Team:TCU Taiwan/Notebook

From 2014.igem.org

(Difference between revisions)
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         <h6 align="left"><font face="Trebuchet MS" size="6" color="#A66B38">Week 1</font><font face="Trebuchet MS" size="6" color="#90B849"> 6/22~6/28</font></h6>
         <h6 align="left"><font face="Trebuchet MS" size="6" color="#A66B38">Week 1</font><font face="Trebuchet MS" size="6" color="#90B849"> 6/22~6/28</font></h6>
         <div align="left">
         <div align="left">
-
           <p><h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5><br><font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
           <p><h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5><br>
 +
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell.</font>
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
           Transformation ( Cas9 in pSB1C3 into DH5α)<br>Incubate DH5α with pSB1C3</font></p>
           Transformation ( Cas9 in pSB1C3 into DH5α)<br>Incubate DH5α with pSB1C3</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font>          </p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α.</font>          </p>
-
           <p><h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5><br><font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>Practice presentation<br>Design gRNA for AmpR<br>
+
           <p><h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5><br>
-
           Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt).<br>
-
           Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font></p>
+
          Practice presentation.<br>
 +
          Design gRNA for AmpR.<br>
 +
           Discuss about project. Project Name is E.Maat for now (came up by Sharon).<br>
 +
           Order restraction enzyme(PstI、EcoRI、XbaI、SpeI). </font></p>
         </div>
         </div>
          
          
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           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <p><br>
           <p><br>
-
             <font face="Trebuchet MS" size="4" color="#333"><li></li>Extract plasmid pSB1C3 with BBa_I13521、BBa_ K914003、BBa_ K1218011</font></p>
+
             <font face="Trebuchet MS" size="4" color="#333">Extract plasmid pSB1C3 with BBa_I13521、BBa_ K914003、BBa_ K1218011</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333"><li></li>Prepare Cm. plate、LB. plate </font>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Prepare Cm. plate、LB. plate </font>
             </p>
             </p>
           </p>
           </p>
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         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Incubate E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )</font></p>
-
          <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract pSB1C3 BBa_I13521、BBa_ K914003、BBa_ K1218011 </font>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
            </p>
-
            Incubate DH5α with pSB1C3</font></p>
+
          </p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
           <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Final Theme decided: Trogene Horse</font></p>
-
           Practice presentation<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Prepare for igem conference in NCTU-Formosa (ppt)</font></p>
-
           Design gRNA for AmpR<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333"> Designing team logo and project logo</font></p>
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">House started working on wiki</font></p>
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Decided to have a synthetic biology contest in National Hualien Girls’ Senior High School </font></p>
           </p>
           </p>
         </div>
         </div>
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         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Incubate:</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">2. E.coli top10 with pBluescript II SK (-)</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
          <p>&nbsp;</p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract :</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">2. pBluescript</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted. </font>
 +
            </p>
 +
          </p>
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Prepare for igem conference in NCTU-Formosa (ppt)
-
           Practice presentation<br>
+
            </font></p>
-
           Design gRNA for AmpR<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333"> Designing team logo and project logo</font></p>
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">House working on wiki construction</font></p>
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Prepare for the contest in National Hualien Girls’ Senior High School (ppt)</font></p>
           </p>
           </p>
         </div>
         </div>
Line 327: Line 335:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Incubate:</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">2. E.coli top10 with pBluescript II SK (-)</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
          <p>&nbsp;</p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract :</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">2. pBluescript</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted. </font>
 +
            </p>
 +
          </p>
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Prepare for igem conference in NCTU-Formosa (ppt).
-
           Practice presentation<br>
+
            </font></p>
-
           Design gRNA for AmpR<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333"> Have a synthetic biology contest in National Hualien Girls’ Senior High School.</font></p>
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Order primer for gRNA
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
            team logo and project logo confirmed. </font></p>
           </p>
           </p>
         </div>
         </div>
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         <h6 align="left"><font face="Trebuchet MS" size="6" color="#A66B38">Week 7</font><font face="Trebuchet MS" size="6" color="#90B849"> 8/3~8/7</font></h6>
         <h6 align="left"><font face="Trebuchet MS" size="6" color="#A66B38">Week 7</font><font face="Trebuchet MS" size="6" color="#90B849"> 8/3~8/7</font></h6>
         <div align="left">
         <div align="left">
-
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
+
           <h5><font face="Trebuchet MS" size="4" color="#E72B33">Attending iGEM conference in NCTU-Formosa </font>
-
          <br>
+
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
-
          <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
-
            Incubate DH5α with pSB1C3</font></p>
+
-
          <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
-
          <p>         
+
-
          <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
+
-
          <br>
+
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
-
          Practice presentation<br>
+
-
          Design gRNA for AmpR<br>
+
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
           </p>
           </p>
         </div>
         </div>
Line 367: Line 366:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Incubate:</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">2. E.coli top10 with pBluescript II SK (-)</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
          <p>&nbsp;</p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract :</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">2. pBluescript</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted</font>.</p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Purification of RFP sequence from pSB1C3
 +
            Prepare Cm. plate、LB. plate</font></p>
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <br>
           <br>
-
           <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
           <font face="Trebuchet MS" size="4" color="#333">Team uniform under design. </font>
-
          Practice presentation<br>
+
            
-
          Design gRNA for AmpR<br>
+
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
-
           </p>
+
         </div>
         </div>
          
          
Line 387: Line 387:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Incubate:</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">2. E.coli top10 with pBluescript II SK (-)</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract :</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011</font></p>
-
           <p>        
+
           <p><font face="Trebuchet MS" size="4" color="#333">2. pBluescript</font></p>
-
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted.</font></p>
-
           <br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Purification of RFP sequence from pSB1C3. </font>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            </p>
-
          Practice presentation<br>
+
         
-
           Design gRNA for AmpR<br>
+
         
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
-
          </p>
+
         </div>
         </div>
          
          
Line 407: Line 404:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Ligation of RFP and pBluescript SK(-)</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Transformation clone RFP/pBluescript SK(-) to DH5α</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333"> Extract plasmid clone RFP/pBluescript SK(-)</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted. </font>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
            </p>
 +
          </p>
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
           <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Design badge as small gift</font></p>
-
          Practice presentation<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Order Helper phage for pBluescript SK(-)</font></p>
-
           Design gRNA for AmpR<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Make movie for project introduction of Trogene horse</font>.</p>
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Prepare iGEM presentation ppt、poster. </font></p>
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
           </p>
           </p>
         </div>
         </div>
Line 427: Line 424:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Incubate:</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">1. E.coli DH5α with BBa_I13521、(in pSB1C3 )</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">2. E.coli top10 with pBluescript II SK (-)</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract :</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
          <p><font face="Trebuchet MS" size="4" color="#333">1. pSB1C3: BBa_I13521</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">2. pBluescript</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Purification of RFP sequence from pSB1C3</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Ligation Clone RFP/pBluescript SK(-)to DH5α
 +
            Store BBa_I13521、BBa_ K914003、BBa_ K1218011、clone RFP/pBluescript SK(-) </font>
 +
            </p>
 +
          </p>
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Make movie for project introduction of Trogene</font>.</p>
-
          Practice presentation<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333"> horse
-
           Design gRNA for AmpR<br>
+
            Prepare iGEM presentation ppt、poster. </font></p>
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
           </p>
           </p>
         </div>
         </div>
Line 447: Line 449:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Ligation Clone RFP/pBluescript SK(-)</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid clone RFP/pBluescript SK(-)</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Modeling for phage injection (Thanks for NCTU-Formosa’s help)</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <br>
           <br>
-
           <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
           <font face="Trebuchet MS" size="4" color="#333">Prepare iGEM presentation ppt、poster. </font>
-
          Practice presentation<br>
+
-
          Design gRNA for AmpR<br>
+
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
           </p>
           </p>
         </div>
         </div>
Line 467: Line 464:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
           <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Ligation Clone RFP/pBluescript SK(-)</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extractplasmid clone RFP/pBluescript SK(-)</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Prepare competent cell(JM101)</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
          <p><font face="Trebuchet MS" size="4" color="#333">incubate:</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">1. E.coli DH5α with BBa_I13521(pBluescript)、BBa_K1473001~3003(in pSB1C3 )</font></p>
 +
          <p>&nbsp;</p>
 +
           <p><font face="Trebuchet MS" size="4" color="#333">Extract :</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">1. pSB1C3: BBa_I13521、BBa_K1473001~3003</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Enzyme digestion(PstI、EcoRI) ,確認抽plasmid的成果</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333"> PCR: tracrRNA、Cas 9+crRNA</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Modeling for phage injection </font>
 +
            </p>
 +
          </p>
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Prepare iGEM presentation ppt、poster</font></p>
-
          Practice presentation<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Wiki construction </font></p>
-
           Design gRNA for AmpR<br>
+
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
           </p>
           </p>
         </div>
         </div>
Line 487: Line 490:
         <div align="left">
         <div align="left">
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
+
            <font face="Trebuchet MS" size="4" color="#333">Ligation gRNA/ pSB1C3</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Transformation gRNA/ pSB1C3 to DH5α</font></p>
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Incubate gRNA/ pSB1C3 in E.coli JM101</font></p>
-
            Incubate DH5α with pSB1C3</font></p>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid gRNA/ pSB1C3 in E.coli JM101</font></p>
-
           <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
+
          <p><font face="Trebuchet MS" size="4" color="#333">Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">PCR trRNA、Cas 9+crRNA</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">Prepare modeling</font></p>
 +
          <p><font face="Trebuchet MS" size="4" color="#333">3 new biobrick finished </font>
 +
            </p>
 +
          </p>
           <p>           
           <p>           
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Have a iGEM contest(HP) in Tzu chi university</font></p>
-
           Practice presentation<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Prepare presentation ppt、poster</font></p>
-
           Design gRNA for AmpR<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Wiki construction </font></p>
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
           </p>
           </p>
         </div>
         </div>
Line 506: Line 512:
         <h6 align="left"><font face="Trebuchet MS" size="6" color="#A66B38">Week 15</font><font face="Trebuchet MS" size="6" color="#90B849"> 9/28~10/4</font></h6>
         <h6 align="left"><font face="Trebuchet MS" size="6" color="#A66B38">Week 15</font><font face="Trebuchet MS" size="6" color="#90B849"> 9/28~10/4</font></h6>
         <div align="left">
         <div align="left">
-
          <h5><font face="Trebuchet MS" size="4" color="#0879A6">experimental part:</font></h5>
 
-
          <br>
 
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare for the competent cell</font>
 
-
          <p><font face="Trebuchet MS" size="4" color="#333">BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:<br>
 
-
            Transformation ( Cas9 in pSB1C3 into DH5α)<br>
 
-
            Incubate DH5α with pSB1C3</font></p>
 
-
          <p><font face="Trebuchet MS" size="4" color="#333">Extract plasmid with pSB1C3 from DH5α</font></p>
 
-
          <p>         
 
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
           <h5><font face="Trebuchet MS" size="4" color="#0879A6">other part:</font></h5>
-
           <br>
+
           <p><br>
-
          <font face="Trebuchet MS" size="4" color="#333">Prepare Human practice (ppt)<br>
+
            <font face="Trebuchet MS" size="4" color="#333">Prepare iGEM presentation ppt、poster</font></p>
-
          Practice presentation<br>
+
           <p><font face="Trebuchet MS" size="4" color="#333">Wiki construction </font></p>
-
           Design gRNA for AmpR<br>
+
-
Discuss about project. Project Name is E.Maat for now (came up by Sharon)<br>
+
-
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI) </font>
+
           </p>
           </p>
         </div>
         </div>

Revision as of 14:41, 7 October 2014

 
Notebook
 

Notebook

You should make use of the calendar feature on the wiki and start a lab notebook. This may be looked at by the judges to see how your work progressed throughout the summer. It is a very useful organizational tool as well.

   
Week 1 6/22~6/28

experimental part:

Prepare for the competent cell.

BoBo and Ted decided to multiply plasmid within bacteria but not PCR, like this:
Transformation ( Cas9 in pSB1C3 into DH5α)
Incubate DH5α with pSB1C3

Extract plasmid with pSB1C3 from DH5α.

other part:

Prepare Human practice (ppt).
Practice presentation.
Design gRNA for AmpR.
Discuss about project. Project Name is E.Maat for now (came up by Sharon).
Order restraction enzyme(PstI、EcoRI、XbaI、SpeI).

Week 2 6/29~7/5
experimental part:

Successfully transform biobrick BBa_I13521、BBa_ K914003、BBa_ K1218011 into DH5α (plasmid: pSB1C3
Extract pSB1C3 after incubation
Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 is successfully extracted
Prepared Cm. plate、LB. plate
Prepared competent cell

 

other part:

Get foundation from nearby store (yeah!!!!!)
Decided to have iGEM contest in local school as human practice

Others don’t think E.Maat is a good name, under re-consideration

Week 3 7/6~7/12
experimental part:


Extract plasmid pSB1C3 with BBa_I13521、BBa_ K914003、BBa_ K1218011

Prepare Cm. plate、LB. plate

other part:


Something wrong with gRNA for AmpR, redesign

Second project theme came out by Denise and Regina: Trogene horse. Needs later discuss to decided which one as theme( E.Maat or Trogene Horse)

Try to get foundation from Biotechnology company on e-mail.

Prepare for igem conference in NCTU-Formosa (ppt)

Week 4 7/13~7/19
experimental part:


Incubate E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )

Extract pSB1C3 BBa_I13521、BBa_ K914003、BBa_ K1218011

other part:


Final Theme decided: Trogene Horse

Prepare for igem conference in NCTU-Formosa (ppt)

Designing team logo and project logo

House started working on wiki

Decided to have a synthetic biology contest in National Hualien Girls’ Senior High School

Week 5 7/20~7/26
experimental part:


Incubate:

1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )

2. E.coli top10 with pBluescript II SK (-)

 

Extract :

1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011

2. pBluescript

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted.

other part:


Prepare for igem conference in NCTU-Formosa (ppt)

Designing team logo and project logo

House working on wiki construction

Prepare for the contest in National Hualien Girls’ Senior High School (ppt)

Week 6 7/27~8/2
experimental part:


Incubate:

1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )

2. E.coli top10 with pBluescript II SK (-)

 

Extract :

1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011

2. pBluescript

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted.

other part:


Prepare for igem conference in NCTU-Formosa (ppt).

Have a synthetic biology contest in National Hualien Girls’ Senior High School.

Order primer for gRNA team logo and project logo confirmed.

Week 7 8/3~8/7
Attending iGEM conference in NCTU-Formosa

Week 8 8/10~16
experimental part:


Incubate:

1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )

2. E.coli top10 with pBluescript II SK (-)

 

Extract :

1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011

2. pBluescript

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted.

Purification of RFP sequence from pSB1C3 Prepare Cm. plate、LB. plate

other part:

Team uniform under design.
Week 9 8/17~8/23
experimental part:


Incubate:

1. E.coli DH5α with BBa_I13521、BBa_ K914003、BBa_ K1218011(in pSB1C3 )

2. E.coli top10 with pBluescript II SK (-)

Extract :

1. pSB1C3: BBa_I13521、BBa_ K914003、BBa_ K1218011

2. pBluescript

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted.

Purification of RFP sequence from pSB1C3.

Week 10 8/24~8/30
experimental part:


Ligation of RFP and pBluescript SK(-)

Transformation clone RFP/pBluescript SK(-) to DH5α

Extract plasmid clone RFP/pBluescript SK(-)

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted.

other part:


Design badge as small gift

Order Helper phage for pBluescript SK(-)

Make movie for project introduction of Trogene horse.

Prepare iGEM presentation ppt、poster.

Week 11 8/31~9/6
experimental part:


Incubate:

1. E.coli DH5α with BBa_I13521、(in pSB1C3 )

2. E.coli top10 with pBluescript II SK (-)

Extract :

1. pSB1C3: BBa_I13521

2. pBluescript

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted

Purification of RFP sequence from pSB1C3

Ligation Clone RFP/pBluescript SK(-)to DH5α Store BBa_I13521、BBa_ K914003、BBa_ K1218011、clone RFP/pBluescript SK(-)

other part:


Make movie for project introduction of Trogene.

horse Prepare iGEM presentation ppt、poster.

Week 12 9/7~9/13
experimental part:


Ligation Clone RFP/pBluescript SK(-)

Extract plasmid clone RFP/pBluescript SK(-)

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted

Modeling for phage injection (Thanks for NCTU-Formosa’s help)

other part:

Prepare iGEM presentation ppt、poster.

Week 13 9/14~9/20
experimental part:


Ligation Clone RFP/pBluescript SK(-)

Extractplasmid clone RFP/pBluescript SK(-)

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted

Prepare competent cell(JM101)

incubate:

1. E.coli DH5α with BBa_I13521(pBluescript)、BBa_K1473001~3003(in pSB1C3 )

 

Extract :

1. pSB1C3: BBa_I13521、BBa_K1473001~3003

Enzyme digestion(PstI、EcoRI) ,確認抽plasmid的成果

PCR: tracrRNA、Cas 9+crRNA

Modeling for phage injection

other part:


Prepare iGEM presentation ppt、poster

Wiki construction

Week 14 9/21~9/27
experimental part:


Ligation gRNA/ pSB1C3

Transformation gRNA/ pSB1C3 to DH5α

Incubate gRNA/ pSB1C3 in E.coli JM101

Extract plasmid gRNA/ pSB1C3 in E.coli JM101

Use Enzyme digestion(PstI and EcoRI) to confirm whether pSB1C3 and pBluescript is successfully extracted

PCR trRNA、Cas 9+crRNA

Prepare modeling

3 new biobrick finished

other part:


Have a iGEM contest(HP) in Tzu chi university

Prepare presentation ppt、poster

Wiki construction

Week 15 9/28~10/4
other part:


Prepare iGEM presentation ppt、poster

Wiki construction

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