Team:Aalto-Helsinki/Journal

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Revision as of 10:07, 30 September 2014

Journal

We made sure we documented everything important. The summer was full of different experiences and a lot of hard work. You can browse through our work flow here.

There and Back Again
an iGEM team's tale by Aalto-Helsinki

We worked hard but it all paid off. We had fun, we made new friends. We did something new, we learned something new. It was an amazing journey.

We also have more details to share, if you have the interest to read it all (pdf files inc)!

A Scientist discovers that which exists; an Engineer creates that which never was. Theodore von Karmen

Safety

How to lab.

And what's in our lab. Also the safety form will be here.

Timeline

  • October 2014
  • Jamboree bootcamp at Mikkeli Summer cottage

    25.10.2014

    Perfecting everything and admiring our wiki which is totally done at this point. All's well, we can just relax before the Jamboree.

  • September 2014
  • August 2014
  • Testing DNA-constructs!

    28.8.2014

    Testing the first DNA-constructs.

  • Bowling

    26.8.2014

    We plan to go to an escape the room thing, but when all the suitable times are booked, Minttu takes us bowling instead.

  • Art of the nights and more pinball

    21.8.2014, 22.8.2014

    We go visit the observatorium during the Night of the Arts event in Helsinki. There's also massive soap bubbles and a man with a whole band setup in a baby carriage.

    The next day we go back to playing pinball and Crash Team Racing because it was so much fun last week.

  • Testing starts!

    19.8.2014

    We build the first part of the prototype and start testing!

  • Our synthetized genes arrive!

    18.8.2014

    After a long while, our genes finally arrive. Now we can take them and other parts we've assembled and the whole genetically engineered machine together.

  • Meeting at Heureka Science Center!

    18.8.2014

    We meet the event manager and event organizer of Heureka and come up with a synthetic biology weekend workshop we could organize in Spring.

    They were very excited about us and everything we had to show and tell. They said that this is a perfect match from them and all the simulations, games, pictures fit perfectly into the workshop.

    We hope to inspire young people to study synthetic biology in the future and let the older people know it exists. This will also be a perfect opportunity for the next year's iGEM Team to get involved and organize something together.

  • Pinball night!

    14.8.2014

    Lassi takes us to play pinball. It's surprisingly fun. We also play a ton of Crash Team Racing.

  • HYBER takes interest in us!

    8.8.2014

    We meet with The Academy of Finland's Center of Excellence HYBER 2014-2019. They want us to talk in their conference and support us.

    In the evening Oskari takes us to play laser tag! He is way better than anyone else.

  • First sequencing results arrive!

    5.8.2014

    We get our first sequencing results that in confusing .ab1-files. Then it turns out that Geneious makes analysing them incredibly easy. Most of the sequences look good, some not so much.

  • Friday Sushi Lunch!

    1.8.2014

    Instead of staying in our HQ and eating in the cafeteria next to it, Laura takes us to eat fancy sushi. It's delicious and fun.

    Img of sushi.

  • July 2014
  • Building the synthesizable sequences

    31.7.2014

    We build the sequences to synthetize from scratch. They include the OR lambda repressor sites we designed. The synthetisizing is the same price for 0-1000 nucleotides, so we include a few surrounding BioBricks to save on lab time.

  • First ligations sent to sequencing

    28.7.2014

    We have a number of ligations ready for assembling and it turns out there's a sequencing place like 5 kilometers away.

    We seal 16 samples into tubes and send them off. We are left eagerly waiting to see if the work this far has succeeded.

  • Meeting with Tania!

    22.7.2014

    We meet Tania, an ex-iGEMer from the one 2012 Amsterdam team. It's a great meeting and we finally get some validation that we're doing some things right.

    In the evening Martina takes us geocaching! It is pretty exiting.

  • Demo Day

    15.7.2014

    We present our idea to hundreds of people and hold a booth for 6 hours.

  • The gene circuit is finished!

    14.7.2014

    We have the lambda repressor figured out and integrated into our system. We start planning for the parts to be synthesized.

    In the evening Mikko takes us to watch The Skin I Live In, Scott Pilgrim vs. The World and The Grand Budapest Hotel.

  • Summer of Startups Tallinn trip!

    10-11.7.2014

    Summer of Startups takes us to visit the Startup people of Tallinn. We decide this is a practice trip for Boston, so we planned to have as much fun as possible. It was a great success.

  • Extensive research on the lambda repressor!

    8.7.2014

    We find out that the lambda repressor system would be perfect for our three-way switch idea. We figure out how it works and how to include it in our gene circuit.

  • The "Fun master"-system begins!

    4.7.2014

    We decided that we should do something fun every week as a group that has nothing to do with iGEM. Every team member has their own week. Starting now.

    So Otto surprised us with a fruit juicer and a ton of fresh fruit. We spent the early morning happily drinking smoothies.

  • The first team member chimera

    2.7.2014

    Because chimera is a term in gene techonology and mythology, Laura decided that drawing a chimera for each member based on the animals they choose would be a cool idea.

    We agreed. Here's Otto.

  • Brian is born

    1.7.2014, 2.7.2014

    We get the idea of explaining synthetic biology as turning bacteria into superheroes from a meeting with ???. We start working on a new pitch based on that.

    Pietu finishes the pitch the next day and presents it at Summer of Startups. It seems to go over very well. People finally understand what we are doing.

  • June 2014
  • BioBrick Seeker on the iGEM help-page and Community-page

    25.6.2014

    It has been on the help page for a while. We only noticed it now.

    We also wrote a thing for the Community page and got them featured on there.

  • First BioBrick ligation combo working!

    24.6.2014

    We even checked it with a gel

    Gel picture:

  • Writing sponsorship applications

    10.6.2014

    Also new pictures. Like a new group photo.

  • Trouble in the lab

    8.6.2014

    The backbones don't seem to be working right and the negative control keeps growing.

  • BioBrick Seeker spreading.

    2.6.2014

    Tons of mentions on Twitter. People seem to like it a lot.

    Try it out!

  • May 2014
  • Precipitation of the cell membranes!

    30.5.2014

    This process would be repeated about 50 times during the summer, but this was the first. Video link: http://www.youtube.com/watch?v=TI_EuzNIaPg.

  • First version of BioBrick Seeker!

    30.5.2014

    It started from the mild inconvenience of searching for BioBricks in the lab. It ended being used on 5 continents.

  • First BioBrick transformation in Finland!

    26.5.2014

    Cooool.

  • Website is done!

    23.5.2014

    Check it out! This time it does actually look cool!

  • Lab kicks off!

    20.5.2014

    ...by making plates. Not that mind-blowing, but very important.

  • We get a tour of the lab

    19.5.2014

    We get one desk and there's still someone else's stuff on it, but it's ours and we are going to do amazing things there.

  • The iGEM 2014 Distribution Kit arrives

    9.5.2014

    The competition starts to feel like a real thing.

  • April 2014
  • Getting ready for Summer of Startups

    22.4.2014, 25.4.2014, 28.4.2014

    We meet a few times to go over what we will say to the Summer of Startups panel, so that they will accept us to the program.

    This culminates on the 28th, when we have the interview. Our team leader tries to attend through Skype, but the panel doesn't like it. We manage to pull through anyway and the panel is very excited about us at the end.

    We get in.

  • Expert Meeting at Aalto University

    10.4.2014

    We presented ourselves and our initial ideas to a panel of experts, mostly researchers from VTT and some from the Viikki biocampus.

    They received us very well and there was a lot of interesting discussion. We also noticed that we can pretty cool things as a group.

  • Meeting with Markus at Helsinki Think Company

    10.4.2014

    We presented our initial ideas to our advisor, Markus, in preparation for the expert meet. We discussed what direction to go and what kind of idea to pick.

  • March 2014
  • Making an Introduction Video

    30.3.2014

    We made an introduction video of us so we could apply to Summer of Startups. It turned out pretty good! Video link: http://www.youtube.com/watch?v=LJX21WthZQg.

  • Hackaton

    23.3.2014

    The first version of our website was built. We wanted it to look cool. It didn't.

  • Throwing ideas

    18.3.2014, 25.3.2014

    Some brainstorming. Wild ideas. Rating the ideas. Post-it gradient.

    Image of the post-it Gradient.
  • The First Meeting

    14.3.2014

    The first team meeting was held on a Friday afternoon. Some of us met each other for the first time ever, some had met before already. We talked about the project and got to know each other.

  • Picking the team

    5.3.2014 - 12.3.2014

    Oskari is in the first job interview in his life, as the interviewer. He holds 19 more interviews during the week. Nine are chosen to be in the final team.

  • The Beginning
  • Meetings Aalto University and University of Helsinki

    31.1.2014, 5.2.2014

    It seems like the universities are into the idea.

  • The idea of a Finnish iGEM team forms.

    28.8.2013

    First e-mails are sent