Team:NEFU China/Biosafety
From 2014.igem.org
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<li>Q1. Please describe the chassis orgamisms you will be using in your project.</li> | <li>Q1. Please describe the chassis orgamisms you will be using in your project.</li> | ||
<li> | <li> | ||
- | <table | + | <table class="table table-bordered table-hover"> |
<tbody> | <tbody> | ||
<tr> | <tr> | ||
- | <td | + | <td></td> |
- | <td | + | <td><p> Species name </p></td> |
- | <td | + | <td><p> Risk Group </p></td> |
- | <td | + | <td><p> Risk Group Source </p></td> |
- | <td | + | <td><p> Disease risk to humans? </p></td> |
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 1 </p></td> |
- | <td | + | <td><p> <em>Synechococcus elongates</em> PCC7942 </p></td> |
- | <td | + | <td><p> 1 </p></td> |
- | <td | + | <td><p> <a href="http://www.atcc.org/Products/All/33912.aspx">http://www.atcc.org/Products/All/33912.aspx</a> </p></td> |
- | <td | + | <td><p> No </p></td> |
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 2 </p></td> |
- | <td | + | <td><p> <em>Bacillus subtilis</em> </p></td> |
- | <td | + | <td><p> 1 </p></td> |
- | <td | + | <td><p> It’s widely spread in the environment. And it is used in various areas and beneficial to human. </p></td> |
- | <td | + | <td><p> No </p></td> |
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 3 </p></td> |
- | <td | + | <td><p> <em>E.coli</em> (<em>DH5α</em>) </p></td> |
- | <td | + | <td><p> 1 </p></td> |
- | <td | + | <td><p> <a href="www.absa.org/riskgroups/bacteriasearch.php?genus=Escherichia">www.absa.org/riskgroups/bacteriasearch.php?genus=Escherichia</a></p></td> |
- | <td | + | <td><p> No </p></td> |
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 4 </p></td> |
- | <td | + | <td><p> <em>E.coli</em> (<em>Rosetta pLysS</em>) </p></td> |
- | <td | + | <td><p> 1 </p></td> |
- | <td | + | <td><p> <a href="www.absa.org/riskgroups/bacteriasearch.php?genus=Escherichia">www.absa.org/riskgroups/bacteriasearch.php?genus=Escherichia</a></p></td> |
- | <td | + | <td><p> No </p></td> |
</tr> | </tr> | ||
</tbody> | </tbody> | ||
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<li>Q2. List and describe all new parts you will be using in your project.</li> | <li>Q2. List and describe all new parts you will be using in your project.</li> | ||
<li> | <li> | ||
- | <table | + | <table class="table table-bordered table-hover"> |
<tbody> | <tbody> | ||
<tr> | <tr> | ||
- | <td | + | <td></td> |
- | <td | + | <td><p> Part name </p></td> |
- | <td | + | <td><p> Natural function of part </p></td> |
- | <td | + | <td><p> How did you acquire it? </p></td> |
- | <td | + | <td><p> How will you use it? </p></td> |
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 1 </p></td> |
- | <td | + | <td><p> BBa_K1509000 </p></td> |
- | <td | + | <td><p> Coding SmtB </p></td> |
- | <td | + | <td><p> Using PCR to isolate it from </p> |
<p> <em>Synechococcus elongates</em> </p> | <p> <em>Synechococcus elongates</em> </p> | ||
<p> PCC7942 </p></td> | <p> PCC7942 </p></td> | ||
- | <td | + | <td><p> Bind and regulate </p> |
<p> smtO/P </p></td> | <p> smtO/P </p></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 2 </p></td> |
- | <td | + | <td><p> BBa_K1509001 </p></td> |
- | <td | + | <td><p> A regulator which is affected by </p> |
<p> SmtB protein </p></td> | <p> SmtB protein </p></td> | ||
- | <td | + | <td><p> Using PCR to isolate it from </p> |
<p> <em>Synechococcus elongates</em> </p> | <p> <em>Synechococcus elongates</em> </p> | ||
<p> PCC7942 </p></td> | <p> PCC7942 </p></td> | ||
- | <td | + | <td><p> Detect the heavy </p> |
<p> metal ions with part1 </p></td> | <p> metal ions with part1 </p></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 3 </p></td> |
- | <td | + | <td><p> BBa_K1509002 </p></td> |
- | <td | + | <td><p> Mainly responsible for </p> |
<p> flocculent activity </p></td> | <p> flocculent activity </p></td> | ||
- | <td | + | <td><p> Using PCR to isolate it from <em>Bacillus subtilis</em> </p></td> |
- | <td | + | <td><p> Flocculate bacteria </p> |
<p> to collect nanocrystals </p></td> | <p> to collect nanocrystals </p></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td | + | <td><p> 4 </p></td> |
- | <td | + | <td><p> BBa_K1509003 </p></td> |
- | <td | + | <td><p> A strong </p> |
<p> Constitutive promoter </p></td> | <p> Constitutive promoter </p></td> | ||
- | <td | + | <td><p> Synthesized by BGI Tech </p></td> |
- | <td | + | <td><p> regulate CDS7 </p> |
<p> gene expression </p></td> | <p> gene expression </p></td> | ||
</tr> | </tr> |
Revision as of 01:14, 17 October 2014
Biosafety
Overview
All of NEFU_China members completed safety training before the start of our project. The programs about safety training can be found here: http://dept.nefu.edu.cn/life/list/?227_1.html.(Chinese version). The Laboratory Biosafety Manual published by WHO has provided practical guidance for us. We work in a BSL1 lab equipped well to meet the safety criteria.
Q&A Section
- Q1. Please describe the chassis orgamisms you will be using in your project.
-
Species name
Risk Group
Risk Group Source
Disease risk to humans?
1
Synechococcus elongates PCC7942
1
No
2
Bacillus subtilis
1
It’s widely spread in the environment. And it is used in various areas and beneficial to human.
No
3
E.coli (DH5α)
1
www.absa.org/riskgroups/bacteriasearch.php?genus=Escherichia
No
4
E.coli (Rosetta pLysS)
1
www.absa.org/riskgroups/bacteriasearch.php?genus=Escherichia
No
- Q2. List and describe all new parts you will be using in your project.
-
Part name
Natural function of part
How did you acquire it?
How will you use it?
1
BBa_K1509000
Coding SmtB
Using PCR to isolate it from
Synechococcus elongates
PCC7942
Bind and regulate
smtO/P
2
BBa_K1509001
A regulator which is affected by
SmtB protein
Using PCR to isolate it from
Synechococcus elongates
PCC7942
Detect the heavy
metal ions with part1
3
BBa_K1509002
Mainly responsible for
flocculent activity
Using PCR to isolate it from Bacillus subtilis
Flocculate bacteria
to collect nanocrystals
4
BBa_K1509003
A strong
Constitutive promoter
Synthesized by BGI Tech
regulate CDS7
gene expression
- Q3. Risks to the safety and health of team members or others working in the lab?
- We worked in a BSL1 lab and all of us had received the safety training. We have worked out an emergency package.
- Q4. What safety training have you received?
- In July, we completed Laboratory Biosafety Manual, Chemical/Fire/Electrical safety trainings before the start of our wet lab work. You can get more information here:http://dept.nefu.edu.cn/life/list/?227_1.html(Chinese version) If you have any questions, please contact us.
- Q5. Risks to the security through malicious misuse by individuals, groups, or countries?
- The biological materials we used have no menace and we have effective measures to prevent someone from misusing.
- Q6. If your project moved from a small-scale lab study to become widely used as a commercial/industrial product, what new risks might arise? Also, what risks might arise if the knowledge you generate or the methods you develop became widely available?
- Our project includes special feature to reduce this risk. The flocculation module was designed to carry our project forward to commercial/industrial product.
- Q7. Does your country have national biosafety regulations or guidelines? If so, please provide a link to these regulations or guidelines if possible.
- Here you can see our national biosafety regulations and guidelines: http://www.stee.agri.gov.cn/biosafety(Chinese version) If you have any questions, please contact us.