Team:Vanderbilt/Project

From 2014.igem.org

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By harnessing existing biosynthetic pathways and introducing enzymes taken from plants into more maleable model systems, it will be possible to significantly improve on current methods of the active components of essential oils, most notably the terpenoids. While most plants express terpenes in the range of parts per million and thus require very large scale operations to be commercially viable, early forays into the biological production of terpenes have proven that it is possible to improve yields 100-fold <sup>2</sup>. The first aspect of our project involves using the great potential of synthetic biology to design a commercially-viable strategy for the production of any class of terpenoid.
By harnessing existing biosynthetic pathways and introducing enzymes taken from plants into more maleable model systems, it will be possible to significantly improve on current methods of the active components of essential oils, most notably the terpenoids. While most plants express terpenes in the range of parts per million and thus require very large scale operations to be commercially viable, early forays into the biological production of terpenes have proven that it is possible to improve yields 100-fold <sup>2</sup>. The first aspect of our project involves using the great potential of synthetic biology to design a commercially-viable strategy for the production of any class of terpenoid.
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Just as important to the economic benefit of this approach is its environment benefit. With chemical terpene extraction being such a relatively inefficient process, it is necessary to process large amounts of plant material to get a substantive yield. This may not pose as significant of an issue for citrus growers, but  
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Just as important to the economic benefit of this approach is its environment benefit. With chemical terpene extraction being such a relatively inefficient process, it is necessary to process large amounts of plant material to get a substantive yield. This may not pose as significant of an issue for citrus growers, but many of the most prized compounds are taken from the rarest species of plant.
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<img src="https://static.igem.org/mediawiki/parts/f/f3/VU_Cadenine.png"width="200"  />
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<b>Cadenine</b><br><br>
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Main essential oil: Cade oil<br>
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Applications: Antifungal, bactericidal, and antioxidant<br>
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Results: Genomic DNA with gene successfully extracted from <i>Gossypium hirsutum</i>. cDNA failed to be PCR amplified.
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<img src="https://static.igem.org/mediawiki/parts/6/67/VU_Carene.png" width="200"  />
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<b>Carene</b><br><br>
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Main essential oils: Rosemary and Cedar oil<br>
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Applications: Insecticide, anti-inflammatory, and central nervous system depressant<br>
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Results: Genomic DNA with gene successfully extracted from <i>Picea abies</i>. cDNA failed to be PCR amplified.
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<td align="center" valign="center">
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<img src="https://static.igem.org/mediawiki/parts/1/13/VU_Humelene.png" width="200"  />
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<b>Humelene</b><br><br>
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Main essential oils: Hops oil<br>
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Applications: Culinary spice, and anti-inflamitory<br>
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Results: Genomic DNA with gene successfully extracted from <i>Zingiber zerumbet</i>. mRNA successfully reverse transcribed into cDNA. Extracted gene failed to be integrated into E. coli.
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<img src="https://static.igem.org/mediawiki/parts/6/68/VU_myrcene.png" width="200"  />
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<b>Myrcene</b><br><br>
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Main essential oils: Thyme and Hops oil <br>
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Applications: Fragrance, analgesic, and anti-inflamitory<br>
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Results: Genomic DNA with gene successfully extracted from <i>Perilla frutescens</i>. cDNA failed to be PCR amplified.
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<img src="https://static.igem.org/mediawiki/parts/7/7c/VU_R_linalool.png" width="200"  />
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<b>(R)-Linalool</b><br><br>
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Main essential oils: Lavender oil<br>
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Applications: Fragrance, and insecticide<br>
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Results: Genomic DNA with gene successfully extracted from <i>Mentha citrata</i>. cDNA failed to be PCR amplified.
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<img src="https://static.igem.org/mediawiki/parts/7/7a/VU_S_linalool.png" width="200"  />
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<b>(S)-Linalool</b><br><br>
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Main essential oils: Citrus and Coriander oil<br>
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Applications: Fragrance, and insecticide<br>
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Results: Genomic DNA with gene successfully extracted from <i>Arabidopsis thaliana</i>. cDNA failed to be PCR amplified.
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</td>
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<img src="http://yoursite.com/images/filename.jpg" width="200"  />
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Revision as of 01:41, 16 October 2014




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Introduction


The production of plant essential oils and their derivatives represents an over 9 billion dollar industry when considering just their applications in the food and fragrance industries 1. A staggering 23 million kilograms of citrus oil alone are produced worldwide each year. Up until only a couple decades ago, the production of these essential oils was done exclusively by chemical extraction from plant material. However, the sudden emergence of synthetic biology a versatile and efficient tool has the potential to transform this immense industry, the products of which nearly everyone will come in contact with on a daily basis.

By harnessing existing biosynthetic pathways and introducing enzymes taken from plants into more maleable model systems, it will be possible to significantly improve on current methods of the active components of essential oils, most notably the terpenoids. While most plants express terpenes in the range of parts per million and thus require very large scale operations to be commercially viable, early forays into the biological production of terpenes have proven that it is possible to improve yields 100-fold 2. The first aspect of our project involves using the great potential of synthetic biology to design a commercially-viable strategy for the production of any class of terpenoid.

Just as important to the economic benefit of this approach is its environment benefit. With chemical terpene extraction being such a relatively inefficient process, it is necessary to process large amounts of plant material to get a substantive yield. This may not pose as significant of an issue for citrus growers, but many of the most prized compounds are taken from the rarest species of plant.


Cadenine

Main essential oil: Cade oil
Applications: Antifungal, bactericidal, and antioxidant
Results: Genomic DNA with gene successfully extracted from Gossypium hirsutum. cDNA failed to be PCR amplified.

Carene

Main essential oils: Rosemary and Cedar oil
Applications: Insecticide, anti-inflammatory, and central nervous system depressant
Results: Genomic DNA with gene successfully extracted from Picea abies. cDNA failed to be PCR amplified.

Humelene

Main essential oils: Hops oil
Applications: Culinary spice, and anti-inflamitory
Results: Genomic DNA with gene successfully extracted from Zingiber zerumbet. mRNA successfully reverse transcribed into cDNA. Extracted gene failed to be integrated into E. coli.

Myrcene

Main essential oils: Thyme and Hops oil
Applications: Fragrance, analgesic, and anti-inflamitory
Results: Genomic DNA with gene successfully extracted from Perilla frutescens. cDNA failed to be PCR amplified.

(R)-Linalool

Main essential oils: Lavender oil
Applications: Fragrance, and insecticide
Results: Genomic DNA with gene successfully extracted from Mentha citrata. cDNA failed to be PCR amplified.

(S)-Linalool

Main essential oils: Citrus and Coriander oil
Applications: Fragrance, and insecticide
Results: Genomic DNA with gene successfully extracted from Arabidopsis thaliana. cDNA failed to be PCR amplified.

Caption text centered under the image.

Caption text centered under the image.

Caption text centered under the image.



References:
1. USDA Industrial Uses Reports. Essential Oils Widely Used in Flavors and Fragrances. September 1995.
2. Ajikumar PK, Tyo K, Carlsen S, Mucha O, Phon TH, Stephanopoulos G. Terpenoids: opportunities for biosynthesis of natural product drugs using engineered microorganisms. Mol Pharm. 2008;5(2):167-90.

Project Goals


Results and Directions

Sage plant, <i>Salvia officinalis</i>, growing in the Vanderbilt greenhouse Salvia officinalis, growing in the Vanderbilt greenhouse