Team:Cambridge-JIC/Constructs/gal4 hap1gr H2RBmRFP
From 2014.igem.org
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<b> Some error in the digestion protocol is likely to have occurred. </b> | <b> Some error in the digestion protocol is likely to have occurred. </b> | ||
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- | To insert a promoter, a digest with Kpn1 was performed. Gel was illegible, although a faint band at 13kb may have been visible. | + | To insert a promoter, a digest with Kpn1 was performed. Gel was illegible, although a faint band at 13kb may have been visible. No extraction was made due to poor quality of the gel. |
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- | </ul> Grew up in LB 8 more colonies. Attempted colony PCR using inoculation loop in dry PCR tube | + | </ul> |
- | + | Grew up in LB 8 more colonies. Attempted colony PCR using inoculation loop in dry PCR tube - will wait to see results from GEL. Expect an 8kb fragment: unlikely that this will show results. Will perform a SalI digest with correct protocol on 31/07 following miniprep from colonies. | |
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Latest revision as of 16:10, 30 July 2014
Gal4 - Hap1GR - H2BmRFP
Design
Aim of the construct
- We'll try out 35s->GAL4->HAP1GR->H2BmRFP.
- Since H2BmRFP has not been tried in Mp, we'll also try 35s->H2BmRFP. A positive control for lab technique will be 35s->Venus N7
- We'll also use FF's original plasmid to try 35s-Hap1GR-mRFP, as a control for the Hap1GR. I expect low transformation rate as in the original plasmid, we're using 35s as promoter for HygR selection marker.
- Not sure whether 35s->Gal4 has been tried (check with BP), so 35s-Gal4-venus n7 is doable with BP's construct as a control
- As another control, we'll try 35s-Gal4-H2mRFP
End goal plasmid
Experimentation (up to date)
PCR
Attempt 1:- Start date/time: 24/07, 11:08
- End date/time:24/07, 1550
- UIDs of primers/plasmids used:
- A1, P33, P34
- A1, P35, P36
- A2, P37, P38
- A2, P39, P40
- PCR Spreadsheet (on google drive)
- Gel 27/07/2014
Gibson
Attempt 1:- Start date/time: 25/07
- Comments: seemed to be fine.
E-Coli transformation
Attempt 1:- Start date/time: 25/07
- Comments:
Selection
Attempt 1:- Start date/time: 28/07
- Comments:
Some error in the digestion protocol is likely to have occurred.
To insert a promoter, a digest with Kpn1 was performed. Gel was illegible, although a faint band at 13kb may have been visible. No extraction was made due to poor quality of the gel. Attempt 2:
- Start date/time: 30/07
- Comments:
Agrobacteria transformation
Attempt 1:- Start date/time:
- End date/time:
- Induce comments:
- Growth comments:
- Electroporation/selection comments:
Spore preparation
Attempt 1:- Start date/time:
- End date/time:
- Comments:
Spore transformation
Attempt 1:- Start date/time:
- End date/time:
- Comments:
Evaluation
- Start date/time:
- End date/time:
- Comments: