Team:HIT-Harbin/Design
From 2014.igem.org
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<div id="project" class="nav1" onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"> <a href="https://2014.igem.org/Team:HIT-Harbin/Project/Design" name="top"><span>Project</span></a> | <div id="project" class="nav1" onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"> <a href="https://2014.igem.org/Team:HIT-Harbin/Project/Design" name="top"><span>Project</span></a> | ||
<ul> | <ul> | ||
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<li><a href="https://2014.igem.org/Team:HIT-Harbin/Background">Background</a></li> | <li><a href="https://2014.igem.org/Team:HIT-Harbin/Background">Background</a></li> | ||
<li><a href="https://2014.igem.org/Team:HIT-Harbin/Design">Design</a></li> | <li><a href="https://2014.igem.org/Team:HIT-Harbin/Design">Design</a></li> | ||
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<div id="humanPractices" class="nav1" onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="https://2014.igem.org/Team:HIT-Harbin/Humanpractices">Human practices</a> | <div id="humanPractices" class="nav1" onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="https://2014.igem.org/Team:HIT-Harbin/Humanpractices">Human practices</a> | ||
<ul> | <ul> | ||
- | <li><a href="https://2014.igem.org/Team:HIT-Harbin/ | + | <li><a href="https://2014.igem.org/Team:HIT-Harbin/Preliminary">Preliminary</a></li> |
- | <li><a href="https://2014.igem.org/Team:HIT-Harbin/ | + | <li><a href="https://2014.igem.org/Team:HIT-Harbin/Meetup">Meet Up</a></li> |
- | <li><a href="https://2014.igem.org/Team:HIT-Harbin/ | + | <li><a href="https://2014.igem.org/Team:HIT-Harbin/Course">Course</a></li> |
- | <li><a href="https://2014.igem.org/Team:HIT-Harbin/ | + | <li><a href="https://2014.igem.org/Team:HIT-Harbin/Wechat">WeChat</a></li> |
- | + | </ul> | |
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</div> | </div> | ||
</div> | </div> | ||
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<div class="multi-columns"> | <div class="multi-columns"> | ||
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<div id="subtitle"> | <div id="subtitle"> | ||
- | <h4> | + | <h3>DIOXIN DETECTIVE</h3> |
+ | </div> | ||
+ | <div id="subtitle"> | ||
+ | <h4>DIOXIN SENSOR</h4> | ||
+ | </div> | ||
+ | <div id="subtitle"> | ||
+ | <h5 >AhR RECEPTOR</h5> | ||
</div> | </div> | ||
<div class="paragraphs"> | <div class="paragraphs"> | ||
- | <p> | + | <p> AhR(arylhydrocarbon receptor)是在生命体内的二恶英及其类似物的结合受体,它能在二恶英的诱导下,通过膜转运与生物体内DNA相关序列结合,促使下游xenobiotic metabolizing enzymes(XMEs) 家族中的 CYP1A1 gene 表达,从而对生物体代谢进行不同程度的调控。 其具体的调控方式如图~所示,In the absence of ligand, AhR is present in the cytosol in a complex with Hsp90, XAP2 and p23 proteins. Upon binding to a ligand, the AhR complex translocates into the nucleus and the AhR dissociates from Hsp90 complex to form a heterodimer with its partner molecule, Arnt. Thus, the formed AhR/Arnt heterodimer recognizes an enhancer DNA element designated xenobiotic responsive element (XRE) sequence located in the promoter region of CYP1A1gene, resulting in the enhanced expression of the gene[1].</p> |
- | < | + | <img id="Family" width="911px" height="682px" src="https://static.igem.org/mediawiki/2014/7/75/Design1.png"> |
+ | <p>Reference:[1] Functional role of AhR in the expression of toxic effects by TCDD</p> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | <div id="subtitle"> | ||
+ | <h5>lexA DBD/Mdr</h5> | ||
+ | </div> | ||
+ | <div class="paragraphs"> | ||
+ | <p>小鼠的AHR蛋白是由805个氨基酸序列组成,其中如图所示,包含bHLH (basic helix – loop – helix)、 PAS (Per – Arnt– Sim) domain、(A and B) PAS A and B repeats Q-rich (glutamine rich) region,其中PAS domain能够在hsp90存在的情况下与目标物质dioxin及其类似物结合并在ANRT的帮助下通过bHLH序列与DNA结合,诱导下游基因的表达。我们用lexA DBD蛋白将AHR的第1-82位的氨基酸换掉,使得融合的蛋白质能够与下游基因的增强子lexAoperator相结合,出发cyc1 promoter对下游黄色荧光蛋白的表达。从而使融合蛋白能够在酵母中起到对二噁英的检测功能。 | ||
</p> | </p> | ||
+ | |||
+ | <img id="Family" width="911px" height="682px" src="https://static.igem.org/mediawiki/2014/a/aa/Design2.png"> | ||
+ | <img id="Family" width="911px" height="682px" src="https://static.igem.org/mediawiki/2014/f/fd/Design3.png"> | ||
+ | |||
</div> | </div> | ||
<div id="subtitle"> | <div id="subtitle"> | ||
- | < | + | <h5>MEMORY SYSTEM</h5> |
</div> | </div> | ||
<div class="paragraphs"> | <div class="paragraphs"> | ||
- | <p> | + | <p>Here we add a rational design of cellular memory in yeast that employs autoregulatory transcriptional positive feedback .我们在表达的上述由二噁英诱导的黄色荧光蛋白后融合了lexAop及mdr521-805这段DNA绑定的辅助序列。通过这段基因序列的改造,装置在探测到二噁英分子后,就能快速大量的表达黄色荧光蛋白,并且由于正反馈的作用,当二噁英不存在后,装置仍能稳定的表达黄色荧光蛋白,实现了信号增强及记忆的功能。</p> |
+ | |||
+ | <img id="Family" width="911px" height="682px" src="https://static.igem.org/mediawiki/2014/3/34/Design4.png"> | ||
+ | |||
</div> | </div> | ||
+ | <div id="subtitle"> | ||
+ | <h5>DIOXIN DEGRADEE</h5> | ||
+ | </div> | ||
+ | |||
+ | <div id="subtitle"> | ||
+ | <h5>DIOXIN CONCENTRATION</h5> | ||
+ | </div> | ||
</div> | </div> | ||
Revision as of 16:32, 13 October 2014
Design
DIOXIN DETECTIVE
DIOXIN SENSOR
AhR RECEPTOR
AhR(arylhydrocarbon receptor)是在生命体内的二恶英及其类似物的结合受体,它能在二恶英的诱导下,通过膜转运与生物体内DNA相关序列结合,促使下游xenobiotic metabolizing enzymes(XMEs) 家族中的 CYP1A1 gene 表达,从而对生物体代谢进行不同程度的调控。 其具体的调控方式如图~所示,In the absence of ligand, AhR is present in the cytosol in a complex with Hsp90, XAP2 and p23 proteins. Upon binding to a ligand, the AhR complex translocates into the nucleus and the AhR dissociates from Hsp90 complex to form a heterodimer with its partner molecule, Arnt. Thus, the formed AhR/Arnt heterodimer recognizes an enhancer DNA element designated xenobiotic responsive element (XRE) sequence located in the promoter region of CYP1A1gene, resulting in the enhanced expression of the gene[1].
Reference:[1] Functional role of AhR in the expression of toxic effects by TCDD
lexA DBD/Mdr
小鼠的AHR蛋白是由805个氨基酸序列组成,其中如图所示,包含bHLH (basic helix – loop – helix)、 PAS (Per – Arnt– Sim) domain、(A and B) PAS A and B repeats Q-rich (glutamine rich) region,其中PAS domain能够在hsp90存在的情况下与目标物质dioxin及其类似物结合并在ANRT的帮助下通过bHLH序列与DNA结合,诱导下游基因的表达。我们用lexA DBD蛋白将AHR的第1-82位的氨基酸换掉,使得融合的蛋白质能够与下游基因的增强子lexAoperator相结合,出发cyc1 promoter对下游黄色荧光蛋白的表达。从而使融合蛋白能够在酵母中起到对二噁英的检测功能。
MEMORY SYSTEM
Here we add a rational design of cellular memory in yeast that employs autoregulatory transcriptional positive feedback .我们在表达的上述由二噁英诱导的黄色荧光蛋白后融合了lexAop及mdr521-805这段DNA绑定的辅助序列。通过这段基因序列的改造,装置在探测到二噁英分子后,就能快速大量的表达黄色荧光蛋白,并且由于正反馈的作用,当二噁英不存在后,装置仍能稳定的表达黄色荧光蛋白,实现了信号增强及记忆的功能。
DIOXIN DEGRADEE
DIOXIN CONCENTRATION
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