Team:UCC Ireland

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                        <a href="https://2014.igem.org/Team:UCC_Ireland"><img src="https://static.igem.org/mediawiki/2014/8/83/UCCiGEM_logo.jpg" /><b>UCC iGEM 2014</b></a>
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<h1 >WELCOME TO iGEM 2014! </h1>
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<p>Your team has been approved and you are ready to start the iGEM season!
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<br>On this page you can document your project, introduce your team members, document your progress <br> and share your iGEM experience with the rest of the world! </p>
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<br>
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<p style="color:#E7E7E7"> <a href="https://2014.igem.org/wiki/index.php?title=Team:UCC_Ireland&action=edit"style="color:#FFFFFF"> Click here  to edit this page!</a> </p>
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                <ul class="right">
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                    <li>Home</li>
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<tr>  
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                    <li>Projects
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                            <ul>
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                                <li><a href="#section_projects" class="cbp-fbcurrent">SeaDNA</a>
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                                </li>
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                                <li><a href="#section_team">SeeDNA</a>
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                                </li>
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                            </ul>
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                    </li>
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                    <li>Team
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                            <ul>
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                                <li>Team Members</li>
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                                <li>Attributions</li>
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                            </ul>
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                    </li>
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                    <li>Entrepreneurship</li>
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                    <li>Notebook</li>
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                    <li>Our Lab</li>
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                <div class="right">
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                    <h1>Ian Valentine Mc Dermott</h1>
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                    <h2>3rd Biochemistry</h2>
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                    <ul>
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                        <li>Cloning</li>
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                        <li>Assisting with recombinant hagfish protein expression and isolation</li>
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                        <li>Construction of thread (ɑ and 𝛾 subunits) Biobricks</li>
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                    </ul>
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                </div>
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            </div>
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            <div id="2" style="background-image: url(https://static.igem.org/mediawiki/2014/b/b7/Uccigem2014_tim_full_h800px.jpg); background-position: center top;">
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                    <h1>Timothy O'Flynn</h1>
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                    <h2>3rd Genetics</h2>
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                    <ul>
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                        <li>Cloning plasmid</li>
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                        <li>Isolating subunits</li>
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                        <li>Bullying Ian</li>
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                        <li>Growing Bacterial Cultures</li>
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                        <li>Analysing the Data</li>
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                    </ul>
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                </div>
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                    <h1>Gavin King</h1>
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                    <h2>3rd Biochemistry</h2>
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                    <ul>
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                        <li>Identification of potential HPV16 target sequences</li>
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                        <li>Evaluating methods of producing HPV16 detector plasmid</li>
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                        <li>Phosphorylation of HPV16 target sequences and primers</li>
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                        <li>Annealing of phosphorylated HPV16 target sequence strands</li>
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                        <li>Assisted in cloning HPV16 detector into pSB1C3 plasmid</li>
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                    </ul>
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                </div>
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            <div id="4" style="background-image: url(https://static.igem.org/mediawiki/2014/5/5e/Uccigem2014_dan_full_h800px.jpg)">
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                <div class="left" style="color: white">
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                    <h1>Dan Collins</h1>
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                    <h2>3rd Genetics</h2>
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                    <ul>
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                        <li>Identification of potential HPV16 target sequences</li>
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                        <li>Evaluating methods of producing HPV16 detector plasmid</li>
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                        <li>Assisted in cloning HPV16 detector into pSB1C3 plasmid</li>
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                    </ul>
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                </div>
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            </div>
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                    <h1>Russell Banta</h1>
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                    <h2>3rd Material Chemistry</h2>
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                    <ul>
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                        <li>Solubility studies on natural threads</li>
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                        <li>SEM, AFM, Microscopy (natural + synthetic)</li>
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                        <li>Isolation + polymerisation of subunits</li>
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                        <li>Development of threads from synthetic and natural proteins</li>
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                        <li>Initial development of upscaling production to feasible yields</li>
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                    </ul>
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                    <h1>Shama Chilakwad</h1>
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                    <h2>3rd Genetics</h2>
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                    <ul>
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                        <li>Preparing the plasmids for cloning</li>
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                        <li>Amplifying hagfish DNA</li>
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                        <li>Cloning and expression of the hagfish proteins</li>
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                        <li>Growing bacterial cultures </li>
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                        <li>Analysing all the data gathered for the SeaDNA project</li>
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<a href="https://2014.igem.org/Team:UCC_Ireland"style="color:#000000">Home </a> </td>
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                    <h1>Leanne O'Sullivan</h1>
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                    <h2>2nd Biomedical Sciences</h2>
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                    <ul>
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                        <li>Assisting in constructing SeeDNA detector prototypes</li>
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                        <li>Evaluating SeeDNA detecting ability with chosen targets</li>
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                        <li>Evaluating antimicrobial properties of natural hagfish slime</li>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Team"style="color:#000000"> Team </a> </td>
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            </div>
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            <div id="8" style="background-image: url(https://static.igem.org/mediawiki/2014/c/c0/Uccigem2014_patrick_full_h800px.jpg)">
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                    <h1>Patrick Xie</h1>
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                    <h2>4th Engineer</h2>
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                    <ul>
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                        <li>Website Creation</li>
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                        <li>Lab Assistant</li>
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                        <li>Conducting chemical experiments on natural protein</li>
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                        <li>Development of homemade spin coater</li>
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<a href="https://igem.org/Team.cgi?year=2014&team_name=UCC_Ireland"style="color:#000000"> Official Team Profile </a></td>
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            </div>
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            <div id="9" style="background-image: url(https://static.igem.org/mediawiki/2014/f/f2/Uccigem2014_cian_full_h800px.jpg); background-position: center top;">
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                <div class="right" style="color: white">
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                    <h1>Cian O'Donnell</h1>
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                    <h2>1st Biochemistry</h2>
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                    <ul>
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                        <li>Assisting with hagfish protein expression and isolation</li>
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                        <li>Growing bacterial cultures</li>
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                        <li>Researching and conducting chemical experiments on natural protein</li>
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                        <li>Russells Psychologist </li>
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                    </ul>
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            <div id="10" style="background-image: url(https://static.igem.org/mediawiki/2014/c/c0/Uccigem2014_paul_full_h800px.jpg); background-position: center top;">
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<a href="https://2014.igem.org/Team:UCC_Ireland/Project"style="color:#000000"> Project</a></td>
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                <div class="right" style="color: black">
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                    <h1>Dr. Paul Young</h1>
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                    <h2>Academic Supervisor</h2>
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            <div id="11" style="background-image: url(https://static.igem.org/mediawiki/2014/5/56/Uccigem2014_tommie_full_h800px.jpg); background-position: center top;">
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<a href="https://2014.igem.org/Team:UCC_Ireland/Parts"style="color:#000000"> Parts</a></td>
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                <div class="left" style="color: black">
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                    <h1>Prof. Tommy Mc Carthy</h1>
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                    <h2>Academic Supervisor</h2>
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                </div>
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        </div>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Modeling"style="color:#000000"> Modeling</a></td>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Notebook"style="color:#000000"> Notebook</a></td>
 
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<a href="https://2014.igem.org/Team:UCC_Ireland/Safety"style=" color:#000000"> Safety </a></td>
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<a href="https://2014.igem.org/Team:UCC_Ireland/Attributions"style="color:#000000"> Attributions </a></td>
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                    <img src="https://static.igem.org/mediawiki/2014/1/1a/Uccigem2014_timothy_thumbnail_h120px_w65px.png" /></a></li>
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                    <img src="https://static.igem.org/mediawiki/2014/2/21/Uccigem2014_gav_thumbnail_h120px_w65px.png" /></a></li>
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                    <img src="https://static.igem.org/mediawiki/2014/4/4e/Uccigem2014_dan_thumbnail_h120px_w65px.png" /></a></li>
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                    <img src="https://static.igem.org/mediawiki/2014/e/ef/Uccigem2014_russell_thumbnail_h120px_w65px.png" /></a></li>
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                <li><a href="#6" id ="p6">
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                    <img src="https://static.igem.org/mediawiki/2014/8/85/Uccigem2014_shama_thumbnail_h120px_w65px.png" /></a></li>
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                <li><a href="#7" id ="p7">
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                    <img src="https://static.igem.org/mediawiki/2014/4/4d/Uccigem2014_leanne_thumbnail_h120px_w65px.png" /></a></li>
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                <li><a href="#8" id ="p8">
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                    <img src="https://static.igem.org/mediawiki/2014/c/cf/Uccigem2014_patrick_thumbnail_h120px_w65px.png" /></a></li>
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                <li><a href="#9" id ="p9">
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                    <img src="https://static.igem.org/mediawiki/2014/f/f9/Uccigem2014_cian_thumbnail_h120px_w65px.png" /></a></li>
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                <li><a href="#10" id ="p10">
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                    <img src="https://static.igem.org/mediawiki/2014/8/8b/Uccigem2014_paul_head_h120px_w65px.jpg" /></a></li>
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                <li><a href="#11" id ="p11">
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                    <img src="https://static.igem.org/mediawiki/2014/6/65/Uccigem2014_tommie_head_h120px_w65px.jpg" /></a></li>
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            </ul>
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<p> Please be sure to keep these links, your audience will want to find your: </p>
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<!-- Links to other team pages -->
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<ul>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland">Home</a> </li>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland/Team">Team</a> </li>
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<li><a href="https://igem.org/Team.cgi?year=2013&team_name=UCC_Ireland">Official Team Profile</a> </li>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland/Project">Project</a> </li>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland/Parts">Parts</a> </li>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland/Modeling">Modeling</a> </li>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland/Notebook">Notebook</a> </li>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland/Safety">Safety</a> </li>
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<li><a href="https://2014.igem.org/Team:UCC_Ireland/Attributions">Attributions</a> </li>
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<td > </td>
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<p>There are a few wiki requirements teams must follow:</p>
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<ul>
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<li>All pages, images and files must be hosted on the <a href ="https://2014.igem.org/Special:Upload">  2014.igem.org server</a>. </li>
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<li>All pages must be created under the team’s name space.</li>
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<li>As part of your documentation, keep the links from the menu to the left. </li>
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<li>Do not use flash in wiki code. </li>
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<li>The <a href="https://static.igem.org/mediawiki/igem.org/6/60/Igemlogo_300px.png"> iGEM logo </a> should be placed on the upper part of every page and should link to <a href="https://2014.igem.org/Main_Page">2014.igem.org</a>.</li>
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</ul>
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<p>Visit the <a href="https://2014.igem.org/Wiki_How-To"> Wiki How To page </a> for a complete list of requirements, tips and other useful information. </p>
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<tr> <td colspan="3"  height="15px"> </td></tr>
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<tr><td bgColor="#e7e7e7" colspan="3" height="1"> </tr>
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<!--tips  -->
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<tr><td colspan="3" > <h3> Tips  </h3></td></tr>
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<td width="45%" valign="top">
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<p>We are currently working on providing teams with some easy to use design templates.
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<br> In the meantime you can also view other team wikis for inspiration! Here are some very good examples</p>
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<ul>
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<li> <a href="https://2013.igem.org/Team:SDU-Denmark/"> 2013 SDU Denmark </a> </li>
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<li> <a href="https://2013.igem.org/Team:SYSU-China">2013 SYSU China</a> </li>
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<li> <a href="https://2013.igem.org/Team:Shenzhen_BGIC_ATCG"> 2013 Shenxhen BGIG ATCG </a></li>
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<li> <a href="https://2013.igem.org/Team:Colombia_Uniandes">2013 Colombia Unianades </a></li>
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<li> <a href="https://2013.igem.org/Team:Lethbridge">2013 Lethbridge</a></li>
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</ul>
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<p>For a full wiki list, you can visit <a href="https://igem.org/Team_Wikis?year=2013">iGEM 2013 web sites </a> and <a href="https://igem.org/Team_Wikis?year=2012">iGEM 2012 web sites</a>  lists. </p>
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</td>
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<td> </td>
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<td width="45%">
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<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
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<ul>
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<li>State your accomplishments! Tell people what you have achieved from the start. </li>
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<li>Be clear about what you are doing and what you plan to do.</li>
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<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
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<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
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<li>Avoid using very small fonts and low contrast colors; information should be easy to read.  </li>
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<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="">iGEM 2013 calendar</a> </li>
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<li>Have lots of fun! </li>
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</ul>
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</br>
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</td>
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</tr>
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</table>
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Revision as of 15:45, 13 October 2014

Ian Valentine Mc Dermott

3rd Biochemistry

  • Cloning
  • Assisting with recombinant hagfish protein expression and isolation
  • Construction of thread (ɑ and 𝛾 subunits) Biobricks

Timothy O'Flynn

3rd Genetics

  • Cloning plasmid
  • Isolating subunits
  • Bullying Ian
  • Growing Bacterial Cultures
  • Analysing the Data

Gavin King

3rd Biochemistry

  • Identification of potential HPV16 target sequences
  • Evaluating methods of producing HPV16 detector plasmid
  • Phosphorylation of HPV16 target sequences and primers
  • Annealing of phosphorylated HPV16 target sequence strands
  • Assisted in cloning HPV16 detector into pSB1C3 plasmid

Dan Collins

3rd Genetics

  • Identification of potential HPV16 target sequences
  • Evaluating methods of producing HPV16 detector plasmid
  • Assisted in cloning HPV16 detector into pSB1C3 plasmid

Russell Banta

3rd Material Chemistry

  • Solubility studies on natural threads
  • SEM, AFM, Microscopy (natural + synthetic)
  • Isolation + polymerisation of subunits
  • Development of threads from synthetic and natural proteins
  • Initial development of upscaling production to feasible yields

Shama Chilakwad

3rd Genetics

  • Preparing the plasmids for cloning
  • Amplifying hagfish DNA
  • Cloning and expression of the hagfish proteins
  • Growing bacterial cultures
  • Analysing all the data gathered for the SeaDNA project

Leanne O'Sullivan

2nd Biomedical Sciences

  • Assisting in constructing SeeDNA detector prototypes
  • Evaluating SeeDNA detecting ability with chosen targets
  • Evaluating antimicrobial properties of natural hagfish slime

Patrick Xie

4th Engineer

  • Website Creation
  • Lab Assistant
  • Conducting chemical experiments on natural protein
  • Development of homemade spin coater

Cian O'Donnell

1st Biochemistry

  • Assisting with hagfish protein expression and isolation
  • Growing bacterial cultures
  • Researching and conducting chemical experiments on natural protein
  • Russells Psychologist

Dr. Paul Young

Academic Supervisor

Prof. Tommy Mc Carthy

Academic Supervisor

Retrieved from "http://2014.igem.org/Team:UCC_Ireland"