|
|
(34 intermediate revisions not shown) |
Line 1: |
Line 1: |
- | __NOTOC__
| + | #REDIRECT [[Team:Aachen/Notebook/Wetlab]] |
- | {{Team:Aachen/Header}}
| + | |
- | | + | |
- | | + | |
- | <html><ul class="team-grid">
| + | |
- | <!-- team member profiles -->
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/Team:Aachen/Notebook/Wetlab/April" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> April </b>
| + | |
- | <br/><br/>
| + | |
- | Organization and preparation
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/3/35/Aachen_team_member_Michael_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Fgohr" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Florian Gohr </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Molecular and Applied Biotechnology </i>
| + | |
- | <br/><br/>
| + | |
- | King Gibson
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/c/ca/Aachen_team_member_Florian_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:AZimmermann" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Arne Zimmermann </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Molecular and Applied Biotechnology M.Sc. </i>
| + | |
- | <br/><br/>
| + | |
- | Planning, Coordination and Fundrainsing
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/8/88/Aachen_team_member_Arne_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Nbailly" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Nina Bailly </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Molecular and Applied Biotechnology </i>
| + | |
- | <br/><br/>
| + | |
- | Public Relations and Wiki
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/4/48/Aachen_team_member_Nina_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:VeraA" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Vera Alexandrova </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Biology </i>
| + | |
- | <br/><br/>
| + | |
- | Goddess of Plasmid Prep
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/8/81/Aachen_team_member_Vera_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Pdemling" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Philipp Demling </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Molecular and Applied Biotechnology </i>
| + | |
- | <br/><br/>
| + | |
- | Prince of bad Puns
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/7/77/Aachen_team_member_Philipp_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:R.hanke" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> René Hanke </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Molecular and Applied Biotechnology </i>
| + | |
- | <br/><br/>
| + | |
- | Commissioner for communication
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/b/b7/Aachen_team_member_Rene_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:PatrickO" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Patrick Opdenstein </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Molecular and Applied Biotechnology </i>
| + | |
- | <br/><br/>
| + | |
- | Lab servant
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/1/1a/Aachen_team_member_Patrick_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Bpeeters" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Björn Peeters </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Computational Engineering Science </i>
| + | |
- | <br/><br/>
| + | |
- | Hardware Master
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/8/8d/Aachen_team_member_Bjoern_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Eshani.sood" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Eshani Sood </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Biomedical Engineering </i>
| + | |
- | <br/><br/>
| + | |
- | Lab Division
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/5/52/Aachen_team_member_Eshani_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Mjoppich" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Markus Joppich </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Computer Science </i>
| + | |
- | <br/><br/>
| + | |
- | Software King and Travel Assistant
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/8/83/Aachen_team_member_Markus_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Ansgar" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Ansgar Niemöller </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Computational Engineering Science </i>
| + | |
- | <br/><br/>
| + | |
- | GUI Master
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/4/4e/Aachen_team_member_Ansgar_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:J.plum" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Julia Plum </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Biology and Business Administration </i>
| + | |
- | <br/><br/>
| + | |
- | Fundraising and Balancing
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/c/c9/Aachen_team_member_Julia_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:StefanReinhold" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Stefan Reinhold </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Molecular and Applied Biotechnology </i>
| + | |
- | <br/><br/>
| + | |
- | Treasurer
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/0/0c/Aachen_team_member_Stefan_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Aschechtel" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Anna Schechtel </b>
| + | |
- | <br/><br/>
| + | |
- | <i> Biology </i>
| + | |
- | <br/><br/>
| + | |
- | Chip Queen
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/a/a4/Aachen_team_member_Anna_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | <li><a href="https://2014.igem.org/User:Suresh.sudarsan" style="color:black">
| + | |
- | <div class="team-item team-info" >
| + | |
- | <br/><br/>
| + | |
- | <b> Dr.-Ing. Suresh Sudarsan </b>
| + | |
- | <br/><br/>
| + | |
- | <i> </i>
| + | |
- | <br/><br/>
| + | |
- | Supervisor
| + | |
- | <br/><br/>
| + | |
- | <!-- click for more information -->
| + | |
- | </div>
| + | |
- | <div class="team-item team-img" style="background: url(https://static.igem.org/mediawiki/2014/5/57/Aachen_team_member_Suresh_01.jpg); norepeat scroll 0% 0% transparent; background-size:100%"> </div></a>
| + | |
- | </li>
| + | |
- | | + | |
- | </ul></html>
| + | |
- | = April =
| + | |
- | == 1st ==
| + | |
- | '''Organization'''
| + | |
- | | + | |
- | where to get:
| + | |
- | * key cards and keys for the lab
| + | |
- | * cooled centifuge
| + | |
- | * space in -80 °C
| + | |
- | * bottles for 70 % ethanol
| + | |
- | * ... (problems of a first year team ^^)
| + | |
- | | + | |
- | [https://2014.igem.org/Team:Aachen/Notebook/Wetlab/April Read more about April here...] | + | |
- | | + | |
- | {{Team:Aachen/BlockSeparator}}
| + | |
- | | + | |
- | = May =
| + | |
- | == 1st ==
| + | |
- | * gel with M - full -full - REACh1 SOE3.2 - REACH2 SOE3.2 - M
| + | |
- | *: → 120 V, 30 min
| + | |
- | *: → cut out the bands
| + | |
- | | + | |
- | [https://2014.igem.org/Team:Aachen/Notebook/Wetlab/May Read more about May here...] | + | |
- | | + | |
- | {{Team:Aachen/BlockSeparator}}
| + | |
- | | + | |
- | = June =
| + | |
- | == 3rd ==
| + | |
- | * transformation of 34 BioBricks
| + | |
- | | + | |
- | == 4th ==
| + | |
- | | + | |
- | * preparation of consumables:
| + | |
- | ** fresh 50 % glycerol
| + | |
- | ** new LB plates with cam and with kanamycin (kan)
| + | |
- | ** 60 glas tubes
| + | |
- | ** 2 L LB<sup>-</sup>
| + | |
- | ** 100 mL steril glas beads for plating
| + | |
- | | + | |
- | * master plates (6 clones per BioBrick) were made
| + | |
- | | + | |
- | [https://2014.igem.org/Team:Aachen/Notebook/Wetlab/June Read more about June here...]
| + | |
- | | + | |
- | {{Team:Aachen/BlockSeparator}}
| + | |
- | | + | |
- | = July =
| + | |
- | == 1st ==
| + | |
- | * transformation efficiency kit is broken
| + | |
- | → run an agarose gel with the kit plasmids to check for nuclease activity/ bands
| + | |
- | * inventory of the -80°C freezer was done
| + | |
- | | + | |
- | == 2nd ==
| + | |
- | * overnight cultures (LB) of K731520 and K1319042 for chips were inoculated
| + | |
- | | + | |
- | [https://2014.igem.org/Team:Aachen/Notebook/Wetlab/July Read more about July here...]
| + | |
- | | + | |
- | {{Team:Aachen/BlockSeparator}}
| + | |
- | | + | |
- | = August =
| + | |
- | == 1st ==
| + | |
- | * made electrocompetent ''E.coli'' rosetta cells.
| + | |
- | * prepared cultures of K1319042 and K131026
| + | |
- | | + | |
- | == 2nd ==
| + | |
- | * tested the OD measurement device and compared it to the spectrophotometer and the plate reader.
| + | |
- | * tested K131026 and K1319042 for fluorescence in the plate reader
| + | |
- | * did a heat shock transformation of I746909 into NEB TOP 10 cells
| + | |
- | * did an electroshock transformation of pET17-Gal3 into ''E.coli'' rosetta
| + | |
- | | + | |
- | [https://2014.igem.org/Team:Aachen/Notebook/Wetlab/August Read more about August here...]
| + | |
- | | + | |
- | {{Team:Aachen/BlockSeparator}}
| + | |
- | | + | |
- | = September =
| + | |
- | == 1st ==
| + | |
- | * 5 ml cultures of K1319003 and K1319004
| + | |
- | * plasmid prep
| + | |
- | {| class="wikitable"
| + | |
- | |-
| + | |
- | ! Plasmid !! DNA [ng/µl]
| + | |
- | |-
| + | |
- | | J23101.K516032 pSB1K3|| 23.5
| + | |
- | |-
| + | |
- | | J23115.K516032 pSB1K3|| 20.5
| + | |
- | |-
| + | |
- | | J04450 pSB1A3|| 57.5
| + | |
- | |-
| + | |
- | | J04450 pSB1K1|| 63.5
| + | |
- | |}
| + | |
- | * over night cultures of K131026 in DH5α and NEB
| + | |
- | | + | |
- | [https://2014.igem.org/Team:Aachen/Notebook/Wetlab/September Read more about September here...]
| + | |
- | | + | |
- | {{Team:Aachen/BlockSeparator}}
| + | |
- | | + | |
- | = October =
| + | |
- | == 1st ==
| + | |
- | * Preparations for sensor-chip production on the following day (2014-10-02) was done accoringly to the [https://2014.igem.org/Team:Aachen/Notebook/Protocols#Agar_Chips| sensor chip manufacturing] protocol:
| + | |
- | ** At 18:30 we prepared over-night cultures from K1319042, B0015 and K131026 by inoculating 250 ml Erlenmeyer flasks each containing 50 ml LB medium . The flasks were incubated for ~12 hours at 37 °C on a shaker.
| + | |
- | | + | |
- | [https://2014.igem.org/Team:Aachen/Notebook/Wetlab/October Read more about October here...]
| + | |
- | | + | |
- | | + | |
- | {{Team:Aachen/Footer}}
| + | |