Team:UESTC-China/Project

From 2014.igem.org

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So a more efficient and more low-carbon technology is in badly need to remove formaldehyde.
So a more efficient and more low-carbon technology is in badly need to remove formaldehyde.
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<p style="color:#1b1b1b;">As we all know that various plants can remove formaldehyde from indoor air by means of the uptake and metabolism <i>(Xu, Qin et al. 2010)</i>. It has been proved that formaldehyde as a central intermediate of photosynthetic carbon dioxide fixation in green plants can be removed by forming HM-GSH and finally turned to water and carbon dioxide (Fig.2A) . FALDH and FDH are the key enzymes for formaldehyde fixation. For the wild-type plants we know of now, they have limited capacity to metabolize formaldehyde and it's hard for them to survive in a high formaldehyde environment. At the same time, formaldehyde is also a key intermediate in the metabolism of several one-carbon (C1) compounds in methylotrophic microorganisms. Those microorganisms have a special metabolic pathway named ribulose monophosphate (RuMP) pathway (Fig.2B). 3-hexulose-6-phosphate (HPS) and 6-phospho-3-hexuloisomerase (PHI) are the key enzymes that affect the metabolism of formaldehyde. In the pathway, HPS fixes HCHO and D-ribulose-5-phosphate (Ru5P) to produce D-arabino-3-hexulose-6-phosphate (Hu6P), and 6-phospho-3-hexuloisomerase (PHI), which converts Hu6P to fructose-6-phosphate (F6P). Interestingly, Ru5P and F6P are also included in the Calvin-Benson cycle, so bacterial RuMP pathway and plant Calvin-Benson cycle can be connected if HPS and PHI can exist in plants.  
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<p style="color:#1b1b1b;">As we all know that various plants can remove formaldehyde from indoor air by means of the uptake and metabolism <i>(Xu, Qin et al. 2010)</i>. It has been proved that formaldehyde as a central intermediate of photosynthetic carbon dioxide fixation in green plants can be removed by forming HM-GSH and finally turned to water and carbon dioxide (Fig.2A) . FALDH and FDH are the key enzymes for formaldehyde fixation. For the wild-type plants we know of now, they have limited capacity to metabolize formaldehyde and it's hard for them to survive in a high formaldehyde environment. At the same time, formaldehyde is also a key intermediate in the metabolism of several one-carbon (C1) compounds in methylotrophic microorganisms. Those microorganisms have a special metabolic pathway named ribulose monophosphate (RuMP) pathway (Fig.2B). 3-hexulose-6-phosphate (HPS) and 6-phospho-3-hexuloisomerase (PHI) are the key enzymes that affect the metabolism of formaldehyde. In the pathway, HPS fixes formaldehyde and D-ribulose-5-phosphate (Ru5P) to produce D-arabino-3-hexulose-6-phosphate (Hu6P), and 6-phospho-3-hexuloisomerase (PHI), which converts Hu6P to fructose-6-phosphate (F6P). Interestingly, Ru5P and F6P are also included in the Calvin-Benson cycle, so bacterial RuMP pathway and plant Calvin-Benson cycle can be connected if HPS and PHI can exist in plants.  
If realized, the capacity of formaldehyde uptake and metabolism will be greatly advanced. In addition, the use of plants to remove toxins from the air is more likely to be accepted by the public.
If realized, the capacity of formaldehyde uptake and metabolism will be greatly advanced. In addition, the use of plants to remove toxins from the air is more likely to be accepted by the public.
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<p style="color:#1b1b1b;">We construct 11 different vectors including two backbones, six mono-gene expression vectors and three multi-gene expression vectors. The production of HPS, PHI, and FDH are located in chloroplast, while the production of FALDH are located in cytoplasm. We used chloroplast transit peptides to locate these productions of genes. So we constructed different vectors with and without transit peptide. We hope to compare the ability of metabolizing formaldehyde of transgenic tobacco between different transgenic lines. Those genes are inserted into tobacco via Agrobacterium-mediated leaf disk transformation method .At last, after DNA and RT-PCR detection, we got about 30 positive plants for each vector. Then qualitative detection and quantitative detection are used to explore whether our super plants have better ability of absorbing formaldehyde. From the experimental results, we can draw the conclusion that HCHO assimilation pathway and oxidative pathway super plant was strongly enhanced, and the super plant has remarkable formaldehyde tolerance and can dramatically reduce the concentration of formaldehyde in the air (Fig. 4). Due to the time limited, the activity of the four key enzymes in the formaldehyde metabolic pathway and whether the transit peptides can make a difference or not are currently being researched. How to let the gene AHA2 expresse in tobacco is what our future effort focus on.
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<p style="color:#1b1b1b;">We construct 11 different vectors including two backbones, six mono-gene expression vectors and three multi-gene expression vectors. The product of <i>HPS</i>, <i>PHI</i>, and <i>FDH</i> are located in chloroplast, while the product of <i>FALDH</i> are located in cytoplasm. We used chloroplast transit peptides to locate these productions of genes. So we constructed different vectors with and without transit peptide. We hope to compare the ability of metabolizing formaldehyde of transgenic tobacco between different transgenic lines. Those genes are inserted into tobacco via Agrobacterium-mediated leaf disk transformation method. At last, after DNA and RT-PCR detection, we got about 30 positive plants for each vector. Then qualitative detection and quantitative detection are used to explore whether our super plants have better ability of absorbing formaldehyde. From the experimental results, we can draw the conclusion that formaldehyde assimilation pathway and oxidative pathway super plant was strongly enhanced, and the super plant has remarkable formaldehyde tolerance and can dramatically reduce the concentration of formaldehyde in the air (Fig. 4). Due to the time limited, the activity of the four key enzymes in the formaldehyde metabolic pathway and whether the transit peptides can make a difference or not are currently being researched. How to let the gene AHA2 expresse in tobacco is what our future effort focus on.
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<div align="center"><img style="width:60%;" src="https://static.igem.org/mediawiki/2014/5/50/Over_fig.4.JPG"/></div>
<div align="center"><img style="width:60%;" src="https://static.igem.org/mediawiki/2014/5/50/Over_fig.4.JPG"/></div>

Revision as of 11:34, 17 October 2014

UESTC-China