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| <article class="abg-pcb"> | | <article class="abg-pcb"> |
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- | <h2>Aalto-Helsinki Bioworks in Short</h2> | + | <h2>The Story of Aalto-Helsinki Bioworks</h2> |
- | <p> | + | <div class="row"> |
- | We are Aalto-Helsinki Bioworks, the first-ever Finnish iGEM Team and one of the four teams in the new Entrepreneurship Track. Our <a href="https://2014.igem.org/Team:Aalto-Helsinki/Team">team</a> consist of nine students from Aalto University and the University of Helsinki and we are combining our interdisciplinary forces to develop something new and fascinating. We want to put Finland on the map of synthetic biology and improve undergraduate research opportunities in our universities. | + | <div class="col-md-6 text-col-left"> |
- | </p>
| + | <p> |
- | <p>
| + | We are Aalto-Helsinki Bioworks, the first-ever Finnish iGEM Team and one of the four teams in the new Entrepreneurship Track. Our <a href="https://2014.igem.org/Team:Aalto-Helsinki/Team">team</a> consist of nine students from Aalto University and the University of Helsinki and we are combining our interdisciplinary forces to develop something new and fascinating. We want to put Finland on the map of synthetic biology and improve undergraduate research opportunities in our universities. |
- | We have <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research">designed</a> a three-channel gene switch that would make it possible to control three user-defined genes with blue light intensity. We are using <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#yf1-title">YF1</a> as our light receptor protein and the signal is mediated to lambda repressor protein (CI) production via phosphorylation pathway. The concentration of CI protein defines the gene that should be active at the time using a <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#lambda-title">lambda repressor</a> mechanism.
| + | </p> |
- | </p>
| + | <p> |
- | <p>
| + | We have <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research">designed</a> a three-channel gene switch that would make it possible to control three user-defined genes with blue light intensity. We are using <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#yf1-title">YF1</a> as our light receptor protein and the signal is mediated to lambda repressor protein (CI) production via phosphorylation pathway. The concentration of CI protein defines the gene that should be active at the time using a <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#lambda-title">lambda repressor</a> mechanism. |
- | The modeling team constructed a mathematical <a href="https://2014.igem.org/Team:Aalto-Helsinki/Modeling">model</a> that simulates the interactions of the molecules and function of the gene switch we designed. This revealed interesting phenomena in the dynamics of our system which helps us to better understand the capabilities and limitations of the gene switch. We also made an <a href="http://igem-qsf.github.io/SimCircus/WebUI/">interactive simulation</a> available to everybody to best illustrate how our idea actually works.
| + | </p> |
- | </p>
| + | <p> |
- | <p>
| + | The modeling team constructed a mathematical <a href="https://2014.igem.org/Team:Aalto-Helsinki/Modeling">model</a> that simulates the interactions of the molecules and function of the gene switch we designed. This revealed interesting phenomena in the dynamics of our system which helps us to better understand the capabilities and limitations of the gene switch. We also made an <a href="http://igem-qsf.github.io/SimCircus/WebUI/">interactive simulation</a> available to everybody to best illustrate how our idea actually works. |
- | The <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#ledrig-title">LED rig</a> is a device for controlling, how much the cell cultures are exposed to blue light. This enabled us to do diverse <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#fluorescence-title"></a>experiments to characterize our light response element. These <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#Results">results</a> show that our light response element is able to regulate the downstream gene expression precisely. In addition, the response time is in a ten-minute-scale, which enables constant and nearly real-time control over bacterial cultures. In addition, we hypothesize that this systems is also applicable to bioreactors which would enable higher level of control in industrial bioprocesses. However, our fully functional prototype is still under ongoing development.
| + | </p> |
- | </p>
| + | <p> |
- | <p>
| + | The <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#ledrig-title">LED rig</a> is a device for controlling, how much the cell cultures are exposed to blue light. This enabled us to do diverse <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#fluorescence-title"></a>experiments to characterize our light response element. These <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#Results">results</a> show that our light response element is able to regulate the downstream gene expression precisely. In addition, the response time is in a ten-minute-scale, which enables constant and nearly real-time control over bacterial cultures. In addition, we hypothesize that this systems is also applicable to bioreactors which would enable higher level of control in industrial bioprocesses. However, our fully functional prototype is still under ongoing development. |
- | We have developed an open approach to <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business">biotech business</a> inspired by Open Source model. Following the Open Source philosophy, we distribute open Aalto-Helsinki Bioworks technologies for free to everybody as long as they share the improvements made on the technology. Therefore, we empower our users to participate in product development. Our <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#canvas-title">business model</a> is based on hardware and wide range of services offered to our customers.
| + | </p> |
- | </p>
| + | <p> |
- | <p>
| + | We have developed an open approach to <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business">biotech business</a> inspired by Open Source model. Following the Open Source philosophy, we distribute open Aalto-Helsinki Bioworks technologies for free to everybody as long as they share the improvements made on the technology. Therefore, we empower our users to participate in product development. Our <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#canvas-title">business model</a> is based on hardware and wide range of services offered to our customers. |
- | During the summer, we participated in Aalto Entrepreneurship Society’s <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#Sos">Summer of Startups 2014</a> incubator programme to learn the essential entrepreneurial skills, such as pitching, investor relations, customer-driven development and <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#pitch-title">explaining</a> the science for general audience. See our Demo Day video for details.
| + | </p> |
- | </p>
| + | <p> |
- | <p>
| + | During the summer, we participated in Aalto Entrepreneurship Society’s <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#Sos">Summer of Startups 2014</a> incubator programme to learn the essential entrepreneurial skills, such as pitching, investor relations, customer-driven development and <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#pitch-title">explaining</a> the science for general audience. See our Demo Day video for details. |
- | iGEM is an international experience and as the first Finnish team, we went to find advice and experience around the globe. We contributed to the iGEM community by building a <a href="https://2014.igem.org/Team:Aalto-Helsinki/Cooperation#Seekers">BioBrick Seeker</a> tool which makes it easy to find interesting parts in the 2014 BioBrick distribution. This tool has been used by iGEM teams all over the world! We also did a lot of <a href="https://2014.igem.org/Team:Aalto-Helsinki/Cooperation#Interteam">cooperation</a>, including filling out surveys and having skype conversations and live meetings with current and previous iGEM teams from France, Colombia, Switzerland, USA and the Netherlands. We even made a <a href="http://www.youtube.com/embed/icPgP3OOVOQ?rel=0">video</a> together with ETH Zürich team to Colombia team’s challenge.
| + | </p> |
- | </p>
| + | <p> |
- | <p>
| + | iGEM is an international experience and as the first Finnish team, we went to find advice and experience around the globe. We contributed to the iGEM community by building a <a href="https://2014.igem.org/Team:Aalto-Helsinki/Cooperation#Seekers">BioBrick Seeker</a> tool which makes it easy to find interesting parts in the 2014 BioBrick distribution. This tool has been used by iGEM teams all over the world! We also did a lot of <a href="https://2014.igem.org/Team:Aalto-Helsinki/Cooperation#Interteam">cooperation</a>, including filling out surveys and having skype conversations and live meetings with current and previous iGEM teams from France, Colombia, Switzerland, USA and the Netherlands. We even made a <a href="http://www.youtube.com/embed/icPgP3OOVOQ?rel=0">video</a> together with ETH Zürich team to Colombia team’s challenge. |
- | We want to <a href="https://2014.igem.org/Team:Aalto-Helsinki/Outreach">raise awareness</a> about synthetic biology in Finland and also showcase researchers’ work to young people and undergraduate students. Therefore, we have been reaching out to general public and young people via <a href="https://2014.igem.org/Team:Aalto-Helsinki/Outreach#SoMe">social media</a>, including <a href="http://www.facebook.com/AaltoHelsinki">Facebook</a>, <a href="http://twitter.com/AaltoHelsinki">Twitter</a>, <a href="http://www.youtube.com/channel/UCEZliqjLu86CRpQlk57FfSw">Youtube</a>, <a href="http://www.flickr.com/photos/aaltohelsinki/">Flickr</a> and our own <a href="http://2014.aaltohelsinki.com/blog/">blog</a>. We’ve shared stories, pictures, videos and experiences to our followers. In addition, we have have been featured in radio interviews and articles on magazines and webzines. We also made a silly game: <a href="https://2014.igem.org/Team:Aalto-Helsinki/Flappycoli">Flappy Coli</a>. Wehave a public team webpage, <a href="http://2014.aaltohelsinki.com/">aaltohelsinki.com</a>, where you can find the latest stories of Aalto Helsinki also in the future. We lifted some of the highlights of this project on a <a href="https://2014.igem.org/Team:Aalto-Helsinki/Journal#Timeline">timeline</a>: the story of Aalto-Helsinki Bioworks is there for you to see!
| + | </p> |
- | </p>
| + | <p> |
- | <br> | + | We want to <a href="https://2014.igem.org/Team:Aalto-Helsinki/Outreach">raise awareness</a> about synthetic biology in Finland and also showcase researchers’ work to young people and undergraduate students. Therefore, we have been reaching out to general public, especially young people via <a href="https://2014.igem.org/Team:Aalto-Helsinki/Outreach#SoMe">social media</a>, including <a href="http://www.facebook.com/AaltoHelsinki">Facebook</a>, <a href="http://twitter.com/AaltoHelsinki">Twitter</a>, <a href="http://www.youtube.com/channel/UCEZliqjLu86CRpQlk57FfSw">Youtube</a>, <a href="http://www.flickr.com/photos/aaltohelsinki/">Flickr</a> and our own <a href="http://2014.aaltohelsinki.com/blog/">blog</a>. We’ve shared stories, pictures, videos and experiences to our followers. In addition, we have have been featured in radio interviews and articles on magazines and webzines. We also made a silly game: <a href="https://2014.igem.org/Team:Aalto-Helsinki/Flappycoli">Flappy Coli</a>. We have a public team webpage, <a href="http://2014.aaltohelsinki.com/">aaltohelsinki.com</a>, where you can find the latest stories of Aalto Helsinki also in the future. We lifted some of the highlights of this project on a <a href="https://2014.igem.org/Team:Aalto-Helsinki/Journal#Timeline">timeline</a>: the story of Aalto-Helsinki Bioworks is there for you to see! |
- | <img src="https://static.igem.org/mediawiki/2014/e/e9/Aalto_Helsinki_ci-500.png" class="img-responsive center-block" id="ci-circle"> | + | </p> |
| + | </div> |
| + | <div class="col-md-6 img-100"> |
| + | <img src="https://static.igem.org/mediawiki/2014/a/a2/Aalto_Helsinki_Banner.png" class="img-responsive"> |
| + | </div> |
| + | </div> |
| + | |
| | | |
| </article> | | </article> |
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| <h2>Accomplishments</h2> | | <h2>Accomplishments</h2> |
| <ul> | | <ul> |
- | <li>Background research, design and the creation of a Three-Channel Gene Switch</li> | + | <li>Background research, design and the creation of a <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research">Three-Channel Gene Switch</a></li> |
- | <li>Submission of three new BioBricks and two new primers to the Registry</li> | + | <li>Submission of <a href="https://2014.igem.org/Team:Aalto-Helsinki/Research#Parts">three new BioBricks and two new primers to the Registry</a></li> |
- | <li>Creation of an Open Source based Business Model and a Business Plan for Synthetic Biology entrepreneurship</li> | + | <li>Creation of an <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#Plan">Open Source based Business Model and a Business Plan</a> for Synthetic Biology entrepreneurship</li> |
| <li>Pitch to an audience of 1000+ people</li> | | <li>Pitch to an audience of 1000+ people</li> |
- | <li>BioBrick Seeker and Team Seeker</li> | + | |
- | <li>Participation to the Summer of Startups incubator program</li> | + | <li>Participation to the <a href="https://2014.igem.org/Team:Aalto-Helsinki/Business#Sos">Summer of Startups</a>, a startup incubator program</li> |
- | <li>Connecting with investors and general public</li> | + | <li>Connecting with <a href="https://2014.igem.org/Team:Aalto-Helsinki/Outreach">investors and general public</a></li> |
| <li>Website, logo and brand design</li> | | <li>Website, logo and brand design</li> |
- | <li>Collecting 45 000€ funding</li>
| |
| <li>Public website for our project</li> | | <li>Public website for our project</li> |
- | <li>Wiki page for the project</li> | + | <li>BioBrick Seeker and Team Seeker</li> |
- | <li>A poster</li> | + | <li>Wiki page</li> |
| + | <li>Poster</li> |
| <li>Presentation at the Giant Jamboree</li> | | <li>Presentation at the Giant Jamboree</li> |
| <li>Participation in Measurement Interlabs Study</li> | | <li>Participation in Measurement Interlabs Study</li> |
| <li>Collaboration with other iGEM teams</li> | | <li>Collaboration with other iGEM teams</li> |
| + | <li>Collecting 45 000€ funding</li> |
| </ul> | | </ul> |
| + | <img src="https://static.igem.org/mediawiki/2014/e/e9/Aalto_Helsinki_ci-500.png" class="img-responsive center-block" id="ci-circle"> |
| | | |
| </article> | | </article> |
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| <p> | | <p> |
- | Our wiki has seven different categories in addition to this main page. On each of them you can just scroll through the content until you're finished reading. Everything about the subject can be found on one page, additional material is provided when possible and pages discussing similar topics are linked to each other. | + | Our wiki has seven different categories in addition to this main page. On each of them you can just scroll through the content until you're finished reading. Everything about the subject can be found on one page, additional material is provided when possible and pages discussing similar topics are linked to each other. A submenu will also appear when you start scrolling so watch! |
| </p> | | </p> |
| <div class="row row-eq-height"> | | <div class="row row-eq-height"> |