|
|
| (14 intermediate revisions not shown) |
| Line 1: |
Line 1: |
| - | {{CSS/Main}}
| |
| | <html> | | <html> |
| - | <style>
| |
| - | #contentSub, #footer-box, #catlinks, #search-controls, #p-logo, .printfooter, .firstHeading,.visualClear {display: none;} /*-- hides default wiki settings --*/
| |
| - | </style>
| |
| | | | |
| | <!-- here ends the section that changes the default wiki template to a white full width background --> | | <!-- here ends the section that changes the default wiki template to a white full width background --> |
| Line 32: |
Line 28: |
| | | | |
| | <td width="162px" align="center" onMouseOver="this.bgColor='#FEE5AD'" onMouseOut="this.bgColor='#A1DBB2'" bgColor=#A1DBB2> | | <td width="162px" align="center" onMouseOver="this.bgColor='#FEE5AD'" onMouseOut="this.bgColor='#A1DBB2'" bgColor=#A1DBB2> |
| - | <a href="http://parts.igem.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2014&group=Nagahama" style="text-decoration:none;color:#1C140D"> | + | <a href="https://2014.igem.org/Team:Nagahama_Parts" style="text-decoration:none;color:#1C140D"> |
| - | METHOD ＆ MATERIAL
| + | Parts |
| | </a> | | </a> |
| | </td> | | </td> |
| Line 44: |
Line 40: |
| | | | |
| | <td width="162px" align="center" onMouseOver="this.bgColor='#FEE5AD'" onMouseOut="this.bgColor='#A1DBB2'" bgColor=#A1DBB2> | | <td width="162px" align="center" onMouseOver="this.bgColor='#FEE5AD'" onMouseOut="this.bgColor='#A1DBB2'" bgColor=#A1DBB2> |
| - | <a href="https://2014.igem.org/Team:Nagahama_H.P." style="text-decoration:none;color:#1C140D"> | + | <a href="https://2014.igem.org/Team:Nagahama_Policy_&_Practice" style="text-decoration:none;color:#1C140D"> |
| - | H.P.
| + | Policy & Practice |
| | </a> | | </a> |
| | </td> | | </td> |
| Line 76: |
Line 72: |
| | | | |
| | | | |
| - | <p><a href="http://parts.igem.org/Part:BBa_K1342001">BBa_K1342001</a></p>
| + | |
| - | <p><a href="http://parts.igem.org/Part:BBa_K1342002">BBa_K1342002</a></p>
| + | |
| - | <p><a href="http://parts.igem.org/Part:BBa_K1342003">BBa_K1342003</a></p>
| + | |
| - | <p><a href="http://parts.igem.org/Part:BBa_K1342004">BBa_K1342004</a></p>
| + | |
| - | <p><a href="http://parts.igem.org/Part:BBa_K1342005">BBa_K1342005</a></p>
| + | |
| | | | |
| - | <br>
| |
| - | <br>
| |
| | | | |
| - | ==='''Method'''===
| |
| - | <br>
| |
| - | '''Aspartate synthesis'''
| |
| - | <br>
| |
| - |
| |
| - | E.coli K12 transformed with CdP-R.B.S-AspA-d.Ter (BBa_K1342001) previous cultured with cadmium in LB medium (250μM) in 37℃ for 12hr at 120rpm. Adjust Cell mass (OD1.0) and therefor centrifuged 4000rpm for 20 min. Cell pellets ware activated in synthesis medium in 37℃ for 2hr at 120rpm/min.
| |
| | | | |
| - |
| |
| - |
| |
| - | TLC
| |
| - | <br>
| |
| - | ・Developer
| |
| - | <br>
| |
| - | Ethyl acetate: pyridine: water: acetic acid＝162：21：11：6
| |
| - | <br>
| |
| - | Reagent
| |
| - |
| |
| - | 7mg/mL 5-(Dimethylamino) naphthalene-1-sulfonyl Chloride (in Acetone); (DNS)
| |
| - | <br>
| |
| - | 1.Sample: DNS =1: 1
| |
| - | <br>
| |
| - | 2.Incubate RT ＞30min
| |
| - | <br>
| |
| - | 3.Spot 2μL
| |
| - | <br>
| |
| - | 4.Development
| |
| - | <br>
| |
| - | 5.UV irradiation (365nm)
| |
| - | <br>
| |
| - | '''SDS PAGE'''
| |
| - | <br>
| |
| - | ・Preculture E.coli holding a plasmid containing a target gene or nomal E.coli.
| |
| - | <br>
| |
| - | ・Measure OD600 0.6-1.0
| |
| - | <br>
| |
| - | ・the expression of fusion protein by isopropylthio-β-D-galactoside (IPTG) and Cd2+ soln.
| |
| - | <br>
| |
| - | ・Transfer a sample a 200 µl in a microcentrifuge tube
| |
| - | <br>
| |
| - | ・Centrifuge at 13,000rpm for a minute at 4℃
| |
| - | <br>
| |
| - | ・Discard supernatant quantitative
| |
| - | <br>
| |
| - | ・Store pellet at -20 °C
| |
| - | <br>
| |
| - | ・Thaw pellet and resupend in Sample Buffer (100 µL 1xSample Buffer per samples)
| |
| - | <br>
| |
| - | ・Heat for 5 minutes at 98 °C
| |
| - | <br>
| |
| - | ・Centrifuge at 13,000rpm for 10 minutes at 4℃
| |
| - | <br>
| |
| - | ・Transfer supernatant to a new microcentrifuge tube
| |
| - | <br>
| |
| - | ・Analyze samples by SDS-PAGE.(Use 20 µL per samples)
| |
| - | <br>
| |
| - |
| |
| - |
| |
| - |
| |
| - | <font size=5>Chemotaxis Assay Using Capillary</font>
| |
| - |
| |
| - | <font size=3>Chemotaxis of a bacterium such as E.coli is assayed by measuring the number of organisms attracted into a capillary tube containing an attractant.</font>
| |
| - |
| |
| - | <font size=4>Protocol</font>
| |
| - | <font size=3>
| |
| - |
| |
| - | Preculture JM109 using tripton broth (Incubate 50rpm/min 30℃ 12hr) Check motility under the microscope.Diluting the E.coli culture 100 times. (tripton broth:E.coli culture＝20mL:200㎕)Incubate 50rpm/min 30℃ (until log phase)500㎕ into two tubes.Centrifuge two tubes in low speed. (25℃ 10min in 3400G)Throw away the clear top of liquid.Add wash medium(500㎕)Resuspending pellets softlyDo 5~9 againAdd chemotaxis medium(500㎕)Resuspending pellets softly.Check motility under the microscope.E.coli chemotaxis medium into chamber preparation(100㎕)Prepare the positive and negative control capillary.（1㎕ of 10mM aspartate chemotaxis medium and chemotaxis medium into capillary.）Two capillary into chamber preparation.90mim 30℃ incubationDilute the chemotaxis buffer in capillary`s liquid 100 times.Prating to LBmedium.37℃ 12h incubation.Counting the colony.Finish
| |
| - | </font>
| |
| - |
| |
| - | </a>
| |
| | </html> | | </html> |
| | + | <groupparts>iGEM014 Nagahama</groupparts> |
"
