Team:DTU-Denmark/Achievements/Calculator

From 2014.igem.org

(Difference between revisions)

Revision as of 22:36, 17 October 2014

Fluorescence:
Standard curve, intercept:
Standard curve, slope:
Spinach concentration:		µM
	Input concentration directly

Insert text here!!!!!

CFU count			CFU/L
	Use OD measurement

OD600

Degradation rate:
	Use degradation half time

Degradation half time:

Growth rate:
	Use growth doubling time

Growth doubling time:

Fold-fraction:		%
Copy number:

Promoter activity

PoPS

@@ Line 2: / Line 2: @@
 <html>
+<script>
+$(document).ready(function() {
+    $("#calc-input").trigger("input");
+});
+</script>
 <style>
 #PoPScalculator table td {
@@ Line 32: / Line 37: @@
 <div id="PoPScalculator" style="width:800px;position:relative;">
+<form id = "calc-input" onchange = "
-<form onchange = "
-if (
-if (degcheck.checked) { degen.value = Math.log(2)/(parseFloat(deghalf.value)*parseFloat(deghalfunit.value)) };
-if (growthcheck.checked) { growth.value = Math.log(2)/(parseFloat(grodouble.value)*parseFloat(grodoubleunit.value)) };
-if (CFUcheck.checked) { CFU.value = (parseFloat(OD600.value)*1000000000000) };
-if (conccheck.checked) { activity.value = (parseFloat(intercept.value)) } ;
-activity.value = (parseFloat(concentration.value)/(parseFloat(CFU.value)/1000000000000)*(602200/(parseFloat(foldfraction.value)/100)))*((parseFloat(degen.value)/parseFloat(degenunit.value))+(parseFloat(growth.value)/parseFloat(growthunit.value)))/parseFloat(copynumber.value);
+var conc = (parseFloat(fluorescence.value)-parseFloat(intercept.value)) / parseFloat(slope.value);
+var CFUcount = parseFloat(CFU.value);
+var fold = parseFloat(foldfraction.value);
+var degenvar = parseFloat(degen.value)/parseFloat(degenunit.value);
+var degenunitvar = parseFloat(degenunit.value);
+var growthvar = parseFloat(degenunit.value)/parseFloat(growthunit.value);
+var growthunitvar = parseFloat(growthunit.value);
+if (conccheck.checked) { conc = parseFloat(concentration.value) };
+if (degcheck.checked) { degenvar = Math.log(2)/(parseFloat(deghalf.value)*parseFloat(deghalfunit.value)) };
+if (growthcheck.checked) { growthvar = Math.log(2)/(parseFloat(grodouble.value)*parseFloat(grodoubleunit.value)) };
+if (CFUcheck.checked) { CFUcount = (parseFloat(OD600.value)*1000000000000) };
+activity.value = (parseFloat(conc)/(parseFloat(CFUcount)/1000000000000)*(602200/(parseFloat(fold)/100)))*((parseFloat(degenvar))+(parseFloat(growthvar)))/parseFloat(copynumber.value);
 activity.value = Math.round(parseFloat(activity.value)*100000)/100000;
 activity.value = parseFloat(activity.value).toExponential();
-if (conccheck.checked) { activity.value = (parseFloat(intercept.value)) } ;
 ">
@@ Line 96: / Line 107: @@
 </table>
      </td>
+    <td>
+Insert text here!!!!!
+    </td>
    </tr>
    <tr>
@@ Line 134: / Line 156: @@
      <input name="degen" type="number" step="any" min="0" placeholder="rate" value="0.083" style="width:90px" />
      </td>
-     <td width="21%" style="padding-top:4px">
+     <td width="21%" style="padding-top:3px">
 	<select name="degenunit" style="width:80px">
 	<option value="3600">per hour</option>
@@ Line 156: / Line 178: @@
      <td width="21%" style="padding-top:4px">
 	<select name="deghalfunit">
-	<option value="3600">h</option>
+	<option value="3600">hours</option>
-	<option value="60">m</option>
+	<option value="60">minutes</option>
-	<option value="1">s</option>
+	<option value="1">seconds</option>
 	</select>
 	</td>
@@ Line 172: / Line 194: @@
      <td width="16%" style="text-align:right; padding-top: 3px;">
          <input name="growth" type="number" step="any" min="0" placeholder="growth" value="0.83" style="width:90px" />
-     <td width="21%" style="padding-top:4px">
+     <td width="21%" style="padding-top:3px">
 	<select name="growthunit" style="width:80px">
 	<option value="3600">per hour</option>
@@ Line 193: / Line 215: @@
      <td width="21%" style="padding-top:4px">
 	<select name="grodoubleunit">
-	<option value="3600">h</option>
+	<option value="3600">hours</option>
-	<option value="60">m</option>
+	<option value="60">minutes</option>
-	<option value="1">s</option>
+	<option value="1">seconds</option>
 	</select>
 	</td>
@@ Line 215: / Line 237: @@
      <td width="16%" style="text-align:right; padding-top: 3px;">
          <input name="copynumber" type="number" step="any" min="0" placeholder="Enter number" value="300" style="width:90px" />
-     </td width="21%">
+     </td>
      <td width="21%"></td>
    </tr>