />
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2.Steven Ringquist; Thomas Jones; Eric E Snyder; Terri Gibson; Irina Boni; Larry Gold  <em>High-Affinity RNA Ligands to Escherichia coli Ribosomes and Ribosomal Protein S1: Comparison of Natural and Unnatural Binding Sites</em>  Biochemistry. 1995 . 10.1021/bi00011a019 <br />
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<li>1.Pamela J B Brown; Gail G Hardy; Michael J Trimble; Yves V Brun <em>Complex regulatory pathways coordinate cell-cycle progression and development in Caulobacter crescentus.</em>  Advances in microbial physiology. 2009 . 10.1016/s0065-2911(08)00001-5</li>
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3.Robert Penchovsky <em>Computational design and biosensor applications of small molecule-sensing allosteric ribozymes.</em>  Biomacromolecules. 2013 . 10.1021/bm400299a <br />
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<li>Steven Ringquist; Thomas Jones; Eric E Snyder; Terri Gibson; Irina Boni; Larry Gold  <em>High-Affinity RNA Ligands to Escherichia coli Ribosomes and Ribosomal Protein S1: Comparison of Natural and Unnatural Binding Sites</em>  Biochemistry. 1995 . 10.1021/bi00011a019</li>
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4.Chunbo Lou; Brynne Stanton; Ying-Ja Chen; Brian Munsky; Christopher A Voigt <em>Ribozyme-based insulator parts buffer synthetic circuits from genetic context</em> Nature Biotechnology. 2012 . 10.1038/nbt.2401 <br />
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<li>Robert Penchovsky <em>Computational design and biosensor applications of small molecule-sensing allosteric ribozymes.</em>  Biomacromolecules. 2013 . 10.1021/bm400299a</li>
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5.Tina Glisovic; Jennifer L Bachorik; Jeongsik Yong; Gideon Dreyfuss <em>RNA-binding proteins and post-transcriptional gene regulation</em> FEBS Letters. 2008 . 10.1016/j.febslet.2008.03.004 <br />
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<li>Chunbo Lou; Brynne Stanton; Ying-Ja Chen; Brian Munsky; Christopher A Voigt <em>Ribozyme-based insulator parts buffer synthetic circuits from genetic context</em> Nature Biotechnology. 2012 . 10.1038/nbt.2401</li>
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6.Evan J Olson; Lucas A Hartsough; Brian P Landry; Raghav Shroff; Jeffrey J Tabor <em>Characterizing bacterial gene circuit dynamics with Robert Penchovsky optically programmed gene expression signals</em> Nature Methods. 2014 . 10.1038/nmeth.2884 <br />
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<li>Tina Glisovic; Jennifer L Bachorik; Jeongsik Yong; Gideon Dreyfuss <em>RNA-binding proteins and post-transcriptional gene regulation</em> FEBS Letters. 2008 . 10.1016/j.febslet.2008.03.004</li>
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7.Michael P Robertson; Andrew Ellington <em>In vitro selection of an allosteric ribozyme that transduces analytes <br />
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<li>Evan J Olson; Lucas A Hartsough; Brian P Landry; Raghav Shroff; Jeffrey J Tabor <em>Characterizing bacterial gene circuit dynamics with Robert Penchovsky optically programmed gene expression signals</em> Nature Methods. 2014 . 10.1038/nmeth.2884</li>
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to amplicons</em> Nature Biotechnology. 1999 . 10.1038/5236 <br />
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<li>Michael P Robertson; Andrew Ellington <em>In vitro selection of an allosteric ribozyme that transduces analytes</eli>
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8.Robert Penchovsky <em>Computational design and biosensor applications of small molecule-sensing allosteric ribozymes.</em> Biomacromolecules. 2013 . 10.1021/bm400299a <br />
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<li> amplicons</em> Nature Biotechnology. 1999 . 10.1038/5236</li>
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9.Simon Ausländer; Patrick Ketzer; Jörg S Hartig <em>A ligand-dependent hammerhead ribozyme switch for controlling mammalian gene expression.</em> Molecular bioSystems. 2010 . 10.1039/b923076a <br />
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<li>Robert Penchovsky <em>Computational design and biosensor applications of small molecule-sensing allosteric ribozymes.</em> Biomacromolecules. 2013 . 10.1021/bm400299a</li>
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10. Steven Ringquist; Thomas Jones; Eric E Snyder; Terri Gibson; Irina Boni; Larry Gold <em>High-Affinity RNA Ligands to Escherichia coli Ribosomes and Ribosomal Protein S1: Comparison of Natural and Unnatural Binding Sites</em>  Biochemistry. 1995 . 10.1021/bi00011a019 <br />
+
<li>Simon Ausländer; Patrick Ketzer; Jörg S Hartig <em>A ligand-dependent hammerhead ribozyme switch for controlling mammalian gene expression.</em> Molecular bioSystems. 2010 . 10.1039/b923076a</li>
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11. Dipankar Sen <em>The use of light to investDipankar Sen igate and modulate DNA and RNA conformations</em> Nucleic Acids Symposium Series. 2008 . 10.1093/nass/nrn006 <br />
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<li>Steven Ringquist; Thomas Jones; Eric E Snyder; Terri Gibson; Irina Boni; Larry Gold <em>High-Affinity RNA Ligands to Escherichia coli Ribosomes and Ribosomal Protein S1: Comparison of Natural and Unnatural Binding Sites</em>  Biochemistry. 1995 . 10.1021/bi00011a019</li>
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12. Travis S Bayer; Christina D Smolke <em>Programmable ligand-controlled riboregulators of eukaryotic gene expression</em> Nature Biotechnology. 2005 . 10.1038/nbt1069 <br />
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<li>Dipankar Sen <em>The use of light to investDipankar Sen igate and modulate DNA and RNA conformations</em> Nucleic Acids Symposium Series. 2008 . 10.1093/nass/nrn006</li>
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13. Andreas Möglich; Rebecca A Ayers; Keith Moffat <em>Design and signaling mechanism of light-regulated histidine kinases.</em> Journal of molecular biology. 2009 . 10.1016/j.jmb.2008.12.017 <br />
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<li>Travis S Bayer; Christina D Smolke <em>Programmable ligand-controlled riboregulators of eukaryotic gene expression</em> Nature Biotechnology. 2005 . 10.1038/nbt1069</li>
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14.Aretha Fiebig; Julien Herrou; Coralie Fumeaux; Sunish K Radhakrishnan; Patrick H Viollier; Sean Crosson <em>A Cell Cycle and Nutritional Checkpoint <br />
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<li>Andreas Möglich; Rebecca A Ayers; Keith Moffat <em>Design and signaling mechanism of light-regulated histidine kinases.</em> Journal of molecular biology. 2009 . 10.1016/j.jmb.2008.12.017</li>
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Controlling Bacterial Surface Adhesion</em> PLoS Genetics. 2014 . 10.1371/journal.pgen.1004101
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<li>Aretha Fiebig; Julien Herrou; Coralie Fumeaux; Sunish K Radhakrishnan; Patrick H Viollier; Sean Crosson <em>A Cell Cycle and Nutritional Checkpoint</li>
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15. Matthias Christen; Beat Christen; Martin G Allan; Marc Folcher; Paul Jenö; Stephan Grzesiek; Urs Jenal <em>DgrA is a member of a new family of cyclic diguanosine monophosphate receptors and controls flagellar motor function in Caulobacter crescentus.</em> Proceedings of the National Academy of Sciences. 2007 . 10.1073/pnas.0607738104 <br />
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<p>ontrolling Bacterial Surface Adhesion</em> PLoS Genetics. 2014 . 10.1371/journal.pgen.1004101
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16.Fang Teng; Barbara E Murray; George M Weinstock <em>Conjugal Transfer of Plasmid DNA fromEscherichia colito Enterococci: A Method to Make Insertion Mutations</em> Plasmid. 1998 . 10.1006/plas.1998.1336 <br />
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15. Matthias Christen; Beat Christen; Martin G Allan; Marc Folcher; Paul Jenö; Stephan Grzesiek; Urs Jenal <em>DgrA is a member of a new family of cyclic diguanosine monophosphate receptors and controls flagellar motor function in Caulobacter crescentus.</em> Proceedings of the National Academy of Sciences. 2007 . 10.1073/pnas.0607738104</p>
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17. Jeffrey J Tabor; Anselm Levskaya; Christopher A Voigt <em>Multichromatic Control of Gene Expression in Escherichia coli</em> Journal of Molecular Biology. 2011 . 10.1016/j.jmb.2010.10.038</p>
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<li>Fang Teng; Barbara E Murray; George M Weinstock <em>Conjugal Transfer of Plasmid DNA fromEscherichia colito Enterococci: A Method to Make Insertion Mutations</em> Plasmid. 1998 . 10.1006/plas.1998.1336</li>
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<li>Jeffrey J Tabor; Anselm Levskaya; Christopher A Voigt <em>Multichromatic Control of Gene Expression in Escherichia coli</em> Journal of Molecular Biology. 2011 . 10.1016/j.jmb.2010.10.038</li>
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Revision as of 04:48, 14 October 2014

Overview

  • 1.Pamela J B Brown; Gail G Hardy; Michael J Trimble; Yves V Brun Complex regulatory pathways coordinate cell-cycle progression and development in Caulobacter crescentus. Advances in microbial physiology. 2009 . 10.1016/s0065-2911(08)00001-5
  • Steven Ringquist; Thomas Jones; Eric E Snyder; Terri Gibson; Irina Boni; Larry Gold High-Affinity RNA Ligands to Escherichia coli Ribosomes and Ribosomal Protein S1: Comparison of Natural and Unnatural Binding Sites Biochemistry. 1995 . 10.1021/bi00011a019
  • Robert Penchovsky Computational design and biosensor applications of small molecule-sensing allosteric ribozymes. Biomacromolecules. 2013 . 10.1021/bm400299a
  • Chunbo Lou; Brynne Stanton; Ying-Ja Chen; Brian Munsky; Christopher A Voigt Ribozyme-based insulator parts buffer synthetic circuits from genetic context Nature Biotechnology. 2012 . 10.1038/nbt.2401
  • Tina Glisovic; Jennifer L Bachorik; Jeongsik Yong; Gideon Dreyfuss RNA-binding proteins and post-transcriptional gene regulation FEBS Letters. 2008 . 10.1016/j.febslet.2008.03.004
  • Evan J Olson; Lucas A Hartsough; Brian P Landry; Raghav Shroff; Jeffrey J Tabor Characterizing bacterial gene circuit dynamics with Robert Penchovsky optically programmed gene expression signals Nature Methods. 2014 . 10.1038/nmeth.2884
  • Michael P Robertson; Andrew Ellington In vitro selection of an allosteric ribozyme that transduces analytes
  • amplicons Nature Biotechnology. 1999 . 10.1038/5236
  • Robert Penchovsky Computational design and biosensor applications of small molecule-sensing allosteric ribozymes. Biomacromolecules. 2013 . 10.1021/bm400299a
  • Simon Ausländer; Patrick Ketzer; Jörg S Hartig A ligand-dependent hammerhead ribozyme switch for controlling mammalian gene expression. Molecular bioSystems. 2010 . 10.1039/b923076a
  • Steven Ringquist; Thomas Jones; Eric E Snyder; Terri Gibson; Irina Boni; Larry Gold High-Affinity RNA Ligands to Escherichia coli Ribosomes and Ribosomal Protein S1: Comparison of Natural and Unnatural Binding Sites Biochemistry. 1995 . 10.1021/bi00011a019
  • Dipankar Sen The use of light to investDipankar Sen igate and modulate DNA and RNA conformations Nucleic Acids Symposium Series. 2008 . 10.1093/nass/nrn006
  • Travis S Bayer; Christina D Smolke Programmable ligand-controlled riboregulators of eukaryotic gene expression Nature Biotechnology. 2005 . 10.1038/nbt1069
  • Andreas Möglich; Rebecca A Ayers; Keith Moffat Design and signaling mechanism of light-regulated histidine kinases. Journal of molecular biology. 2009 . 10.1016/j.jmb.2008.12.017
  • Aretha Fiebig; Julien Herrou; Coralie Fumeaux; Sunish K Radhakrishnan; Patrick H Viollier; Sean Crosson A Cell Cycle and Nutritional Checkpoint

    • ontrolling Bacterial Surface Adhesion PLoS Genetics. 2014 . 10.1371/journal.pgen.1004101 15. Matthias Christen; Beat Christen; Martin G Allan; Marc Folcher; Paul Jenö; Stephan Grzesiek; Urs Jenal DgrA is a member of a new family of cyclic diguanosine monophosphate receptors and controls flagellar motor function in Caulobacter crescentus. Proceedings of the National Academy of Sciences. 2007 . 10.1073/pnas.0607738104

  • Fang Teng; Barbara E Murray; George M Weinstock Conjugal Transfer of Plasmid DNA fromEscherichia colito Enterococci: A Method to Make Insertion Mutations Plasmid. 1998 . 10.1006/plas.1998.1336
  • Jeffrey J Tabor; Anselm Levskaya; Christopher A Voigt Multichromatic Control of Gene Expression in Escherichia coli Journal of Molecular Biology. 2011 . 10.1016/j.jmb.2010.10.038

    • Lots of thanks to our sponsors, who help us to achieve what we have today

    © 2014 USTC-iGEM Design. Distributed under BY-SA 3.0

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