Team:UCC Ireland/Project

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                <ul>
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<h1 >WELCOME TO iGEM 2014! </h1>
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                    <li><a style="margin:1px;">&equiv;</a>
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<p>Your team has been approved and you are ready to start the iGEM season!
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                        <ul>
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<br>On this page you can document your project, introduce your team members, document your progress <br> and share your iGEM experience with the rest of the world! </p>
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                            <li><a href="#section_projects" class="cbp-fbcurrent">Projects</a>
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<br>
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                            </li>
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<p style="color:#E7E7E7"> <a href="https://2014.igem.org/wiki/index.php?title=Team:UCC_Ireland/Project&action=edit"style="color:#FFFFFF"> Click here  to edit this page!</a> </p>
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                            <li><a href="#section_team">Team Picture</a>
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                            <li><a href="#sponsor">Sponsors</a>
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                            <li><a href="#bottom">Acknowledgements</a>
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                        <a href="https://igem.org/Main_Page"><img src="https://static.igem.org/mediawiki/2014/f/fb/Uccigem2014_igemlogo_big.jpg" /><b>|</b></a>
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                    </li>
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                        <a href="https://2014.igem.org/Team:UCC_Ireland"><img src="https://static.igem.org/mediawiki/2014/8/83/UCCiGEM_logo.jpg" /><b>UCC iGEM 2014</b></a>
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                    <li><a href="https://2014.igem.org/Team:UCC_Ireland">Home</a></li>
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                    <li>Projects
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                            <ul>
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                                <li><a href="https://2014.igem.org/Team:UCC_Ireland/Projects_SeaDNA.html">SeaDNA</a></li>
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                                <li><a href="https://2014.igem.org/Team:UCC_Ireland/Projects_SeeDNA.html">SeeDNA</a></li>
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                            </ul>
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                    </li>
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                    <li><a href="https://2014.igem.org/Team:UCC_Ireland/Team">Team</a></li>
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                    <li>Entrepreneurship
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                        <ul>
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                            <li><a href="https://2014.igem.org/Team:UCC_Ireland/Entre_Overview">Overview</a></li>
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                            <li><a href="https://2014.igem.org/Team:UCC_Ireland/Entre_SeaDNA">SeaDNA</a></li>
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                            <li><a href="https://2014.igem.org/Team:UCC_Ireland/Entre_SeeDNA">SeeDNA</a></li>
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                            <li><a href="https://2014.igem.org/Team:UCC_Ireland/Entre_Practice_Outreach.html">Practice and Outreach</a></li>
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                        </ul>
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                    </li>
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                    <li>Notebook
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                        <ul>
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                            <li><a href="https://2014.igem.org/Team:UCC_Ireland/Notebook_SeaDNA">SeaDNA</a></li>
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                            <li><a href="https://2014.igem.org/Team:UCC_Ireland/Notebook_SeeDNA">SeeDNA</a></li>
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                            <li><a href="https://igem.org/Safety/Safety_Form?team_id=1518">Safety Form</a></li>
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                        </ul>
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                    </li>
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                    <li><a href="https://2014.igem.org/Team:UCC_Ireland/OurLab_Main">Our Lab</a></li>
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<a href="https://2014.igem.org/Team:UCC_Ireland"style="color:#000000">Home </a> </td>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Team"style="color:#000000"> Team </a> </td>
 
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<a href="https://igem.org/Team.cgi?year=2014&team_name=UCC_Ireland"style="color:#000000"> Official Team Profile </a></td>
 
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<a href="https://2014.igem.org/Team:UCC_Ireland/Project"style="color:#000000"> Project</a></td>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Modeling"style="color:#000000"> Modeling</a></td>
 
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<a href="https://2014.igem.org/Team:UCC_Ireland/Notebook"style="color:#000000"> Notebook</a></td>
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            <a href="#section_projects" class="cbp-fbcurrent">Section 1</a>
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            <a href="#section_team">Section 2</a>
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            <a href="#sponsor">Section 3</a>
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            <a href="#bottom">Section 4</a>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Safety"style=" color:#000000"> Safety </a></td>
 
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<a href="https://2014.igem.org/Team:UCC_Ireland/Attributions"style="color:#000000"> Attributions </a></td>
 
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        <section id="section_projects" style="padding-top:25px;">
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            <div class="center">
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<td align ="center"> <a href="https://2014.igem.org/Main_Page"> <img src="https://static.igem.org/mediawiki/igem.org/6/60/Igemlogo_300px.png" width="55px"></a> </td>
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                <div class="col1">
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                    <a href="https://2014.igem.org/Team:UCC_Ireland/Projects_SeaDNA.html">
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</table>
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                    <div class="center2" style="border-radius:125px; width:250px; height:250px; background-image:url(https://static.igem.org/mediawiki/2014/b/b3/Seadna_icon1.png)">
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                    </a>
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                </div>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Projects_SeaDNA.html">
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                <div class="col2">
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<tr> <td colspan="3"  height="15px"> </td></tr>
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                    <h1>SeaDNA</h1>
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                    <p>Create cell “factories” that mass-produce a biopolymer that is found naturally in the slime of the hagfish. The exciting properties of this biopolymer indicate that it will have many potential applications in the food, medical devices, and textile industries.</p>
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<tr> <td colspan="3" height="5px"> </td></tr>
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                </div>
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</a>
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            </div>
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            <!--<div class="horzpad"></div>-->
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<!--Project content  -->
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            <div class="row">
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<tr><td > <h3> Project Description </h3></td>
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<td ></td >
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<td > <h3> Content</h3></td>
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</tr>
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<tr>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Projects_SeeDNA.html">
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<td width="45%" valign="top">
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                <div class="col2" style="background-color:#43C13C">
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<p>Tell us more about your project.  Give us background.  Use this as the abstract of your project.  Be descriptive but concise (1-2 paragraphs) </p>
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<br>
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<h3>References </h3>
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<p>
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iGEM teams are encouraged to record references you use during the course of your research. They should be posted somewhere on your wiki so that judges and other visitors can see how you though about your project and what works inspired you. </p>
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</td>
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<td></td>
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                    <h1>SeeDNA</h1>
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<td  width="45%"  valign="top">
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                    <p>Development of a novel method for DNA-based diagnostics using bacterial detection of target DNA sequences such as the Human Papillomavirus. We foresee applications for this in healthcare settings in resource-poor, developing countries.</p>
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<p> You can use these subtopics to further explain your project</p>
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                </div>
 +
</a>
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<ol>
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                <div class="col1">
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<li>Overall project summary</li>
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                    <a href="https://2014.igem.org/Team:UCC_Ireland/Projects_SeeDNA.html">
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<li>Project Details</li>
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                    <div class="center2" style="border-radius:125px; width:250px; height:250px; background-image:url(https://static.igem.org/mediawiki/2014/c/c9/SeeDNA_bigeye.jpg)">
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<li>Materials and Methods</li>
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                    </div>
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<li>The Experiments</li>
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                        </a>
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<li>Results</li>
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                </div>
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<li>Data analysis</li>
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<li>Conclusions</li>
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</ol>
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<p>
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It's important for teams to describe all the creativity that goes into an iGEM project, along with all the great ideas your team will come up with over the course of your work.
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</p>
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<p>
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It's also important to clearly describe your achievements so that judges will know what you tried to do and where you succeeded. Please write your project page such that what you achieved is easy to distinguish from what you attempted.
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</p>
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</td>
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</tr>
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            </div>
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            </div>
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        </section>
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</table>
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        <section id="section_team" style="background-image: url(https://static.igem.org/mediawiki/2014/2/2f/Ucc2014_team_labback_h800px.jpg)">
 +
            <div class="center">
 +
            <a class="ourteam" href="https://2014.igem.org/Team:UCC_Ireland/Team" title=" Meet Our Team"><h1 style="border-bottom:none;color:white">Meet Our Team</h1></a>
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                </div>
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        </section>
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        <section id="sponsor" class="sponsor">
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            <div class="sponsortitle"><h1>Sponsors</h1></div>
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            <div class="sponsor">
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                <a href="http://www.sosventures.com/"><div class="sponsor_col"><span class="helper"></span>
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                    <img class="sponsor" src="https://static.igem.org/mediawiki/2014/d/d0/Sosventures_logo.png" /></div></a>
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                <a href="http://www.ucc.ie/en/sefs/"><div class="sponsor_col"><span class="helper"></span>
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                    <img class="sponsor" src="https://static.igem.org/mediawiki/2014/3/3e/Ccucc_sefsbig_cut.jpg" /></div></a>
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                <a href="http://www.ucc.ie/en/biochemistry/"><div class="sponsor_col"><span class="helper"></span>
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                    <img class="sponsor" src="https://static.igem.org/mediawiki/2014/7/7a/Ucc_biochemistry_logo.jpg" /></div></a>
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 +
                <a href="http://www.janssen.ie/"><div class="sponsor_col"><span class="helper"></span>
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                    <img class="sponsor" src="https://static.igem.org/mediawiki/2014/4/47/Janssen_logo.jpg" /></div></a>
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                <a href="https://www.lilly.ie/"><div class="sponsor_col"><span class="helper"></span>
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                    <img class="sponsor" src="https://static.igem.org/mediawiki/2014/1/1d/Lilly_logo_red_back.jpg" /></div></a>
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            </div>
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        </section>
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 +
        <section class="acknowledgements" id="bottom">
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 +
 
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        <div>
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            <h1>Acknowledgments</h1>
 +
 
 +
            <ul>
 +
               
 +
                <li><b>Noreen Casey and Jenny Duane, Technical staff in the School of Biochemistry and Cell Biology, University College Cork.</b>
 +
-
 +
Provided training in biochemistry and molecular biology techniques throughout the summer. 
 +
                </li>
 +
                <li><b>Cabrillo Marine Aquarium
 +
San Pedro, CA 90731, USA</b> - Procuring and providing us with natural hagfish slime.</li>
 +
                <li><b>Dr. Patrick Harrison, Dept of Physiology, University College Cork</b> -
 +
Advice on SeeDNA project.
 +
                </li>
 +
 
 +
                <li><b>Dr. Justin McCarthy, School of Biochemistry and Cell Biology, University College Cork</b> -
 +
Advice on fundraising (among other things)
 +
                </li>
 +
                <li><b>Dr. Maryanne Donovan and Dr. Tanya Mulcahy
 +
                </b>-
 +
Assistance and advice with shooting a video pitch.
 +
.</li>
 +
 
 +
                <li><b>Prof. David Sheehan, Head of School of Biochemistry and Cell Biology, University College Cork.
 +
                </b>-
 +
Generous provision of lab space and technical support, as well as help with raising funds.
 +
                </li>
 +
 
 +
                <li><b>Dr. Douglas Fudge, Dept of Integrative Biology, University of Guelph, Canada
 +
                </b>-
 +
For sharing unpublished data on attempts to produce hagfish intermediate filament genes in bacteria.  Also for publishing many studies on which we have based our SeaDNA project.
 +
                </li>
 +
 
 +
                <li><b>Dr. Pasha Baranov, School of Biochemistry and Cell Biology, University College Cork </b> - Provided bioinformatics and target sequence advice for SeeDNA project.
 +
                </li>
 +
 
 +
                <li><b>Daniel James, Genetics program, University College Cork. 
 +
                </b>-
 +
Optimization experiments for SeeDNA.
 +
                </li>
 +
 
 +
 
 +
                <li>
 +
                    <b>Professor Mick Morris and Doctor Eoin Flynn, Materials Department University College Cork.
 +
                    </b>-
 +
Advice on polymerization of components and production of IF threads, membranes and meshes.
 +
 
 +
                </li>
 +
 
 +
                <li>
 +
                    <b>Jacob Schiach, Bill Liao plus all the mentors and other teams participants in the inaugural Synbioaxlr8r program at University College Cork.
 +
                    </b>-
 +
Business advice and mentorship, plus some choice euphemisms.
 +
                </li>
 +
 
 +
                <li><b>Patrick Breen and Brendan O’Leary</b>
 +
- For helping us make the videos needed to get funding and recording our business plan.</li>
 +
 
 +
                <li><b>Mary Heapes, School of Biochemistry and Cell Biology, University College Cork.
 +
                </b>- Photography</li>
 +
 
 +
                <li><b>Eoin Gubbins</b> - Writing the Irish Examiner article about the UCC iGEM team. </li>
 +
            </ul>
 +
        </div>
 +
    </section>
 +
 
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    </div>
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    <section class="footer">
 +
        <ul class="footer">
 +
            <!-- List Items in Reverse Order -->
 +
            <li class="footer"><a href="#section_projects" class="cbp-fbcurrent">Up to Top</a></li>
 +
            <li class="footer">UCC iGEM 2014</li>
 +
            <li class="footer">uccigem2014@gmail.com</li>
 +
        </ul>
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    </section>
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    <script src="https://ajax.googleapis.com/ajax/libs/jquery/1.9.1/jquery.min.js"></script>
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                $('#slideshow > div:first')
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Latest revision as of 10:53, 17 October 2014

Acknowledgments

  • Noreen Casey and Jenny Duane, Technical staff in the School of Biochemistry and Cell Biology, University College Cork. - Provided training in biochemistry and molecular biology techniques throughout the summer.
  • Cabrillo Marine Aquarium San Pedro, CA 90731, USA - Procuring and providing us with natural hagfish slime.
  • Dr. Patrick Harrison, Dept of Physiology, University College Cork - Advice on SeeDNA project.
  • Dr. Justin McCarthy, School of Biochemistry and Cell Biology, University College Cork - Advice on fundraising (among other things)
  • Dr. Maryanne Donovan and Dr. Tanya Mulcahy - Assistance and advice with shooting a video pitch. .
  • Prof. David Sheehan, Head of School of Biochemistry and Cell Biology, University College Cork. - Generous provision of lab space and technical support, as well as help with raising funds.
  • Dr. Douglas Fudge, Dept of Integrative Biology, University of Guelph, Canada - For sharing unpublished data on attempts to produce hagfish intermediate filament genes in bacteria. Also for publishing many studies on which we have based our SeaDNA project.
  • Dr. Pasha Baranov, School of Biochemistry and Cell Biology, University College Cork - Provided bioinformatics and target sequence advice for SeeDNA project.
  • Daniel James, Genetics program, University College Cork. - Optimization experiments for SeeDNA.
  • Professor Mick Morris and Doctor Eoin Flynn, Materials Department University College Cork. - Advice on polymerization of components and production of IF threads, membranes and meshes.
  • Jacob Schiach, Bill Liao plus all the mentors and other teams participants in the inaugural Synbioaxlr8r program at University College Cork. - Business advice and mentorship, plus some choice euphemisms.
  • Patrick Breen and Brendan O’Leary - For helping us make the videos needed to get funding and recording our business plan.
  • Mary Heapes, School of Biochemistry and Cell Biology, University College Cork. - Photography
  • Eoin Gubbins - Writing the Irish Examiner article about the UCC iGEM team.