Team:Northwestern/Project

From 2014.igem.org

(Difference between revisions)
Line 130: Line 130:
<!-- Content -->
<!-- Content -->
<div id="content">
<div id="content">
-
<article class="is is-post">
 
<header class="style1">
<header class="style1">
-
<h2>Lorem ipsum dolor sit amet magna egestas morbi bibendum sed malesuada</h2>
+
<h2>An incomplete description</h2>
-
<span class="byline">Tempus feugiat veroeros sed nullam dolore</span>
+
</header>
</header>
-
<a href="http://fav.me/d5pjw3g" class="image image-featured">
+
-
<img src="images/pic01.jpg" alt="" />
+
-
</a>
+
<p>The possibilities through synthetic biology are endless, but oftentimes the foundational scientific methods are not fully optimized or explored.  Each project operates fairly autonomously, pulling on the work of others to aid research, yet sometimes plowing ahead to solve the problem at hand without the contributions from predecessors.  The most categorized and recognized promoters are the Anderson Promoters (site/is this even a valid claim?).  (there were also many papers that Joe sent which talk about parts categorization) However, the rank classification for these promoters are based on the relative strength of maximum fluorescence and nothing else
<p>The possibilities through synthetic biology are endless, but oftentimes the foundational scientific methods are not fully optimized or explored.  Each project operates fairly autonomously, pulling on the work of others to aid research, yet sometimes plowing ahead to solve the problem at hand without the contributions from predecessors.  The most categorized and recognized promoters are the Anderson Promoters (site/is this even a valid claim?).  (there were also many papers that Joe sent which talk about parts categorization) However, the rank classification for these promoters are based on the relative strength of maximum fluorescence and nothing else
Line 144: Line 141:
</p>
</p>
-
</article>
 
-
<div>
 
-
<div class="row">
 
-
<div class="6u">
 
-
<section class="is is-pair-one">
 
-
<header>
 
-
<h2>Magna pulvinar tempus</h2>
 
-
</header>
 
-
<a href="http://fav.me/d5uvswq" class="image image-full"><img src="images/pic05.jpg" alt="" /></a>
 
-
<p>Rutrum bibendum. Proin pellentesque diam non ligula commodo tempor. Vivamus
 
-
eget urna nibh. Curabitur non fringilla nisl. Donec accumsan interdum nisi, quis
 
-
tempus.</p>
 
-
<a href="#" class="button button-style1">More</a>
 
-
</section>
 
-
</div>
 
-
<div class="6u">
 
-
<section class="is is-pair-two">
 
-
<header>
 
-
<h2>Magna pulvinar tempus</h2>
 
-
</header>
 
-
<a href="http://fav.me/d5qdf2o" class="image image-full"><img src="images/pic06.jpg" alt="" /></a>
 
-
<p>Rutrum bibendum. Proin pellentesque diam non ligula commodo tempor. Vivamus
 
-
eget urna nibh. Curabitur non fringilla nisl. Donec accumsan interdum nisi, quis
 
-
tempus.</p>
 
-
<a href="#" class="button button-style1">More</a>
 
-
</section>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
<!-- /Content -->
 
-
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
<!-- /Main -->
 
-
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
<!-- /Main Wrapper -->
 
-
 
-
<!-- Highlights Wrapper -->
 
-
<div class="wrapper wrapper-style3">
 
-
<div class="title">The Endorsements</div>
 
-
<div class="container">
 
-
<div class="row">
 
-
<div class="12u">
 
-
 
-
<!-- Highlights -->
 
-
<div id="highlights">
 
-
<div>
 
-
<div class="row">
 
-
<div class="4u">
 
-
<section class="highlight highlight-one">
 
-
<a href="http://fav.me/d59i3b3" class="image image-full"><img src="images/pic02.jpg" alt="" /></a>
 
-
<h3><a href="">Aliquam diam consequat</a></h3>
 
-
<p>Eget mattis at, laoreet vel amet sed velit aliquam diam ante, dolor aliquet sit amet vulputate mattis amet laoreet lorem.</p>
 
-
<ul class="actions">
 
-
<li><a href="#" class="button button-style1">Learn More</a></li>
 
-
</ul>
 
-
</section>
 
-
</div>
 
-
<div class="4u">
 
-
<section class="highlight highlight-two">
 
-
<a href="http://fav.me/d4tqyby" class="image image-full"><img src="images/pic03.jpg" alt="" /></a>
 
-
<h3><a href="#">Nisl adipiscing sed lorem</a></h3>
 
-
<p>Eget mattis at, laoreet vel amet sed velit aliquam diam ante, dolor aliquet sit amet vulputate mattis amet laoreet lorem.</p>
 
-
<ul class="actions">
 
-
<li><a href="#" class="button button-style1">Learn More</a></li>
 
-
</ul>
 
-
</section>
 
-
</div>
 
-
<div class="4u">
 
-
<section class="highlight highlight-three">
 
-
<a href="http://fav.me/d5w2dot" class="image image-full"><img src="images/pic04.jpg" alt="" /></a>
 
-
<h3><a href="#">Mattis tempus lorem</a></h3>
 
-
<p>Eget mattis at, laoreet vel amet sed velit aliquam diam ante, dolor aliquet sit amet vulputate mattis amet laoreet lorem.</p>
 
-
<ul class="actions">
 
-
<li><a href="#" class="button button-style1">Learn More</a></li>
 
-
</ul>
 
-
</section>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
<!-- /Highlights -->
 
-
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
<!-- /Highlights Wrapper -->
 
-
 
-
<!-- Footer Wrapper -->
 
-
<div id="footer-wrapper" class="wrapper">
 
-
<div class="title">The Rest Of It</div>
 
-
<div class="container">
 
-
<div class="row">
 
-
<div class="12u">
 
-
 
-
<!-- Footer -->
 
-
<div id="footer">
 
-
<header class="style1">
 
-
<h2>Ipsum sapien elementum portitor?</h2>
 
-
<p class="byline">
 
-
Sed turpis tortor, tincidunt sed ornare in metus porttitor mollis nunc in aliquet.<br />
 
-
Nam pharetra laoreet imperdiet volutpat etiam consequat feugiat.
 
-
</p>
 
-
</header>
 
-
<hr />
 
-
<div>
 
-
<div class="row">
 
-
<div class="6u">
 
-
 
-
<!-- Contact Form -->
 
-
<section class="footer-one">
 
-
<form method="post" action="#">
 
-
<div>
 
-
<div class="row half">
 
-
<div class="6u">
 
-
<input type="text" class="text" name="name" id="contact-name" placeholder="Name" />
 
-
</div>
 
-
<div class="6u">
 
-
<input type="text" class="text" name="name" id="contact-email" placeholder="Email" />
 
-
</div>
 
-
</div>
 
-
<div class="row half">
 
-
<div class="12u">
 
-
<textarea name="message" id="contact-message" placeholder="Message"></textarea>
 
-
</div>
 
-
</div>
 
-
<div class="row">
 
-
<div class="12u">
 
-
<ul class="actions">
 
-
<li><input type="submit" class="button button-style1" value="Send" /></li>
 
-
<li><input type="reset" class="button button-style2" value="Reset" /></li>
 
-
</ul>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</form>
 
-
</section>
 
-
<!-- /Contact Form -->
 
-
 
-
</div>
 
-
<div class="6u">
 
-
 
-
<!-- Contacts -->
 
-
<section class="footer-two">
 
-
<div class="feature-list feature-list-small">
 
-
<div>
 
-
<div class="row">
 
-
<div class="6u">
 
-
<section>
 
-
<h3 class="fa fa-home">Mailing Address</h3>
 
-
<p>
 
-
Untitled Corporation<br />
 
-
1234 Somewhere Rd #987<br />
 
-
Nashville, TN 00000-0000
 
-
</p>
 
-
</section>
 
-
</div>
 
-
<div class="6u">
 
-
<section>
 
-
<h3 class="fa fa-comment">Social</h3>
 
-
<p>
 
-
<a href="http://twitter.com/n33co">@n33co</a><br />
 
-
<a href="http://dribbble.com/n33">dribbble.com/n33</a><br />
 
-
<a href="#">facebook.com/untitled</a><br />
 
-
</p>
 
-
</section>
 
-
</div>
 
-
</div>
 
-
<div class="row">
 
-
<div class="6u">
 
-
<section>
 
-
<h3 class="fa fa-envelope">Email</h3>
 
-
<p>
 
-
<a href="#">info@untitled.tld</a>
 
-
</p>
 
-
</section>
 
-
</div>
 
-
<div class="6u">
 
-
<section>
 
-
<h3 class="fa fa-phone">Phone</h3>
 
-
<p>
 
-
(000) 555-0000
 
-
</p>
 
-
</section>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</div>
 
-
</section>
 
-
<!-- /Contacts -->
 
-
</div>
+
</div>
-
</div>
+
-
</div>
+
-
<hr />
+
-
</div>
+
-
<!-- /Footer -->
+
-
 
+
-
<!-- Copyright -->
+
-
<div id="copyright">
+
-
<span>
+
-
&copy; Untitled. Design by <a href="http://html5up.net/">HTML5 UP</a>.
+
-
</span>
+
-
</div>
+
-
<!-- /Copyright -->
+
-
+
-
</div>
+
-
</div>
+
-
</div>
+
-
</div>
+
-
<!-- /Footer Wrapper -->
+
 +
</body>
</body>
</html>
</html>

Revision as of 22:44, 13 August 2014

Our Project: Modelling Non-Model Organism

Overview

An incomplete description

The possibilities through synthetic biology are endless, but oftentimes the foundational scientific methods are not fully optimized or explored. Each project operates fairly autonomously, pulling on the work of others to aid research, yet sometimes plowing ahead to solve the problem at hand without the contributions from predecessors. The most categorized and recognized promoters are the Anderson Promoters (site/is this even a valid claim?). (there were also many papers that Joe sent which talk about parts categorization) However, the rank classification for these promoters are based on the relative strength of maximum fluorescence and nothing else

We aim/aimed to categorize the function of a number of promoters based on absolute maximum fluorescence and the time it took to reach that point. For industrial applications a quicker response time can minimize reaction time which could lead to economic benefit *other reasons why our project is so awesome*. The goal of *project name* was to explore and compare the different transcriptional and translational rates of known model organisms such as E. coli to various non-model strains, with all processes taking place in cell free systems. *talk about cell free system* Additionally, instead of testing all possible combinations of promoters, RBSs, and organisms, we tested a select number and then used predictive modeling to assess which combination yielded the strongest glow/signal/fluorescence. This is in the hopes that by compiling a list of well-characterized parts such as promoters and RBSs, the information could be used to further the field of synthetic biology through environmental, health, and industrial applications by minimizing the need to extensively modify E. Coli to meet particular environmental factors.