Team:WLC-Milwaukee/Modeling

From 2014.igem.org

(Difference between revisions)
Line 6: Line 6:
Using the law of mass action the enzyme substrate complex, and product formation chemical equations, are separated into a set of differential equations. The MATLAB ode45 function is used to solve the set of differential equations over the given time span.
Using the law of mass action the enzyme substrate complex, and product formation chemical equations, are separated into a set of differential equations. The MATLAB ode45 function is used to solve the set of differential equations over the given time span.
 +
<h1>xynA at pH 7.3</h1>
 +
 +
</br>
<h2>Enzyme at 2-fold the Concentration of Substrate</h2>
<h2>Enzyme at 2-fold the Concentration of Substrate</h2>
Line 79: Line 82:
  </tr>
  </tr>
</table>
</table>
 +
</br>
 +
<p>DISCUSSION</p>
</html>
</html>

Revision as of 05:46, 17 October 2014

This code models Michaelis-Menten enzyme kinetics over a user inputted time duration. Product formation and enzyme-substrate complex formation are assumed irreversible. Initial concentrations of the E-S complex and product are assumed to be zero. And it does not account for the presence of inhibitors or activators. Using the law of mass action the enzyme substrate complex, and product formation chemical equations, are separated into a set of differential equations. The MATLAB ode45 function is used to solve the set of differential equations over the given time span.

xynA at pH 7.3


Enzyme at 2-fold the Concentration of Substrate

COMMENTS HERE COMMENTS HERE COMMENTS HERE

Enzyme at 10-fold the Concentration of Substrate

COMMENTS HERE COMMENTS HERE COMMENTS HERE

Enzyme at 100-fold the Concentration of Substrate

COMMENTS HERE COMMENTS HERE COMMENTS HERE

Increased Enzyme Concentration at 15 Seconds

COMMENTS HERE COMMENTS HERE COMMENTS HERE

DISCUSSION