Team:UT-Dallas/temp

From 2014.igem.org

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<section id="titlechart"></html>{{Header_menu}}<html><div class="page_content"><br><h2>Parts</H2><p style="display:block">
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<h2><a href="https://2014.igem.org/Team:UT-Dallas">UT Dallas iGEM</h2>
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<br><img src="https://static.igem.org/mediawiki/2014/4/48/GRNA_Library.png" width="1024px">
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<li><a href="#">Project</a>
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<li><a href="#">History</a></li>
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<li><a href="#">Modeling</a></li>
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<li><a href="#">Method</a></li>
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<li><a href="#">Results</a></li>
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<li><a href="#">Parts&nbsp;&nbsp;&nbsp;</a></li>
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<li><a href="#">Team</a></li>
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<li><a href="#">Attributions</a></li>
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<li><a href="#">Safety</a></li>
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<div id="project_desc"><br><h2>PROJECT</H2><p>
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Treating infectious diseases of the gastrointestinal (GI) tract with antibiotics disrupts a patient's gut microbiota and can increase the prevalence of antibiotic resistant strains. The increasing population of multi-drug resistant bacterial strains, both within and outside of health centers, is a growing health concern that is becoming progressively difficult to treat. Additionally, it is a well-recognized fact within the global health community that traditional antibiotics do not represent a sustainable method of treatment for bacterial infections. There is a clear drive towards minimally invasive, prophylactic therapies for such ailments, but is a demand that so far, has not been adequately met. Our project will aim at replacing broad and narrow spectrum antibiotics with “precision therapies” that have etiology targeting capacity at the species level as well as contain minimal cross-talk among healthy tissues, organs, and symbiotic organisms.
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<div id="parallax1" class="spacer s2" style="background-image: url(https://static.igem.org/mediawiki/2014/1/19/UTD_Lab.jpg);"></div>
<div id="parallax1" class="spacer s2" style="background-image: url(https://static.igem.org/mediawiki/2014/1/19/UTD_Lab.jpg);"></div>
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<br><h2>THE TEAM</H2><br><p>
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<br><h2>Parts List</H2><br><p style="display:block">
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<table id="team_table">
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<td style="border:1px solid black;">Name</td>
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  <img src="https://static.igem.org/mediawiki/2014/1/13/Tyler-profile-image.png" height="400px" width="400px" class="tooltip" title="<h2 class='info_h2'>Tyler</h2>This is my div's tooltip message!">
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<td style="border:1px solid black;">Type</td>
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</td>
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<td style="border:1px solid black;">Description</td>
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<td style="border:1px solid black;">Length</td>
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  <img src="https://static.igem.org/mediawiki/2014/3/34/Sam-profile-image.png" height="400px" width="400px" class="tooltip" title="<h2 class='info_h2'>Samantha</h2>Hello! My name is Samantha and I recently graduated from UTD with a BSc in Biology. I am interested in synthetic biology because it offers very unique and dynamic solutions to complicated problems. I joined iGEM because it's an excellent platform for creative collaboration among young scientists. When I am not in the lab... it's probably because I just left to get more coffee and am on my way back to the lab.">
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</td>
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<td id="pad_td">  
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487021"> BBa_K1487021</a> </td>
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  <img src="https://static.igem.org/mediawiki/2014/5/56/Megan-profile-image.png" height="400px" width="400px" class="tooltip" title="<h2 class='info_h2'>Megan Zerez</h2>Megan Zerez is a molecular biology sophomore (or junior, she’s not entirely sure) at UT Dallas. She enjoys getting used books in the mail, building things and being a food snob. She has a pet ukulele and a tendency to not attend lecture. She does not do voice modulation and likes to talk about all of these things maybe a bit too loudly, much to the chagrin of our neighbors at NSERL. In addition to wet-lab work, Megan worked on the wiki and human practices project.">
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-acfA gRNA</td><td style="border:1px solid black;">145</td>
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</td>
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<tr colspan=3>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487022"> BBa_K1487022</a> </td>
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<td><br></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-acfB gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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</tr>
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<tr>
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<tr>
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<td>  
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487023"> BBa_K1487023</a></td>
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  <img src="https://static.igem.org/mediawiki/2014/8/8b/Tra-profile-image.png" height="400px" width="400px" class="tooltip" title="<h2 class='info_h2'>Tra</h2>Tra is biology major but she is still deciding between Molecular Cell Biology and Mathematics. Nevertheless, she loves both. Since she is good at math, she does the biological system modelling for our project, despite having any prior programming experience. She learned gro and MatLab just for iGEM. Aside from wet lab work, she also helps with building the wiki. Tra loves languages. She is learning Japanese, Russian, http, and css. When there is dead time in the lab you will find her occasionally engaging in conversations on the topic of Math as a language with our labs post-doc. In between reactions, if she is not utilizing time by cleaning the lab bench, Tra would do calligraphy on the white board. Tra is an iGEM late-comer but she soon became an essential part of the team.  
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-acfC gRNA</td><td style="border:1px solid black;">145</td>
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<br><br>The song ‘Tra's Brief Life as a Spider’ on Spotify reveals her life prior to iGEM. Tra was briefly reincarnated as a spider, then later, as a Wild Horse on the planet of nearly, where wild horses hold the majority in the senate. She likes pudding, but only without raisins.  
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<br><br>When not doing iGEM wet lab and dry lab work, Tra enjoys swing dancing, sacrificing bishops (in chess club), setting ants on fire with isopropanol, and slashing people with sabre (in fencing club). Tra occasionally bring borscht, mooncakes, and cashew butter to the lab.
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<br><br>Tra is at the same time engaging in a math research. She is looking to further the application of math in the study of biology.">
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487024"> BBa_K1487024</a></td>
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</td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-acfD gRNA</td><td style="border:1px solid black;">145</td>
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<td id="pad_td">  
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</tr>
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  <img src="https://static.igem.org/mediawiki/2014/8/80/Rishika-profile-image.png" height="400px" width="400px" class="tooltip" title="<h2 class='info_h2'>Rishika</h2>I’m a sophomore majoring in Molecular Biology. I’m an avid Netflixer and love ice cream, napping, windy days, Chipotle, and going to airports (in that order). In lab I can most likely be found in front of the centrifuges at the Miniprep station or in front of the whiteboard admiring the lovely tables and diagrams. iGEM has been a great opportunity where I learned tons about everything ranging from the CRISPR-Cas9 system to ‘crunchy bread,’ and had a lot of fun while doing so.">
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<tr>
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</td>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487025"> BBa_K1487025</a></td>
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<td id="pad_td">
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-ctxA gRNA</td><td style="border:1px solid black;">145</td>
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  <img src="https://static.igem.org/mediawiki/2014/e/e7/Kortne-profile-image.png" height="400px" width="400px" class="tooltip" title="<h2 class='info_h2'>Kortne</h2>Hello, my name is Kortne Banks and I am a senior studying biology at The University of Texas at Dallas. When I am not busy studying for exams I love to spend my free time tutoring children and writing. I am currently writing a children’s book that aims towards inspiring children to pursue their dreams. A goal of mine is to one day start a nonprofit organization that helps children excel in stem careers. What prompted me to participate in Igem was my amazement on how much power the students have over choosing a project for the jamboree competition. I initially had zero bacterial cloning experience and now I am a cloning machine. I also learned a few web design techniques using html for our team wiki page. Igem has been an amazing opportunity for me and there is no doubt that this summer has been an unforgettable experience.   ">
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487026"> BBa_K1487026</a></td>
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</table>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-ctxB gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487027"> BBa_K1487027</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpA gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487028"> BBa_K1487028</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpB gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487029"> BBa_K1487029</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpC gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487030"> BBa_K1487030</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpD gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487031"> BBa_K1487031</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpE gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487032"> BBa_K1487032</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpF gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487033"> BBa_K1487033</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpH gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487034"> BBa_K1487034</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpI gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487035"> BBa_K1487035</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpJ gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487036"> BBa_K1487036</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpP gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487037"> BBa_K1487037</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpQ gRNA</td><td style="border:1px solid black;">143</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487038"> BBa_K1487038</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpR gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487039"> BBa_K1487039</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpS gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487040"> BBa_K1487040</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-tcpT gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487041"> BBa_K1487041</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P-toxT gRNA</td><td style="border:1px solid black;">145</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487063"> BBa_K1487063</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(acfA) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487064"> BBa_K1487064</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(acfB) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487065"> BBa_K1487065</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(acfC) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487066"> BBa_K1487066</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(acfD) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487067"> BBa_K1487067</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(ctxA) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
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<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487068"> BBa_K1487068</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(ctxB) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
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<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487069"> BBa_K1487069</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpA) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487070"> BBa_K1487070</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpB) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487071"> BBa_K1487071</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpC) - YFP</td><td style="border:1px solid black;">807</td>
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</tr>
 +
<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487072"> BBa_K1487072</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpD) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487073"> BBa_K1487073</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpE) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487074"> BBa_K1487074</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpF) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487075"> BBa_K1487075</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpH) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487076"> BBa_K1487076</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpI) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487077"> BBa_K1487077</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpJ) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487078"> BBa_K1487078</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpP) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487079"> BBa_K1487079</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpQ) - YFP</td><td style="border:1px solid black;">805</td>
 +
</tr>
 +
<tr>
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<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487080"> BBa_K1487080</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpR) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487081"> BBa_K1487081</a></td>
 +
<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpS) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487082"> BBa_K1487082</a></td>
 +
<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(tcpT) - YFP</td><td style="border:1px solid black;">807</td>
 +
</tr>
 +
<tr>
 +
<td style="border:1px solid black;"><a href="http://parts.igem.org/Part:BBa_K1487083"> BBa_K1487083</a></td>
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<td style="border:1px solid black;">Composite</td><td style="border:1px solid black;">P + t.seq(toxT) - YFP</td><td style="border:1px solid black;">807</td>
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Latest revision as of 03:48, 18 October 2014


Parts





Parts List


Name Type Description Length
BBa_K1487021 CompositeP-acfA gRNA145
BBa_K1487022 CompositeP-acfB gRNA145
BBa_K1487023 CompositeP-acfC gRNA145
BBa_K1487024 CompositeP-acfD gRNA145
BBa_K1487025 CompositeP-ctxA gRNA145
BBa_K1487026 CompositeP-ctxB gRNA145
BBa_K1487027 CompositeP-tcpA gRNA145
BBa_K1487028 CompositeP-tcpB gRNA145
BBa_K1487029 CompositeP-tcpC gRNA145
BBa_K1487030 CompositeP-tcpD gRNA145
BBa_K1487031 CompositeP-tcpE gRNA145
BBa_K1487032 CompositeP-tcpF gRNA145
BBa_K1487033 CompositeP-tcpH gRNA145
BBa_K1487034 CompositeP-tcpI gRNA145
BBa_K1487035 CompositeP-tcpJ gRNA145
BBa_K1487036 CompositeP-tcpP gRNA145
BBa_K1487037 CompositeP-tcpQ gRNA143
BBa_K1487038 CompositeP-tcpR gRNA145
BBa_K1487039 CompositeP-tcpS gRNA145
BBa_K1487040 CompositeP-tcpT gRNA145
BBa_K1487041 CompositeP-toxT gRNA145
BBa_K1487063 CompositeP + t.seq(acfA) - YFP807
BBa_K1487064 CompositeP + t.seq(acfB) - YFP807
BBa_K1487065 CompositeP + t.seq(acfC) - YFP807
BBa_K1487066 CompositeP + t.seq(acfD) - YFP807
BBa_K1487067 CompositeP + t.seq(ctxA) - YFP807
BBa_K1487068 CompositeP + t.seq(ctxB) - YFP807
BBa_K1487069 CompositeP + t.seq(tcpA) - YFP807
BBa_K1487070 CompositeP + t.seq(tcpB) - YFP807
BBa_K1487071 CompositeP + t.seq(tcpC) - YFP807
BBa_K1487072 CompositeP + t.seq(tcpD) - YFP807
BBa_K1487073 CompositeP + t.seq(tcpE) - YFP807
BBa_K1487074 CompositeP + t.seq(tcpF) - YFP807
BBa_K1487075 CompositeP + t.seq(tcpH) - YFP807
BBa_K1487076 CompositeP + t.seq(tcpI) - YFP807
BBa_K1487077 CompositeP + t.seq(tcpJ) - YFP807
BBa_K1487078 CompositeP + t.seq(tcpP) - YFP807
BBa_K1487079 CompositeP + t.seq(tcpQ) - YFP805
BBa_K1487080 CompositeP + t.seq(tcpR) - YFP807
BBa_K1487081 CompositeP + t.seq(tcpS) - YFP807
BBa_K1487082 CompositeP + t.seq(tcpT) - YFP807
BBa_K1487083 CompositeP + t.seq(toxT) - YFP807



Retrieved from "http://2014.igem.org/Team:UT-Dallas/temp"