Team:Wageningen UR/notebook/journal/model

From 2014.igem.org

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All the necessary scripts for running the Genomic-Scale Metabolic Model "System Cost" can be found <a href="https://static.igem.org/mediawiki/2014/5/50/Wageningen_UR_Scripts_for_System_Cost.zip" target="blank" class="soft_link">here</a>.
All the necessary scripts for running the Genomic-Scale Metabolic Model "System Cost" can be found <a href="https://static.igem.org/mediawiki/2014/5/50/Wageningen_UR_Scripts_for_System_Cost.zip" target="blank" class="soft_link">here</a>.
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All the necessary scripts for running the Dynamic Model "Promoter Design" and "System Performance" can be found <a href="https://static.igem.org/mediawiki/2014/9/97/Wageningen_UR_modeling_Python_Code.zip" target="blank" class="soft_link">here</a>.
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<dt id="02w12"><a>Week 4</a></dt>
<dt id="02w12"><a>Week 4</a></dt>
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<p>The Toxin/anti-Toxin part of BananaGuard is added to the model. A literature research has been performed to find all the remaining unknown fungal growth inhibitor production rates. The new extended model is tested and improved to run the simulations faster. Also multiple carbon sources is now possible and it is possible to change the oxygen uptake rate.</p>
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<p>The Toxin/anti-Toxin part of BananaGuard is added to the model. A literature research has been performed to find all the remaining unknown fungal growth inhibitor production rates. The new extended model is tested and improved to run the simulations faster. Also multiple carbon sources are now possible and it is possible to change the oxygen uptake rate.</p>
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Latest revision as of 01:52, 18 October 2014

Wageningen UR iGEM 2014

 

 

Modelers journal


All the included pathways and metabolites used in the metabolic model can be found here.

All the necessary scripts for running the Genomic-Scale Metabolic Model "System Cost" can be found here.

All the necessary scripts for running the Dynamic Model "Promoter Design" and "System Performance" can be found here.


June

Week 4

July

Week 1
Week 2
Week 3

August

Week 1-4

September

Week 1
Week 2
Week 3
Week 4

October

Week 1
Week 2