Team:UFMG Brazil

From 2014.igem.org

(Difference between revisions)
 
(42 intermediate revisions not shown)
Line 1: Line 1:
-
{{UFMG Brazil/gheader}}
+
{{UFMG_Brazil/css}}
-
<html>
+
{{Danzi_Kesh_8_css}}
-
<div id="wrapper1">
+
<html class=" desktop landscape" lang="en">
-
<div id="welcome" class="container">
+
 
-
<div class="title">
+
<head>
-
<h5>Welcome to our wiki</h5>
+
    <meta http-equiv="content-type" content="text/html; charset=UTF-8">
-
<span class="byline">How to stop a war before it started?</span> </div>
+
    <title>Home UFMG Team</title>
-
<div class="content">
+
    <meta charset="utf-8">
-
<p>Colorectal cancer includes tumors affecting a segment of the large intestine (colon) and rectum. It is treatable and, in most cases, curable when detected early, before it hasn't spread to other organs. However, the diagnosis requires a biopsy, made ​​by handset introduced via rectum. Noticeably, this procedure is highly invasive and often inhibits patients to submit to this practice, hampering the discovery of cancer at an early stage and thereby reducing the chances of effective treatment and cure. On our institution, a modified probiotic strain of Saccharomyces cerevisiae was isolated from local beverage. Our objective is to introduce this strain as a new probiotic chassis on iGEM, and also to develop a gene circuit that allows it to detect one or more stool biomarkers for colorectal cancer on the intestine and report with a color change on the feces. We chose L-DNA (long DNA molecules) as biomarker, and designed a chimeric protein using TALE DNA-Binding Domains and a split version of mCherry. This protein can detect certain repetitive sequences on DNA and emit red fluorescence, which when measured serve as proxy for the DNA size. Since RFP emission falls on the visible spectrum, it can also be used for staining the feces, allowing for a patient consuming the probiotic to become aware of the possibility of the developing problem just by checking on the color of their stool. </p>
+
    <meta name="format-detection" content="telephone=no">
-
<a href="#" class="button">Know More</a> </div>
+
    <link rel="icon" href="images/favicon.ico" type="image/x-icon">
-
</div>
+
    <link rel="stylesheet" href="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/grid.css&action=raw&ctype=text/css">
-
<div id="wrapper3">
+
    <link rel="stylesheet" href="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/style.css&action=raw&ctype=text/css">
-
<div id="portfolio" class="container">
+
    <link rel="stylesheet" href="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/font-awesome.css&action=raw&ctype=text/css" >   
-
<div class="title">
+
    <link rel="stylesheet" href="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/owl.carousel.css&action=raw&ctype=text/css" >
-
<h5>Team</h5></div>
+
    <!--[if lt IE 9]>
-
<div class="column1">
+
        <div style=' clear: both; text-align:center; position: relative;'>
-
<div class="box"><img src="https://static.igem.org/mediawiki/2014/4/41/Liza.jpg" alt="" class="image image-full" />
+
            <a href="http://windows.microsoft.com/en-US/internet-explorer/products/ie/home?ocid=ie6_countdown_bannercode">
-
<h6>Liza Felicori</h6>
+
            <img src="http://storage.ie6countdown.com/assets/100/images/banners/warning_bar_0000_us.jpg" border="0" height="42" width="820" alt="You are using an outdated browser. For a faster, safer browsing experience, upgrade for free today." />
-
<p></p>
+
            </a>
-
<a href="#" class="button button-small">Know More</a> </div>
+
        </div>
-
</div>
+
        <script src="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/html5shiv.js&action=raw&ctype=text/javascript"></script>
-
<div class="column2">
+
        <link rel="stylesheet" type="text/css" media="screen" href="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/ie.css&action=raw&ctype=text/css">
-
<div class="box"><img src="https://static.igem.org/mediawiki/2014/a/a1/Rafa1.jpg" alt="" class="image image-full" />
+
    <![endif]-->
-
<h6>Rafaela</h6>
+
    <script>
-
<p></p>
+
      document.getElementById('top-section').style.height = '10px';
-
<a href="#" class="button button-small">Know More</a> </div>
+
      var left_menu = document.querySelectorAll(".left-menu");
-
</div>
+
      for (var i = 0, length = left_menu.length; i < length; i++) {
-
<div class="column3">
+
        left_menu[i].style.display = 'none';
-
<div class="box"><img src="https://static.igem.org/mediawiki/2014/3/35/Clara.jpg" alt="" class="image image-full" />
+
      }
-
<h6>Clara Guerra</h6>
+
      var right_menu = document.querySelectorAll(".right-menu");
-
<p></p>
+
      for (var i = 0, length = right_menu.length; i < length; i++) {
-
<a href="#" class="button button-small">Know More</a> </div>
+
        right_menu[i].style.display = 'none';
-
</div>
+
      }
-
<div class="column4">
+
    </script>
-
<div class="box"><img src="https://static.igem.org/mediawiki/2014/9/93/Rodrigo.jpg" alt="" class="image image-full" />
+
</head>
-
<h6>Rodrigo</h6>
+
 
-
<p></p>
+
<body id="top" class="main_page">
-
<a href="#" class="button button-small">Know More</a> </div>
+
 
-
</div>
+
    <!--========================================================
-
</div>
+
                            HEADER
-
</div>
+
    =========================================================-->
 +
<header id="header" class="header">
 +
    <div class="banner">
 +
      <div id="stuck_container">
 +
          <nav>
 +
              <div class="container">
 +
                  <div class="row">
 +
                      <div class="grid_12">
 +
                            <ul class="sf-menu">
 +
                                <li class="current"><a href="https://2014.igem.org/Team:UFMG_Brazil">Home</a></li>
 +
                                <li><a href="https://2014.igem.org/Team:UFMG_Brazil/Team">Team</a></li>
 +
                                <li><a href="https://2014.igem.org/Team:UFMG_Brazil/Safety">Safety</a></li>
 +
                                <li><a href="#">Project</a>
 +
                                    <ul style="display:none;">
 +
                                        <li><a href="https://2014.igem.org/Team:UFMG Brazil/Project/Intro">Introduction</a></li>
 +
                                        <li><a href="https://2014.igem.org/Team:UFMG_Brazil/Project/Parts">Parts</a></li>
 +
                                        <li><a href="https://2014.igem.org/Team:UFMG_Brazil/Project/Protocols">Protocols and results</a></li>
 +
                                        <li><a href="https://2014.igem.org/Team:UFMG_Brazil/Project/Modelling">Modelling</a></li>
 +
                                        <li><a href="https://2014.igem.org/Team:UFMG_Brazil/Project/Policy">Policy and practices</a></li>
 +
                                        <li><a href="https://2014.igem.org/Team:UFMG_Brazil/Project/Notebook">Notebook</a></li>
 +
                                    </ul>
 +
                                </li>
 +
                                <li><a href="#">Thanks to</a>
 +
                                    <ul style="display:none;">
 +
                                      <li>
 +
                                        <a href="https://2014.igem.org/Team:UFMG_Brazil/sponsors">Sponsors</a>
 +
                                      </li>
 +
                                      <li>
 +
                                        <a href="https://2014.igem.org/Team:UFMG_Brazil/attributions">Attributions</a>
 +
                                      </li>
 +
                                    </ul>
 +
                                </li>
 +
                                <li>
 +
                                  <div>
 +
                                    <div style="padding-top:5px; display:inline-block;"><a href="https://igem.org/"><img id="igemmenulogo" src="https://static.igem.org/mediawiki/2014/6/60/Igemlogo_300px.png" alt=""></a></div>
 +
                                    <div style="padding-top:24px; display:inline-block;"><a href="#"><img id="topmenutoggle" src="https://static.igem.org/mediawiki/2014/5/5b/Onoff.png" alt="" style="cursor:pointer"></a></div>
 +
                                  </div>
 +
                                </li>
 +
                            </ul>
 +
                        </div>
 +
                  </div>
 +
              </div>
 +
          </nav>
 +
      </div>
 +
      <div class="container">
 +
          <div class="row">
 +
              <div class="grid_12">
 +
                    <div class="unit" style="padding-top:20px; padding-bottom: 20px;">
 +
                      <div class="title1">- Team UFMG Brazil presents -</div>
 +
                    </div>
 +
                    <div class="slogan">How to stop a war<br>before it starts?</div>
 +
                    <div class="unit" style="padding-top:10px;">
 +
                      <div class="" style="padding-bottom:10px;"><img src="https://static.igem.org/mediawiki/2014/7/77/Logooverlay.png" alt=""></div>
 +
                      <div class="title1">Come closer and discover</div>
 +
                      <div class="title2" style="color: #eae6e3;">The Colon Yeast</div>
 +
                      <div>
 +
                          <p style="padding-top: 28px;">The hemiCherry in the (FAECAL) Cake</p>
 +
                          <img src="https://static.igem.org/mediawiki/2014/4/4b/Cherry1.png" alt="">
 +
                        </div>
 +
                      <!--
 +
                      <p><time datetime="2014-01-11">wednesday, may 28</time>
 +
                      &nbsp;|&nbsp;Winning Numbers:</p>
 +
                      <ul class="list">
 +
                          <li>19</li>
 +
                          <li>24</li>
 +
                          <li>45</li>
 +
                          <li>18</li>
 +
                          <li>36</li>
 +
                          <li>5</li>
 +
                      </ul>
 +
                      <div class="ticket">
 +
                          <a href="#">see current winning <br>ticket results</a>
 +
                      </div>
 +
                        -->
 +
                  </div>
 +
              </div>   
 +
          </div>   
 +
      </div>
 +
    </div>
 +
</header>
 +
<div class="clear"></div>
 +
         
 +
 
 +
    <!--========================================================
 +
                            CONTENT
 +
  =========================================================-->
 +
 
 +
 
 +
    <div id="content">
 +
        <div class="bg2 p29">
 +
            <div class="container">
 +
                <div class="row">
 +
                    <div class="grid_2 wrap"></div>
 +
                    <div class="grid_8 wrap">
 +
                        <div class="thumbnail">
 +
                            <h3>So, how to stop a war before it started?</h3>
 +
                            <br>
 +
                            <p style="text-transform: none;"><span>Colorectal cancer includes tumors affecting a segment of the large intestine (colon) and rectum. It is treatable and, in most cases, curable when detected early, before it hasn't spread to other organs. <br><br>However, the diagnosis requires a biopsy, made ​​by handset introduced via rectum. Noticeably, this procedure is highly invasive and often inhibits patients to submit to this practice, hampering the discovery of cancer at an early stage and thereby reducing the chances of effective treatment and cure. On our institution, a modified probiotic strain of Saccharomyces cerevisiae was isolated from local beverage.<br><br>Our objective is to introduce this strain as a new probiotic chassis on iGEM, and also to develop a gene circuit that allows it to detect one or more stool biomarkers for colorectal cancer on the intestine and report with a color change on the feces. We chose L-DNA (long DNA molecules) as biomarker, and designed a chimeric protein using TALE DNA-Binding Domains and a split version of mCherry.<br><br> This protein can detect certain repetitive sequences on DNA and emit red fluorescence, which when measured serve as proxy for the DNA size. Since RFP emission falls on the visible spectrum, it can also be used for staining the feces, allowing for a patient consuming the probiotic to become aware of the possibility of the developing problem just by checking on the color of their stool.</span></p>
 +
                        </div>
 +
                    </div>
 +
                </div>
 +
            </div>
 +
        </div>
 +
 
 +
<!--
 +
        <div class="bg3">
 +
            <div class="container">
 +
                <div class="row">
 +
                    <div class="grid_4 wrap">
 +
                        <div class="image" style="left: -54px;">
 +
                            <img src="images/redyeast.png" alt="">
 +
                        </div>
 +
                    </div>
 +
                    <div class="grid_8 wrap">
 +
                        <div class="block">
 +
                            <h2>Believe in your win! <span>Good luck!</span></h2>
 +
                            <div class="grid_4 alpha">
 +
                                <a href="#" class="link1">How To Play</a>
 +
                                <p>Praesent vestibulum aenean nonummy hendrerit mauris. Hasellus porta. Fusce suscipit varius mi. Cum sociis atoque penatibus magnis dis parturient montes nascetur ridiculus mus.</p>
 +
                            </div>
 +
                            <div class="grid_4 omega">
 +
                                <ul class="links">
 +
                                    <li><a href="#" class="col1">for <br>players</a>
 +
                                    </li>
 +
                                    <li><a href="#" class="col2">for <br>retailers</a>
 +
                                    </li>
 +
                                    <li><a href="#" class="col3">message <br>center</a>
 +
                                    </li>
 +
                                </ul>
 +
                            </div>
 +
                        </div>
 +
                    </div>
 +
                </div>
 +
            </div>
 +
        </div>
 +
      -->
 +
 
 +
 
 +
 
 +
        <!--
 +
 
 +
        <div class="bg4 p47">
 +
            <div class="container">
 +
                <div class="row">
 +
                    <div class="grid_12">
 +
                        <h2>latest winners:</h2>  
 +
                    </div>
 +
                </div>
 +
                <div class="row">
 +
                    <div class="grid_12">
 +
                      <div id="owl" class="owl-carousel">
 +
                          <div class="item">
 +
                              <div class="thumb">
 +
                                  <img src="images/page1_img2.jpg" alt="">
 +
                                  <div class="caption">
 +
                                      <a href="#" title="">Richard Clark</a>
 +
                                      <p>Won $1.000 <span>playing <br>$1000 overload</span></p>
 +
                                  </div>
 +
                              </div>
 +
                          </div>
 +
                          <div class="item">
 +
                              <div class="thumb">
 +
                                  <img src="images/page1_img3.jpg" alt="">
 +
                                  <div class="caption">
 +
                                      <a href="#" title="">Tamara Smith</a>
 +
                                      <p>Won $1.000 <span>playing <br>$1000 overload</span></p>
 +
                                  </div>
 +
                              </div>
 +
                          </div>
 +
                          <div class="item">
 +
                              <div class="thumb">
 +
                                  <img src="images/page1_img4.jpg" alt="">
 +
                                  <div class="caption">
 +
                                      <a href="#" title="">Linda Nelson</a>
 +
                                      <p>Won $1.000 <span>playing <br>$1000 overload</span></p>
 +
                                  </div>
 +
                              </div>
 +
                          </div>
 +
                          <div class="item">
 +
                              <div class="thumb">
 +
                                  <img src="images/page1_img5.jpg" alt="">
 +
                                  <div class="caption">
 +
                                      <a href="#" title="">George Johnson</a>
 +
                                      <p>Won $1.000 <span>playing <br>$1000 overload</span></p>
 +
                                  </div>
 +
                              </div>
 +
                          </div>
 +
                          <div class="item">
 +
                              <div class="thumb">
 +
                                  <img src="images/page1_img2.jpg" alt="">
 +
                                  <div class="caption">
 +
                                      <a href="#" title="">Richard Clark</a>
 +
                                      <p>Won $1.000 <span>playing <br>$1000 overload</span></p>
 +
                                  </div>
 +
                              </div>
 +
                          </div>
 +
                          <div class="item">
 +
                              <div class="thumb">
 +
                                  <img src="images/page1_img3.jpg" alt="">
 +
                                  <div class="caption">
 +
                                      <a href="#" title="">Tamara Smith</a>
 +
                                      <p>Won $1.000 <span>playing <br>$1000 overload</span></p>
 +
                                  </div>
 +
                              </div>
 +
                          </div>
 +
                      </div>                 
 +
                    </div>
 +
                </div>
 +
            </div>
 +
        </div>
 +
 
 +
  -->
 +
 
 +
        <div class="bg4 p35">
 +
            <div class="container">
 +
                <div class="row">
 +
                    <div class="grid_12 wrap">
 +
                        <h4>We are from Brazil!</h4>
 +
                        <p>aaa aaa</p>
 +
                    </div>
 +
                </div>
 +
            </div>
 +
        </div>
 +
    </div>
 +
 
 +
    <!--========================================================
 +
                            FOOTER
 +
  =========================================================-->
 +
 
 +
  <footer id="footer">
 +
      <div class="container">
 +
          <div class="row">
 +
              <div class="grid_12">
 +
                  <a class="logo1" href="https://2014.igem.org/Team:UFMG_Brazil">
 +
                    <img src="https://static.igem.org/mediawiki/2014/8/84/Yeastlogo_small_gray.png" alt="">
 +
                  </a>
 +
                  <div class="copy">
 +
                      <span>&nbsp;&copy;</span>
 +
                      <span id="copyright-year"></span>
 +
                      <span>|</span>
 +
                      <span><a href="https://2014.igem.org/Team:UFMG_Brazil">Team UFMG Brazil</a></span>
 +
                  </div>
 +
              </div>      
 +
          </div>
 +
      </div
 +
  </footer>
 +
 
 +
    <script src="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/jquery.js&action=raw&ctype=text/javascript"></script>
 +
    <script src="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/jquery-migrate-1.2.1.js&action=raw&ctype=text/javascript
 +
"></script>
 +
    <script src="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/owl.carousel.js&action=raw&ctype=text/javascript
 +
"></script>     
 +
    <script src="https://2014.igem.org/wiki/index.php?title=Template:UFMG_Brazil/script.js&action=raw&ctype=text/javascript
 +
"></script>
 +
 
 +
    <meta name="viewport" content="width=device-width,initial-scale=1.0,user-scalable=0">
 +
    <script>
 +
        $(document).ready(function() {
 +
            $("#owl").owlCarousel({
 +
                items: 4,
 +
                itemsDesktop: [1299, 4],
 +
                itemsTablet: [995, 3],
 +
                itemsTabletSmall: [767, 1],
 +
                itemsMobile: [479, 1],
 +
                lazyLoad: true,
 +
                pagination: false,
 +
                navigation: true
 +
            });
 +
        });
 +
        $( document ).ready(function() {
 +
          $('#topmenutoggle').click(function(){
 +
            toggleMenu();
 +
          });
 +
        });
 +
        function toggleMenu(){
 +
          if($('#top-section').css("height") == "25px"){
 +
              $('#top-section').css("height", "10px");
 +
              $('.left-menu').hide();
 +
              $('.right-menu').hide();
 +
          }
 +
          else{
 +
              $('#top-section').css("height", "25px");
 +
              $('.left-menu').show();
 +
              $('.right-menu').show();
 +
          }
 +
        }
 +
    </script>
 +
 
 +
    <a style="margin-right: -49px; right: 50%; display: none;" href="#" id="toTop" class="fa fa-chevron-up"></a>
 +
</body>
-
<div id="wrapper4">
 
-
<div id="footer" class="container">
 
-
<div>
 
-
<header class="title">
 
-
<h5>Get in touch</h5>
 
-
<span>Find us</span> </header>
 
-
                                </div>
 
-
</div>
 
-
</div>
 
-
<div id="footer">
 
-
<p></p>
 
-
</div>
 
</html>
</html>

Latest revision as of 17:44, 14 June 2015

Home UFMG Team

So, how to stop a war before it started?


Colorectal cancer includes tumors affecting a segment of the large intestine (colon) and rectum. It is treatable and, in most cases, curable when detected early, before it hasn't spread to other organs.

However, the diagnosis requires a biopsy, made ​​by handset introduced via rectum. Noticeably, this procedure is highly invasive and often inhibits patients to submit to this practice, hampering the discovery of cancer at an early stage and thereby reducing the chances of effective treatment and cure. On our institution, a modified probiotic strain of Saccharomyces cerevisiae was isolated from local beverage.

Our objective is to introduce this strain as a new probiotic chassis on iGEM, and also to develop a gene circuit that allows it to detect one or more stool biomarkers for colorectal cancer on the intestine and report with a color change on the feces. We chose L-DNA (long DNA molecules) as biomarker, and designed a chimeric protein using TALE DNA-Binding Domains and a split version of mCherry.

This protein can detect certain repetitive sequences on DNA and emit red fluorescence, which when measured serve as proxy for the DNA size. Since RFP emission falls on the visible spectrum, it can also be used for staining the feces, allowing for a patient consuming the probiotic to become aware of the possibility of the developing problem just by checking on the color of their stool.

We are from Brazil!

aaa aaa