Team:BGU Israel/Project/Aspiration Shift

From 2014.igem.org

(Difference between revisions)
 
(3 intermediate revisions not shown)
Line 8: Line 8:
        
        
        
        
-
         <div class="col3" style="height: 200px;">
+
         <div class="col3" style="height: 205px;">
         <h3 style="border-bottom:dashed;border-color:#000000">Background            <a href="#" onclick="goToByScroll('background'); return false;" class="right"></a></h3>
         <h3 style="border-bottom:dashed;border-color:#000000">Background            <a href="#" onclick="goToByScroll('background'); return false;" class="right"></a></h3>
         <br>
         <br>
Line 15: Line 15:
         <b>Goal: </b>Increase fatty acid oxidation, lipid transport and mitochondrial biogenesis processes, while limiting the state of insulin resistance
         <b>Goal: </b>Increase fatty acid oxidation, lipid transport and mitochondrial biogenesis processes, while limiting the state of insulin resistance
         </div>
         </div>
-
         <div class="col3" style="height:200px;">
+
         <div class="col3" style="height:205px;">
         <h3 style="border-bottom:dashed;border-color:#000000">Mechanism  <a href="#" onclick="goToByScroll('test'); return false;" class="right"></a></h3>
         <h3 style="border-bottom:dashed;border-color:#000000">Mechanism  <a href="#" onclick="goToByScroll('test'); return false;" class="right"></a></h3>
         <br>
         <br>
Line 21: Line 21:
         </div>
         </div>
-
         <div class="col3" style="height:200px; margin-right:0px;">
+
         <div class="col3" style="height:205px; margin-right:0px;">
-
         <h3 style="border-bottom:dashed;border-color:#000000">Modeling </h3>
+
         <h3 style="border-bottom:dashed;border-color:#000000">Modeling  
 +
<a href="https://2014.igem.org/Team:BGU_Israel/Modeling/Aspiration_Shift" class="right"></a></h3>
         <br>
         <br>
Line 35: Line 36:
           </div>
           </div>
           <div id="background" style="height:100px"></div>
           <div id="background" style="height:100px"></div>
-
       <div class="textCont" style="height: 330px;">
+
       <div class="textCont" style="height: 490px;">
       <h3 style="border-bottom:dashed;border-color:#000000">Background </h3>
       <h3 style="border-bottom:dashed;border-color:#000000">Background </h3>
         <div class="col2">
         <div class="col2">
-
        <br>
+
   
-
One of most serious effects of unbalanced fat metabolism is an abnormal accumulation of fatty acids in non-adipose tissues, particularly skeletal muscles and liver. This effect is strongly associated with insulin resistance and obesity. One of the key members, which can reduce abnormal fat accumulation, is peroxisome proliferator-activated receptor γ (PPARγ), a member of the nuclear hormone receptor family of ligand-activated transcription factors.  
+
<p align="center"><img src="https://static.igem.org/mediawiki/2014/3/31/BGU14_ANI_FATCELL.png" height="240"></p>
 +
 
 +
One of the most serious effects of unbalanced fat metabolism is an abnormal accumulation of fatty acids in non-adipose tissues, particularly skeletal muscles and liver. This effect is strongly associated with insulin resistance and obesity. One of the key members, which can reduce abnormal fat accumulation, is peroxisome proliferator-activated receptor γ (PPARγ), a member of the nuclear hormone receptor family of ligand-activated transcription factors.  
          
          
Line 51: Line 54:
         </div>
         </div>
          
          
 +
<div id="test" style="position:relative; bottom:70px"></div>
         <div class="textCont" style="height: 570px; margin-bottom: 12px;">
         <div class="textCont" style="height: 570px; margin-bottom: 12px;">
       <h3 style="border-bottom:dashed;border-color:#000000">Mechanism </h3>
       <h3 style="border-bottom:dashed;border-color:#000000">Mechanism </h3>

Latest revision as of 23:54, 17 October 2014

Background


The problem: Abnormal accumulation of fatty acids in non-adipose tissues, particularly skeletal muscles and liver
Goal: Increase fatty acid oxidation, lipid transport and mitochondrial biogenesis processes, while limiting the state of insulin resistance

Mechanism


Activation of PPARγ by modest overexpression of PGC-1α

Modeling


We designed a mathematical model of our ‘Aspiration Shift’ mechanism, and analyzed the treatment effects on the dynamic system of the genetic circuit.

Background

One of the most serious effects of unbalanced fat metabolism is an abnormal accumulation of fatty acids in non-adipose tissues, particularly skeletal muscles and liver. This effect is strongly associated with insulin resistance and obesity. One of the key members, which can reduce abnormal fat accumulation, is peroxisome proliferator-activated receptor γ (PPARγ), a member of the nuclear hormone receptor family of ligand-activated transcription factors.

Activation of this receptor increases the expression of genes important to fatty acid oxidation, lipid transport and mitochondrial biogenesis processes(Aharoni-simon, Hann-obercyger, Pen, Madar, & Tirosh, 2011). In vivo induction of the PPARγ co-activator 1α (PGC-1α) showed a high level of fatty acid oxidation capacity. However, overexpression of PGC-1α also induced insulin resistance(Benton, Holloway, Han, & Yoshida, 2010).

Mechanism


In order to prevent the state of insulin resistance, we designed a self-regulating mechanism, to limit overexpression of PGC-1α, as shown in figure 1. The mechanism is based on the sterol regulatory elements (SRE) to control PGC-1α expression. When cell is found in an anabolic state, i.e., accumulating fatty acids, a transcription factor called SREBP (Sterol Regulatory Element-Binding Proteins) is expressed(Shimomura, Bashmakov, & Horton, 1999). The SREBP binds the sterol regulatory elements and induces the expression of PGC-1α. Thus, to control PGC-1α overexpression, a PPARγ sensitive promoter controlling the expression of a repressor, which binds to an operator downstream the sterol regulatory elements, was added to the system. This way, PGC-1α inhibits its own overexpression and remains in a modest physiological level; a level which does not lead to insulin resistance.



Click on the picture to check out the machanism

A construct with PGC1-α under the regulation of sterol regulatory element (SRE), is introduced into the liver cell.

References

Aharoni-simon, M., Hann-obercyger, M., Pen, S., Madar, Z., & Tirosh, O. (2011). Fatty liver is associated with impaired activity of PPAR g -coactivator 1 a ( PGC1 a ) and mitochondrial biogenesis in mice, 91(July), 1018–1028. doi:10.1038/labinvest.2011.55


Benton, C. R., Holloway, G. P., Han, X., & Yoshida, Y. (2010). Increased levels of peroxisome proliferator-activated receptor gamma , coactivator 1 alpha ( PGC-1 α ) improve lipid utilisation , insulin signalling and glucose transport in skeletal muscle of lean and insulin-resistant obese Zucker rats, 2008–2019. doi:10.1007/s00125-010-1773-1


Shimomura, I., Bashmakov, Y., & Horton, J. D. (1999). Increased Levels of Nuclear SREBP-1c Associated with Fatty Livers in Two Mouse Models of Diabetes Mellitus. Journal of Biological Chemistry, 274(42), 30028–30032. doi:10.1074/jbc.274.42.30028