Team:KAIT Japan/Notebook
From 2014.igem.org
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- | =='''<font size="6">Creating parts of | + | =='''<font size="6">Creating parts of GFP and HlyA</font>'''== |
:<big>'''Date:8/22'''</big> The refinement of DNA and PCR and Electrophoresis | :<big>'''Date:8/22'''</big> The refinement of DNA and PCR and Electrophoresis | ||
:<big>'''Date:8/25'''</big> PCR and Electrophoresis and Restriction | :<big>'''Date:8/25'''</big> PCR and Electrophoresis and Restriction | ||
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:<big>'''Date:9/1'''</big> Build replica the HlyA and GFP | :<big>'''Date:9/1'''</big> Build replica the HlyA and GFP | ||
:<big>'''Date:9/1'''</big> Restriction enzyme treatment the HlyA and GFP | :<big>'''Date:9/1'''</big> Restriction enzyme treatment the HlyA and GFP | ||
- | :<big>'''Date:9/2'''</big> Restriction enzyme treatment the HlyA and GFP in 9/1 | + | :<big>'''Date:9/2'''</big> Restriction enzyme treatment the HlyA and GFP in 9/1 was NANOSEP |
:<big>'''Date:9/3'''</big> Ligation and PCR, DNA purification the HlyA and GFP | :<big>'''Date:9/3'''</big> Ligation and PCR, DNA purification the HlyA and GFP | ||
:<big>'''Date:9/4'''</big> Restriction enzyme treatment the HlyA and GFP | :<big>'''Date:9/4'''</big> Restriction enzyme treatment the HlyA and GFP | ||
:<big>'''Date:9/5'''</big> Restriction enzyme treatment the vector | :<big>'''Date:9/5'''</big> Restriction enzyme treatment the vector | ||
:<big>'''Date:9/5'''</big> Ligation the vector and insert. So transformation. | :<big>'''Date:9/5'''</big> Ligation the vector and insert. So transformation. | ||
- | :<big>'''Date:9/9'''</big> Check the HiyA and GFP replica.Ligation and | + | :<big>'''Date:9/9'''</big> Check the HiyA and GFP replica.Ligation and transformation the vector and insert DNA. |
:<big>'''Date:9/10'''</big> Transformation in 9/9 check the colony PCR.TA cloning the HlyA+GFP. | :<big>'''Date:9/10'''</big> Transformation in 9/9 check the colony PCR.TA cloning the HlyA+GFP. | ||
:<big>'''Date:9/11'''</big> Ligation the vector and insert DNA. | :<big>'''Date:9/11'''</big> Ligation the vector and insert DNA. | ||
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:<big>'''Date:9/17'''</big> PCR the DNA abstracted for iGEM kit.It was TA cloning and restriction enzyme treatment. | :<big>'''Date:9/17'''</big> PCR the DNA abstracted for iGEM kit.It was TA cloning and restriction enzyme treatment. | ||
:<big>'''Date:9/18'''</big> Ligation the GFP and HlyA. | :<big>'''Date:9/18'''</big> Ligation the GFP and HlyA. | ||
- | :<big>'''Date:9/19'''</big> | + | :<big>'''Date:9/19'''</big> Electrophoresis the ligation the GFP+HlyA in 9/18 |
- | :<big>'''Date:9/20'''</big> | + | :<big>'''Date:9/20'''</big> DNA purify and PCR |
- | :<big>'''Date:9/21'''</big> | + | :<big>'''Date:9/21'''</big> PCR and DNA purify |
- | :<big>'''Date:9/22'''</big> | + | :<big>'''Date:9/22'''</big> Ligation the GFP+HlyA |
- | :<big>'''Date:9/23'''</big> | + | :<big>'''Date:9/23'''</big> PCR and DNA purify |
- | :<big>'''Date:9/24'''</big> | + | :<big>'''Date:9/24'''</big> TA Cloning was GFP and HlyA |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/26'''</big> Restriction enzyme treatment the ligation the GFP+HlyA in 9/22 |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/27'''</big> Check the TA cloning of GFP+HlyA |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/29'''</big> Restriction enzyme treatment the GFP+HlyA and the pSBIC3 |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/29'''</big> The vector and the insert were NANOSEP and lectrophoresis |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/30'''</big> The vector and the insert were ligation and transformation |
- | :<big>'''Date:9/30'''</big> | + | :<big>'''Date:9/30'''</big> The GFP+HlyA was PCR and DNA purify |
- | :<big>'''Date:10/1'''</big> | + | :<big>'''Date:10/1'''</big> Electrophoresis the GFP+HlyA was PCR and DNA purify in 9/30 |
- | :<big>'''Date:10/2'''</big> | + | :<big>'''Date:10/2'''</big> Restriction enzyme treatment and ligation the GFP+HlyA |
- | :<big>'''Date:10/3'''</big> | + | :<big>'''Date:10/3'''</big> Check the ligation in 10/2 |
- | :<big>'''Date:10/ | + | :<big>'''Date:10/3'''</big> Transformation the plasmid |
- | :<big>'''Date:10/5'''</big> | + | :<big>'''Date:10/5'''</big> Colony PCR |
- | :<big>'''Date:10/6'''</big> | + | :<big>'''Date:10/6'''</big> Miniprep and Electrophoresis |
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:<big>'''Date:8/25'''</big> PCR and Electrophoresis(Changed to Taq HOTSTER from EX taq.) | :<big>'''Date:8/25'''</big> PCR and Electrophoresis(Changed to Taq HOTSTER from EX taq.) | ||
:<big>'''Date:8/26'''</big> PCR and Electrophoresis(Using a mutation primer.) | :<big>'''Date:8/26'''</big> PCR and Electrophoresis(Using a mutation primer.) | ||
- | :<big>'''Date:8/27'''</big> First Variation introduction (with Prime STAR Max) | + | :<big>'''Date:8/27'''</big> First Variation introduction (with Prime STAR Max) |
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:<big>'''Date:9/2'''</big> PCR and Electrophoresis | :<big>'''Date:9/2'''</big> PCR and Electrophoresis | ||
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:<big>'''Date:9/5~9/8'''</big> PCR and Electrophoresis | :<big>'''Date:9/5~9/8'''</big> PCR and Electrophoresis | ||
:<big>'''Date:9/9'''</big> Sequence(to To confirm whether variation happened in DNA of STAT3 ) | :<big>'''Date:9/9'''</big> Sequence(to To confirm whether variation happened in DNA of STAT3 ) | ||
:<big>'''Date:9/10~9/12'''</big> PCR and Electrophoresis | :<big>'''Date:9/10~9/12'''</big> PCR and Electrophoresis | ||
- | :<big>'''Date:9/13 | + | :<big>'''Date:9/13~9/15'''</big> DNA purification and electrophoresis |
- | + | :<big>'''Date:9/16~9/17'''</big> DNA purification and colony PCR(Failure) | |
- | + | :<big>'''Date:9/18'''</big> colony PCR(Failure) | |
- | :<big>'''Date:9/16 | + | :<big>'''Date:9/19~9/22'''</big> colony PCR and electrophoresis |
- | + | :<big>'''Date:9/23'''</big> PCR and Electrophoresis(We found out that DNA polymerase was malfunction) | |
- | :<big>'''Date:9/18'''</big> | + | :<big>'''Date:9/24'''</big> PCR and Electrophoresis and DNA DNA purification |
- | :<big>'''Date:9/19 | + | :<big>'''Date:9/25'''</big> PCR(to find annealing temperature) |
- | + | :<big>'''Date:9/26~9/30'''</big> DNA purification and electrophoresis(to use DNA for the sequence) | |
- | + | :<big>'''Date:10/1'''</big> Dilution after Concentration measurement of DNA | |
- | + | :<big>'''Date:10/2'''</big> Sequence(to check mutation of DNA)/The variation was not found. | |
- | :<big>'''Date:9/23'''</big> | + | :<big>'''Date:10/4'''</big> PCR and electrophoresis |
- | :<big>'''Date:9/24'''</big> | + | :<big>'''Date:10/5~10/7'''</big> Colony PCR and DNA purification |
- | :<big>'''Date:9/25'''</big> | + | :<big>'''Date:10/8'''</big> Concentration measurement of DNA |
- | :<big>'''Date:9/26 | + | :<big>'''Date:10/9'''</big> Sequence(to check mutation of DNA)/The variation was not found |
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- | :<big>'''Date:10/1'''</big> | + | |
- | :<big>'''Date:10/2'''</big> | + | |
- | :<big>'''Date:10/ | + | |
- | :<big>'''Date:10/ | + | |
- | :<big>'''Date:10/ | + | |
- | :<big>'''Date:10/ | + | |
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:<big>'''Date:8/26'''</big> PCR and Electrophoresis(Using a mutation primer.) | :<big>'''Date:8/26'''</big> PCR and Electrophoresis(Using a mutation primer.) | ||
:<big>'''Date:8/27'''</big> First Variation introduction (with Prime STAR Max) | :<big>'''Date:8/27'''</big> First Variation introduction (with Prime STAR Max) | ||
- | :<big>'''Date:9/ | + | :<big>'''Date:9/2'''</big> PCR |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/4'''</big> Transformation |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/5'''</big> Colony PCR |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/7'''</big> ColonyPCR |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/8'''</big> DNA extraction and Sequence(to To confirm whether variation happened in DNA of IL-10β) |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/9'''</big> DNA sequence |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/10'''</big> PCR and Electtrophoresis |
- | :<big>'''Date:9/ | + | :<big>'''Date:9/11'''</big> Colony PCR |
- | :<big>'''Date:9/9'''</big> | + | :<big>'''Date:9/12'''</big> DNA extraction |
- | :<big>'''Date:9/10-10/9'''</big> | + | :<big>'''Date:9/13'''</big> PCR and Electrophoresis |
+ | :<big>'''Date:9/15'''</big> ultrafiltration | ||
+ | :<big>'''Date:9/16'''</big> DNA sequence(to comfirm whether variation happened in DNA of IL-10β) | ||
+ | :<big>'''Date:9/20'''</big> PCR | ||
+ | :<big>'''Date:9/23'''</big> Colony PCR | ||
+ | :<big>'''Date:9/24'''</big> Electrophoresis | ||
+ | :<big>'''Date:9/26'''</big> ultrafiltration | ||
+ | :<big>'''Date:9/27'''</big> PCR and colony PCR | ||
+ | :<big>'''Date:9/29'''</big> Electrophoresis | ||
+ | :<big>'''Date:9/30'''</big> DNA Extraction | ||
+ | :<big>'''Date:10/1'''</big> Colony PCR and DNA extraction | ||
+ | :<big>'''Date:10/2'''</big> Electrophoresis | ||
+ | :<big>'''Date:10/3'''</big> PCR(using Prime Star MAX Premix) and Electrophoresis | ||
+ | :<big>'''Date:10/4'''</big> PCR(using Prime Star MAX Premix) and Electrophoresis | ||
+ | :<big>'''Date:10/5'''</big> Electrophoresis | ||
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+ | <br> | ||
+ | <br> | ||
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+ | =='''<font size="6">Creating parts of HRV,IL-5Ra,IL-5Rb,AraC,Arac Promoter</font>'''== | ||
+ | :<big>'''Date:9/16'''</big> PCR:Ara,AraPro,HRV Transformation:IL-5Ra,IL-5Rb | ||
+ | :<big>'''Date:9/17'''</big> Restriction enzyme treatment and insert to TA vector and transformation | ||
+ | :<big>'''Date:9/18'''</big> transformation | ||
+ | :<big>'''Date:9/19'''</big> miniprep and colony PCR | ||
+ | :<big>'''Date:9/20~9/22'''</big> PCR | ||
+ | :<big>'''Date:9/23'''</big> TA Cloning | ||
+ | :<big>'''Date:9/24'''</big> TA Cloning and PCR | ||
+ | :<big>'''Date:9/25'''</big> Restriction enzyme treatment and PCR | ||
+ | :<big>'''Date:9/26'''</big> Colony PCR and Ligation | ||
+ | :<big>'''Date:9/27'''</big> TA Cloning and Ligation and colony PCR | ||
+ | :<big>'''Date:9/28'''</big> PCR | ||
+ | :<big>'''Date:9/29'''</big> colony PCR and PCR and DNA refinement and Ligation | ||
+ | :<big>'''Date:9/30'''</big> DNA refinement and Ligation | ||
+ | :<big>'''Date:10/1'''</big> Restriction enzyme treatment and Ligation | ||
+ | :<big>'''Date:10/2'''</big> PCR and Ligation and DNA refinement | ||
+ | :<big>'''Date:10/3'''</big> Ligation | ||
+ | :<big>'''Date:10/4'''</big> Ligation | ||
+ | :<big>'''Date:10/7'''</big> PCR | ||
+ | :<big>'''Date:10/8'''</big> PCR and Restriction enzyme | ||
+ | :<big>'''Date:10/9'''</big> DNA refinement and Restriction enzyme | ||
+ | :<big>'''Date:10/10'''</big> Phoshatase treatment | ||
+ | :<big>'''Date:10/11'''</big> DNA refinement and Ligation and Restriction enzyme treatment | ||
+ | :<big>'''Date:10/12'''</big> DNA refinement and PCR and Ligation and phoshatase treatment | ||
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Latest revision as of 09:44, 17 October 2014
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Notebook
Creating parts of GFP and HlyA
Creating parts of STAT3
Creating parts of IL-10α,IL-10β
Creating parts of HRV,IL-5Ra,IL-5Rb,AraC,Arac Promoter
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